RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 HSD11B2P80365 405 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 PIGFQ07326 219 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 ZNF844Q08AG5 666 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 ZNF543Q08ER8 600 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 RAB32Q13637 225 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 PTPRRQ15256 657 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 AMOTQ4VCS5 1084 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 SLC44A4Q53GD3 710 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 LMBRD2Q68DH5 695 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 ZNF626Q68DY1 528 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 VWA1Q6PCB0 445 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 SLC30A10Q6XR72 485 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 SKAP1Q86WV1 359 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 KRT73Q86Y46 540 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 LIX1LQ8IVB5 337 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 CFAP52Q8N1V2 620 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 MPP5Q8N3R9 675 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 SLC15A4Q8N697 577 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 DNAJC5GQ8N7S2 189 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 ACRBPQ8NEB7 543 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 FAM46DQ8NEK8 389 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 NMD3Q96D46 503 aaKnown RBP2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 RIPOR3Q96MK2 946 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 SMOQ99835 787 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 ZSWIM1Q9BR11 485 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 CNPPD1Q9BV87 410 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 DPH1Q9BZG8 443 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 UNKQ9C0B0 810 aaKnown RBP2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 SMURF2Q9HAU4 748 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 PNPLA8Q9NP80 782 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 NRIP3Q9NQ35 241 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 MRPS18AQ9NVS2 196 aaKnown RBP2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 VSX1Q9NZR4 365 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 COL20A1Q9P218 1284 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 HSFX1Q9UBD0 423 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 TMX2Q9Y320 296 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 DAAM1Q9Y4D1 1078 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 PLEKHM1Q9Y4G2 1056 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 COMMD10Q9Y6G5 202 aa2.97□□□□□ -1.93
HMGB1P35-201ENST00000503360 A0A087WWL8 130 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 TRIM43BA6NCK2 446 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 TMEM233B4DJY2 109 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 RASA4BC9J798 803 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 YY2O15391 372 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 RASA4O43374 803 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 LDHAP00338 332 aaKnown RBP2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 PARP1P09874 1014 aaKnown RBP2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 TNFSF4P23510 183 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 HTR3AP46098 478 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 POU6F2P78424 691 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 GRM1Q13255 1194 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 DAG1Q14118 895 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 MORC3Q14149 939 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 FAM209BQ5JX69 171 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 KLHDC7AQ5VTJ3 777 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 FAM160B1Q5W0V3 765 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 KAZNQ674X7 775 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 AWAT2Q6E213 333 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 SUMO4Q6EEV6 95 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 TAPT1Q6NXT6 567 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 XRRA1Q6P2D8 792 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 TOGARAM2Q6ZUX3 1019 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 PPP1R32Q7Z5V6 425 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 TECPR1Q7Z6L1 1165 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 DPP9Q86TI2 863 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 MICU3Q86XE3 530 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 ZDHHC17Q8IUH5 632 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 SAMD14Q8IZD0 417 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 SPICE1Q8N0Z3 855 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 CCDC33Q8N5R6 958 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 OR2C3Q8N628 320 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 OR56A3Q8NH54 315 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 SSH3Q8TE77 659 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 TRIM43Q96BQ3 446 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 LRIG1Q96JA1 1093 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 MSLNLQ96KJ4 702 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 SGCZQ96LD1 299 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 TRIB1Q96RU8 372 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 PSMD1Q99460 953 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 STK31Q9BXU1 1019 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 ZNF518BQ9C0D4 1074 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 A1CFQ9NQ94 594 aaKnown RBP2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 WWOXQ9NZC7 414 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 XPR1Q9UBH6 696 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 TAGLN3Q9UI15 199 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 MTO1Q9Y2Z2 717 aaKnown RBP2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 LRP12Q9Y561 859 aa2.96□□□□□ -1.94
HMGB1P35-201ENST00000503360 CCDC195A0A1B0GUA6 201 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 PYCARD-AS1I3L0S3 204 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 TOR1BO14657 336 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 APOL1O14791 398 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 TPD52L2O43399 206 aaKnown RBP2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 NCK2O43639 380 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 TSHRP16473 764 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 CHRM3P20309 590 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 MAPK10P53779 464 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 TFF2Q03403 129 aa2.95□□□□□ -1.94
HMGB1P35-201ENST00000503360 TCF15Q12870 199 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms