RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 TMEM199Q8N511 208 aa7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 EMC1Q8N766 993 aa7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 MYCBPAPQ8TBZ2 947 aa7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 STK32AQ8WU08 396 aa7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 BADQ92934 168 aa7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 C18orf8Q96DM3 657 aa7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 CAPZA3Q96KX2 299 aa7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 MCEEQ96PE7 176 aa7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 FAM193BQ96PV7 902 aaPredicted RBP7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 ACBD6Q9BR61 282 aa7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 TMEM175Q9BSA9 504 aa7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 DUSP16Q9BY84 665 aa7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 MRPL9Q9BYD2 267 aaKnown RBP7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 ADAM33Q9BZ11 813 aa7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 RAB6CQ9H0N0 254 aa7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 IL23AQ9NPF7 189 aa7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 METTL5Q9NRN9 209 aaKnown RBP7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 KRT82Q9NSB4 513 aa7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 PARVAQ9NVD7 372 aa7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 CXXC1Q9P0U4 656 aaPredicted RBP7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 TMEM59LQ9UK28 342 aa7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 DSEQ9UL01 958 aa7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 STRIP2Q9ULQ0 834 aa7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 CEP83Q9Y592 693 aa7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 MRPL42Q9Y6G3 142 aaKnown RBP7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 SCINQ9Y6U3 715 aa7.28□□□□□ -1.24
TOPBP1-203ENST00000503464 C2CD4BA6NLJ0 364 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 F8VP50 259 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 XPO1O14980 1071 aaKnown RBP7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 SYN3O14994 580 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 BAIAP3O94812 1187 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 AMHP03971 560 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 NPR3P17342 541 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 TCP1P17987 556 aaKnown RBP7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 CTNNA2P26232 953 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 PCSK1P29120 753 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 MAN1A1P33908 653 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 FLT3P36888 993 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 YWHAHQ04917 246 aaPredicted RBP7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 WHAMMP3Q1A5X7 153 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 FAM171A1Q5VUB5 890 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 OTUD1Q5VV17 481 aaPredicted RBP7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 TXNRD3NBQ6F5E7 133 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 AADACL2Q6P093 401 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 FAM117BQ6P1L5 589 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 FUT10Q6P4F1 479 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 CYP4V2Q6ZWL3 525 aaPredicted RBP7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 ZNF365Q70YC5 407 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 RSRC2Q7L4I2 434 aaKnown RBP7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 OTOP2Q7RTS6 562 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 ANKS1BQ7Z6G8 1248 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 C7orf61Q8IZ16 206 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 RASGEF1CQ8N431 466 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 TTC9BQ8N6N2 239 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 NIPA2Q8N8Q9 360 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 NOA1Q8NC60 698 aaKnown RBP7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 NDRG1Q92597 394 aaKnown RBP7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 CALR3Q96L12 384 aaKnown RBP7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 KCNK16Q96T55 309 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 HERPUD2Q9BSE4 406 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 ZCWPW1Q9H0M4 648 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 CSNK1G1Q9HCP0 422 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 MRPL47Q9HD33 250 aaKnown RBP7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 ST7Q9NRC1 585 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 HESX1Q9UBX0 185 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 AMFRQ9UKV5 643 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 FAN1Q9Y2M0 1017 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 V9GYY5 206 aaPredicted RBP7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 OBSL1O75147 1896 aa7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 SF3B1O75533 1304 aaKnown RBP eCLIP7.27□□□□□ -1.25
TOPBP1-203ENST00000503464 UQCRHLA0A096LP55 91 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 MYO1FO00160 1098 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 CES2O00748 559 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 KCNK3O14649 394 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 ADAM12O43184 909 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 TADA2AO75478 443 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 GRAP2O75791 330 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 AP1G2O75843 785 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 ALDH2P05091 517 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 UQCRHP07919 91 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 FAM200BP0CF97 657 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 KRT3P12035 628 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 LCP1P13796 627 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 SYN1P17600 705 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 TFE3P19532 575 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 NDUFV1P49821 464 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 TERF1P54274 439 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 MAP3K7CLP57077 242 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 HTRA4P83105 476 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 SLC6A3Q01959 620 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 SLC25A11Q02978 314 aaKnown RBP7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 FPGSQ05932 587 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 ADIGQ0VDE8 80 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 ZNF211Q13398 564 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 TUBB2AQ13885 445 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 SLC39A12Q504Y0 691 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 RAB41Q5JT25 222 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 TMEM240Q5SV17 173 aa7.26□□□□□ -1.25
TOPBP1-203ENST00000503464 FAM102AQ5T9C2 384 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms