RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 HMGXB4Q9UGU5 601 aa14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 MAPK8IP1Q9UQF2 711 aa14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 DPYSL4O14531 572 aa14.91□□□□□ -0.02
PDLIM7-211ENST00000504318 TNFRSF10BO14763 440 aa14.91□□□□□ -0.02
PDLIM7-211ENST00000504318 NCAM2O15394 837 aa14.91□□□□□ -0.02
PDLIM7-211ENST00000504318 LAMTOR5O43504 91 aa14.91□□□□□ -0.02
PDLIM7-211ENST00000504318 NR2F2P24468 414 aa14.91□□□□□ -0.02
PDLIM7-211ENST00000504318 HOXC13P31276 330 aa14.91□□□□□ -0.02
PDLIM7-211ENST00000504318 AVPR1AP37288 418 aa14.91□□□□□ -0.02
PDLIM7-211ENST00000504318 CYP27A1Q02318 531 aa14.91□□□□□ -0.02
PDLIM7-211ENST00000504318 FAM160A1Q05DH4 1040 aa14.91□□□□□ -0.02
PDLIM7-211ENST00000504318 TRPC3Q13507 836 aa14.91□□□□□ -0.02
PDLIM7-211ENST00000504318 PNOCQ13519 176 aa14.91□□□□□ -0.02
PDLIM7-211ENST00000504318 TAF12Q16514 161 aa14.91□□□□□ -0.02
PDLIM7-211ENST00000504318 COBLL1Q53SF7 1204 aa14.91□□□□□ -0.02
PDLIM7-211ENST00000504318 NAIF1Q69YI7 327 aaPredicted RBP14.91□□□□□ -0.02
PDLIM7-211ENST00000504318 SPOPLQ6IQ16 392 aa14.91□□□□□ -0.02
PDLIM7-211ENST00000504318 TSSK4Q6SA08 328 aa14.91□□□□□ -0.02
PDLIM7-211ENST00000504318 Q6ZS52 159 aa14.91□□□□□ -0.02
PDLIM7-211ENST00000504318 DENND5BQ6ZUT9 1274 aa14.91□□□□□ -0.02
PDLIM7-211ENST00000504318 YAF2Q8IY57 180 aa14.91□□□□□ -0.02
PDLIM7-211ENST00000504318 SMYD4Q8IYR2 804 aaPredicted RBP14.91□□□□□ -0.02
PDLIM7-211ENST00000504318 ZMIZ2Q8NF64 920 aa14.91□□□□□ -0.02
PDLIM7-211ENST00000504318 TTC8Q8TAM2 541 aa14.91□□□□□ -0.02
PDLIM7-211ENST00000504318 SNX25Q9H3E2 840 aa14.91□□□□□ -0.02
PDLIM7-211ENST00000504318 GKN1Q9NS71 199 aa14.91□□□□□ -0.02
PDLIM7-211ENST00000504318 ATG2BQ96BY7 2078 aa14.91□□□□□ -0.02
PDLIM7-211ENST00000504318 FAM92AA1XBS5 289 aa14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 ZNF840PA6NDX5 716 aa14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 A8MXQ7 604 aa14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 K7ESF4 209 aa14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 TRIM66O15016 1216 aa14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 CALUO43852 315 aaPredicted RBP14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 PAPSS2O95340 614 aaPredicted RBP14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 OAS1P00973 400 aaKnown RBP14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 HLA-DRAP01903 254 aa14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 TRIM49P0CI25 452 aa14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 TRIM49CP0CI26 452 aa14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 ARSAP15289 507 aa14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 VAMP7P51809 220 aa14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 CSTF1Q05048 431 aaKnown RBP14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 BIRC3Q13489 604 aa14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 EDRF1Q3B7T1 1238 aa14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 ZNF667Q5HYK9 610 aa14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 CEP135Q66GS9 1140 aa14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 C1orf228Q6PIY5 440 aa14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 SCARA5Q6ZMJ2 495 aa14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 FAM35AQ86V20 835 aa14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 FUKQ8N0W3 1084 aa14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 ARL14EPQ8N8R7 260 aaPredicted RBP14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 CSGALNACT1Q8TDX6 532 aa14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 EZH1Q92800 747 aaPredicted RBP14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 TWNKQ96RR1 684 aa14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 RNF38Q9H0F5 515 aa14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 EBF3Q9H4W6 596 aa14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 ARHGAP26Q9UNA1 814 aa14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 R3HCC1Q9Y3T6 440 aaKnown RBP14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 PCDHGA2Q9Y5H1 932 aa14.9□□□□□ -0.02
PDLIM7-211ENST00000504318 MYH10P35580 1976 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 EML5Q05BV3 1969 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 TRDMT1O14717 391 aaKnown RBP14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 BEST1O76090 585 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 LMNAP02545 664 aaKnown RBP14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 PFKLP17858 780 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 GRIK1P39086 918 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 SATB1Q01826 763 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 INCA1Q0VD86 236 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 RUNX3Q13761 415 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 MTF1Q14872 753 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 PON2Q15165 354 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 SGSM1Q2NKQ1 1148 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 GAB4Q2WGN9 574 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 EML3Q32P44 896 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 ITPRIPL2Q3MIP1 535 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 TMEM196Q5HYL7 178 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 FSTL4Q6MZW2 842 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 PKN3Q6P5Z2 889 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 ADSSL1Q8N142 457 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 CRYBG2Q8N1P7 616 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 TAS1R2Q8TE23 839 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 WHAMMQ8TF30 809 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 TAF4BQ92750 862 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 KCNK16Q96T55 309 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 SMOQ99835 787 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 ELOVL4Q9GZR5 314 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 FBRSL1Q9HCM7 1045 aaKnown RBP14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 ZSCAN32Q9NX65 697 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 MYOFQ9NZM1 2061 aa14.89□□□□□ -0.03
PDLIM7-211ENST00000504318 PHACTR2O75167 634 aa14.88□□□□□ -0.03
PDLIM7-211ENST00000504318 USP17L7P0C7H9 530 aa14.88□□□□□ -0.03
PDLIM7-211ENST00000504318 ZDHHC11BP0C7U3 371 aa14.88□□□□□ -0.03
PDLIM7-211ENST00000504318 CHRM1P11229 460 aaPredicted RBP14.88□□□□□ -0.03
PDLIM7-211ENST00000504318 PRCPP42785 496 aa14.88□□□□□ -0.03
PDLIM7-211ENST00000504318 PGFP49763 221 aa14.88□□□□□ -0.03
PDLIM7-211ENST00000504318 KPNA1P52294 538 aaPredicted RBP14.88□□□□□ -0.03
PDLIM7-211ENST00000504318 PMS1P54277 932 aaKnown RBP14.88□□□□□ -0.03
PDLIM7-211ENST00000504318 SLC7A9P82251 487 aa14.88□□□□□ -0.03
PDLIM7-211ENST00000504318 DMWDQ09019 674 aa14.88□□□□□ -0.03
PDLIM7-211ENST00000504318 SNX30Q5VWJ9 437 aa14.88□□□□□ -0.03
PDLIM7-211ENST00000504318 ZC3H14Q6PJT7 736 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms