RNA–Protein interactions for RNA: ENST00000502840.5

CDC42SE2-205, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-205ENST00000502840 TNMDQ9H2S6 317 aa3.54□□□□□ -1.84
CDC42SE2-205ENST00000502840 IKZF4Q9H2S9 585 aa3.54□□□□□ -1.84
CDC42SE2-205ENST00000502840 KLHL11Q9NVR0 708 aa3.54□□□□□ -1.84
CDC42SE2-205ENST00000502840 USP25Q9UHP3 1055 aa3.54□□□□□ -1.84
CDC42SE2-205ENST00000502840 FAM50BQ9Y247 325 aa3.54□□□□□ -1.84
CDC42SE2-205ENST00000502840 RUVBL1Q9Y265 456 aaKnown RBP3.54□□□□□ -1.84
CDC42SE2-205ENST00000502840 REXO2Q9Y3B8 237 aaKnown RBP3.54□□□□□ -1.84
CDC42SE2-205ENST00000502840 PCDHGB6Q9Y5F9 930 aa3.54□□□□□ -1.84
CDC42SE2-205ENST00000502840 USP16Q9Y5T5 823 aa3.54□□□□□ -1.84
CDC42SE2-205ENST00000502840 ACTL7AQ9Y615 435 aa3.54□□□□□ -1.84
CDC42SE2-205ENST00000502840 CAPN8A6NHC0 703 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 BECN2A8MW95 431 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 CXorf49A8MYA2 514 aaPredicted RBP3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 GOLGA6L19H0YKK7 550 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 GOLIM4O00461 696 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 LARGE1O95461 756 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 TPM3P06753 285 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 HOXB7P09629 217 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 IFIT1P09914 478 aaKnown RBP3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 CCDC192P0DO97 292 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 RAP2AP10114 183 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 NR4A1P22736 598 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 PRDX5P30044 214 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 PTGS2P35354 604 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 HTR3AP46098 478 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 INHBCP55103 352 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 GUCY1B3Q02153 619 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 APBA1Q02410 837 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 KRT32Q14532 448 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 ME3Q16798 604 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 TPD52L1Q16890 204 aaPredicted RBP3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 CCDC158Q5M9N0 1113 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 DACT2Q5SW24 774 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 EMC10Q5UCC4 262 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 AFMIDQ63HM1 303 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 ANKS6Q68DC2 871 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 CCDC149Q6ZUS6 474 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 SEM1Q6ZVN7 128 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 CHST3Q7LGC8 479 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 GPRIN1Q7Z2K8 1008 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 UBE3BQ7Z3V4 1068 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 MRGPREQ86SM8 312 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 DAAM2Q86T65 1068 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 ULK2Q8IYT8 1036 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 SPICE1Q8N0Z3 855 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 OR52N2Q8NGI0 321 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 IL31RAQ8NI17 732 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 SLC25A43Q8WUT9 341 aaPredicted RBP3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 STON2Q8WXE9 905 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 MTFMTQ96DP5 389 aaKnown RBP3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 SLC35A4Q96G79 324 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 FAM167AQ96KS9 214 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 RPS6KC1Q96S38 1066 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 SEC62Q99442 399 aaKnown RBP3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 MYOCQ99972 504 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 NUP62CLQ9H1M0 184 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 IL25Q9H293 177 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 EPC1Q9H2F5 836 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 NRDE2Q9H7Z3 1164 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 TTC12Q9H892 705 aaPredicted RBP3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 FEZ2Q9UHY8 353 aaPredicted RBP3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 TPCN1Q9ULQ1 816 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 PHTF1Q9UMS5 762 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 NOL7Q9UMY1 257 aaKnown RBP3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 PCDHA3Q9Y5H8 950 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 CDC42BPGQ6DT37 1551 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 KIF20BQ96Q89 1820 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 MYO5BQ9ULV0 1848 aa3.53□□□□□ -1.84
CDC42SE2-205ENST00000502840 PTPRUQ92729 1446 aa3.53□□□□□ -1.85
CDC42SE2-205ENST00000502840 CCDC171Q6TFL3 1326 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 RAD50Q92878 1312 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 A0A0D9SFI3 127 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 B5MCH6 92 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 CPLX1O14810 134 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 TBX3O15119 743 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 RRP9O43818 475 aaKnown RBP3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 MATN4O95460 622 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 A1BGP04217 495 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 CD1AP06126 327 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 ATP5JP18859 108 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 RPS6KB1P23443 525 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 ZFP36P26651 326 aaKnown RBP3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 PEX2P28328 305 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 SMARCA1P28370 1054 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 MCM5P33992 734 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 CASP5P51878 434 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 PTTG1IPP53801 180 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 GCKRQ14397 625 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 STK38Q15208 465 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 VPS72Q15906 364 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 ATP2B3Q16720 1220 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 CCDC57Q2TAC2 916 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 MCMDC2Q4G0Z9 681 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 FAM47AQ5JRC9 791 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 EPHA10Q5JZY3 1008 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 XRRA1Q6P2D8 792 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 ZNF790Q6PG37 636 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 SYNE3Q6ZMZ3 975 aa3.52□□□□□ -1.85
CDC42SE2-205ENST00000502840 FAM83AQ86UY5 434 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms