RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 EPG5Q9HCE0 2579 aa6.53□□□□□ -1.36
LSM3P4-201ENST00000502948 ZNF840PA6NDX5 716 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 UPK3BL1B0FP48 263 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 UPK3BL2E5RIL1 263 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 K7EQS6 105 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 KCNK5O95279 499 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 TNNC2P02585 160 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 CHRM1P11229 460 aaPredicted RBP6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 CEACAM1P13688 526 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 ARSAP15289 507 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 SYT1P21579 422 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 OPRD1P41143 372 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 TNFRSF4P43489 277 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 GPR15P49685 360 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 CASP5P51878 434 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 AP3M2P53677 418 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 CLDN10P78369 228 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 AMPD3Q01432 767 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 EHHADHQ08426 723 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 RESTQ13127 1097 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 BYSLQ13895 437 aaKnown RBP6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 E2F4Q16254 413 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 CRY1Q16526 586 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 DDR2Q16832 855 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 BMT2Q1RMZ1 405 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 GAB4Q2WGN9 574 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 DAB2IPQ5VWQ8 1189 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 LMBRD2Q68DH5 695 aaPredicted RBP6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 RPLP0P6Q8NHW5 317 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 TTC8Q8TAM2 541 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 SH3RF2Q8TEC5 729 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 SAAL1Q96ER3 474 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 PCED1BQ96HM7 432 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 SLC22A12Q96S37 553 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 CYP2S1Q96SQ9 504 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 SYT15Q9BQS2 421 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 MTMR12Q9C0I1 747 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 ELOVL4Q9GZR5 314 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 PDE11AQ9HCR9 933 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 CRTAC1Q9NQ79 661 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 RXFP3Q9NSD7 469 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 TRPM5Q9NZQ8 1165 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 MAGED2Q9UNF1 606 aaPredicted RBP6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 WASF3Q9UPY6 502 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 STARD13Q9Y3M8 1113 aa6.52□□□□□ -1.37
LSM3P4-201ENST00000502948 CNOT1A5YKK6 2376 aaKnown RBP6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 E2F8A0AVK6 867 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 LNP1A1A4G5 178 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 C2orf78A6NCI8 922 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 TMEM8BA6NDV4 472 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 LEFTY2O00292 366 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 TNFRSF10BO14763 440 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 KHNYNO15037 678 aaKnown RBP6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 ALDH1A2O94788 518 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 RTN3O95197 1032 aaPredicted RBP6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 CAVIN2O95810 425 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 KRT19P08727 400 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 ZDHHC11BP0C7U3 371 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 ACAT1P24752 427 aaKnown RBP6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 LMO2P25791 158 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 ANXA13P27216 316 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 HOXD13P35453 343 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 GNL1P36915 607 aaPredicted RBP6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 GRIK1P39086 918 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 STAT6P42226 847 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 GRIA2P42262 883 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 PI4KAP42356 2102 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 ZXDBP98169 803 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 LMAN2Q12907 356 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 PSMD6Q15008 389 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 SF3A2Q15428 464 aaKnown RBP6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 SNRNP35Q16560 246 aaKnown RBP6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 EOGTQ5NDL2 527 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 N4BP2L1Q5TBK1 243 aaPredicted RBP6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 RNF43Q68DV7 783 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 SLC23A3Q6PIS1 610 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 NUDT18Q6ZVK8 323 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 TRAPPC11Q7Z392 1133 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 TRMT11Q7Z4G4 463 aaKnown RBP6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 RABEPKQ7Z6M1 372 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 GPIHBP1Q8IV16 184 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 ABCA7Q8IZY2 2146 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 NUP93Q8N1F7 819 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 ZNF276Q8N554 614 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 ARL14EPQ8N8R7 260 aaPredicted RBP6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 KDF1Q8NAX2 398 aaPredicted RBP6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 ZSWIM2Q8NEG5 633 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 TSTD1Q8NFU3 115 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 OR5B17Q8NGF7 314 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 MYLPFQ96A32 169 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 SLITRK1Q96PX8 696 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 PNKPQ96T60 521 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 C7orf25Q9BPX7 421 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 TRIM9Q9C026 710 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 POLMQ9NP87 494 aaPredicted RBP6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 HSPBP1Q9NZL4 362 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 WNT6Q9Y6F9 365 aa6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 MYO18AQ92614 2054 aaKnown RBP6.51□□□□□ -1.37
LSM3P4-201ENST00000502948 MYOFQ9NZM1 2061 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms