RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 TFAP2BQ92481 460 aa26.61■■□□□ 1.85
LSM6-202ENST00000502781 LSM14BQ9BX40 385 aaKnown RBP26.61■■□□□ 1.85
LSM6-202ENST00000502781 DUSP16Q9BY84 665 aa26.61■■□□□ 1.85
LSM6-202ENST00000502781 RTN4Q9NQC3 1192 aaKnown RBP26.61■■□□□ 1.85
LSM6-202ENST00000502781 O00370 1275 aa26.6■■□□□ 1.85
LSM6-202ENST00000502781 TNFRSF10BO14763 440 aa26.6■■□□□ 1.85
LSM6-202ENST00000502781 LAMP2P13473 410 aa26.6■■□□□ 1.85
LSM6-202ENST00000502781 UCHL3P15374 230 aa26.6■■□□□ 1.85
LSM6-202ENST00000502781 CEBPBP17676 345 aa26.6■■□□□ 1.85
LSM6-202ENST00000502781 GBP2P32456 591 aaPredicted RBP26.6■■□□□ 1.85
LSM6-202ENST00000502781 UBXN1Q04323 297 aa26.6■■□□□ 1.85
LSM6-202ENST00000502781 TAF12Q16514 161 aa26.6■■□□□ 1.85
LSM6-202ENST00000502781 ARHGAP44Q17R89 818 aa26.6■■□□□ 1.85
LSM6-202ENST00000502781 ZSWIM1Q9BR11 485 aa26.6■■□□□ 1.85
LSM6-202ENST00000502781 GANQ9H2C0 597 aa26.6■■□□□ 1.85
LSM6-202ENST00000502781 PNPLA8Q9NP80 782 aa26.6■■□□□ 1.85
LSM6-202ENST00000502781 GDE1Q9NZC3 331 aa26.6■■□□□ 1.85
LSM6-202ENST00000502781 IL37Q9NZH6 218 aa26.6■■□□□ 1.85
LSM6-202ENST00000502781 A0A1B0GTH6 734 aa26.59■■□□□ 1.85
LSM6-202ENST00000502781 F11P03951 625 aa26.59■■□□□ 1.85
LSM6-202ENST00000502781 CD19P15391 556 aa26.59■■□□□ 1.85
LSM6-202ENST00000502781 NPR3P17342 541 aa26.59■■□□□ 1.85
LSM6-202ENST00000502781 GABRR2P28476 465 aa26.59■■□□□ 1.85
LSM6-202ENST00000502781 CDC25CP30307 473 aa26.59■■□□□ 1.85
LSM6-202ENST00000502781 KLK7P49862 253 aa26.59■■□□□ 1.85
LSM6-202ENST00000502781 USP46P62068 366 aa26.59■■□□□ 1.85
LSM6-202ENST00000502781 TPM4P67936 248 aa26.59■■□□□ 1.85
LSM6-202ENST00000502781 SYCP1Q15431 976 aa26.59■■□□□ 1.85
LSM6-202ENST00000502781 ANKRD52Q8NB46 1076 aa26.59■■□□□ 1.85
LSM6-202ENST00000502781 ING5Q8WYH8 240 aa26.59■■□□□ 1.85
LSM6-202ENST00000502781 GPR88Q9GZN0 384 aa26.59■■□□□ 1.85
LSM6-202ENST00000502781 UXTQ9UBK9 157 aaPredicted RBP26.59■■□□□ 1.85
LSM6-202ENST00000502781 DAAM1Q9Y4D1 1078 aa26.59■■□□□ 1.85
LSM6-202ENST00000502781 FHOD1Q9Y613 1164 aa26.59■■□□□ 1.85
LSM6-202ENST00000502781 A0A1W2PRU2 124 aa26.58■■□□□ 1.85
LSM6-202ENST00000502781 HHLA1C9JL84 531 aa26.58■■□□□ 1.85
LSM6-202ENST00000502781 KRT5P13647 590 aa26.58■■□□□ 1.85
LSM6-202ENST00000502781 MAP3K7CLP57077 242 aa26.58■■□□□ 1.85
LSM6-202ENST00000502781 TTC30AQ86WT1 665 aa26.58■■□□□ 1.85
LSM6-202ENST00000502781 NUP93Q8N1F7 819 aa26.58■■□□□ 1.85
LSM6-202ENST00000502781 NAP1L5Q96NT1 182 aaPredicted RBP26.58■■□□□ 1.85
LSM6-202ENST00000502781 TSPAN16Q9UKR8 245 aa26.58■■□□□ 1.85
LSM6-202ENST00000502781 MAGED2Q9UNF1 606 aaPredicted RBP26.58■■□□□ 1.85
LSM6-202ENST00000502781 FAM92AA1XBS5 289 aa26.58■■□□□ 1.84
LSM6-202ENST00000502781 GOLGA6L19H0YKK7 550 aa26.58■■□□□ 1.84
LSM6-202ENST00000502781 TEX33O43247 280 aa26.58■■□□□ 1.84
LSM6-202ENST00000502781 TADA3O75528 432 aa26.58■■□□□ 1.84
LSM6-202ENST00000502781 GJA1P17302 382 aa26.58■■□□□ 1.84
LSM6-202ENST00000502781 STILQ15468 1287 aa26.58■■□□□ 1.84
LSM6-202ENST00000502781 TEAD2Q15562 447 aa26.58■■□□□ 1.84
LSM6-202ENST00000502781 CNGA2Q16280 664 aa26.58■■□□□ 1.84
LSM6-202ENST00000502781 PKDCCQ504Y2 493 aa26.58■■□□□ 1.84
LSM6-202ENST00000502781 LCLAT1Q6UWP7 414 aa26.58■■□□□ 1.84
LSM6-202ENST00000502781 EHD2Q9NZN4 543 aa26.58■■□□□ 1.84
LSM6-202ENST00000502781 FOXN3O00409 490 aaPredicted RBP26.57■■□□□ 1.84
LSM6-202ENST00000502781 EPHB6O15197 1021 aa26.57■■□□□ 1.84
LSM6-202ENST00000502781 RTN3O95197 1032 aaPredicted RBP26.57■■□□□ 1.84
LSM6-202ENST00000502781 SSTR3P32745 418 aaPredicted RBP26.57■■□□□ 1.84
LSM6-202ENST00000502781 SLC5A3P53794 718 aa26.57■■□□□ 1.84
LSM6-202ENST00000502781 DRAP1Q14919 205 aaPredicted RBP26.57■■□□□ 1.84
LSM6-202ENST00000502781 FAM71AQ8IYT1 594 aa26.57■■□□□ 1.84
LSM6-202ENST00000502781 COL25A1Q9BXS0 654 aaPredicted RBP26.57■■□□□ 1.84
LSM6-202ENST00000502781 UBXN6Q9BZV1 441 aa26.57■■□□□ 1.84
LSM6-202ENST00000502781 ATXN3LQ9H3M9 355 aa26.57■■□□□ 1.84
LSM6-202ENST00000502781 FAM207AQ9NSI2 230 aaPredicted RBP26.57■■□□□ 1.84
LSM6-202ENST00000502781 COMMD8Q9NX08 183 aa26.57■■□□□ 1.84
LSM6-202ENST00000502781 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.57■■□□□ 1.84
LSM6-202ENST00000502781 GREB1Q4ZG55 1949 aa26.56■■□□□ 1.84
LSM6-202ENST00000502781 ANHXE9PGG2 379 aa26.56■■□□□ 1.84
LSM6-202ENST00000502781 CALCAP01258 141 aa26.56■■□□□ 1.84
LSM6-202ENST00000502781 BRD2P25440 801 aaKnown RBP26.56■■□□□ 1.84
LSM6-202ENST00000502781 FANCCQ00597 558 aa26.56■■□□□ 1.84
LSM6-202ENST00000502781 GOLGA7BQ2TAP0 167 aa26.56■■□□□ 1.84
LSM6-202ENST00000502781 FILIP1LQ4L180 1135 aa26.56■■□□□ 1.84
LSM6-202ENST00000502781 MCRS1Q96EZ8 462 aa26.56■■□□□ 1.84
LSM6-202ENST00000502781 STK33Q9BYT3 514 aa26.56■■□□□ 1.84
LSM6-202ENST00000502781 LIMD1Q9UGP4 676 aa26.56■■□□□ 1.84
LSM6-202ENST00000502781 BCAT1P54687 386 aa26.55■■□□□ 1.84
LSM6-202ENST00000502781 NR1I3Q14994 352 aa26.55■■□□□ 1.84
LSM6-202ENST00000502781 RNF135Q8IUD6 432 aa26.55■■□□□ 1.84
LSM6-202ENST00000502781 SCAMP5Q8TAC9 235 aa26.55■■□□□ 1.84
LSM6-202ENST00000502781 ZSWIM3Q96MP5 696 aa26.55■■□□□ 1.84
LSM6-202ENST00000502781 ACP6Q9NPH0 428 aa26.55■■□□□ 1.84
LSM6-202ENST00000502781 A0A1W2PQC6 194 aa26.54■■□□□ 1.84
LSM6-202ENST00000502781 SOBPA7XYQ1 873 aa26.54■■□□□ 1.84
LSM6-202ENST00000502781 SERPINC1P01008 464 aa26.54■■□□□ 1.84
LSM6-202ENST00000502781 YWHAQP27348 245 aa26.54■■□□□ 1.84
LSM6-202ENST00000502781 CLCN1P35523 988 aa26.54■■□□□ 1.84
LSM6-202ENST00000502781 CYP4F8P98187 520 aa26.54■■□□□ 1.84
LSM6-202ENST00000502781 BST2Q10589 180 aaKnown RBP26.54■■□□□ 1.84
LSM6-202ENST00000502781 RAPGEF1Q13905 1077 aa26.54■■□□□ 1.84
LSM6-202ENST00000502781 MEA1Q16626 185 aa26.54■■□□□ 1.84
LSM6-202ENST00000502781 STXBP5Q5T5C0 1151 aa26.54■■□□□ 1.84
LSM6-202ENST00000502781 GPRIN1Q7Z2K8 1008 aa26.54■■□□□ 1.84
LSM6-202ENST00000502781 GCNAQ96QF7 691 aa26.54■■□□□ 1.84
LSM6-202ENST00000502781 HESX1Q9UBX0 185 aa26.54■■□□□ 1.84
LSM6-202ENST00000502781 ZMYM5Q9UJ78 669 aa26.54■■□□□ 1.84
LSM6-202ENST00000502781 BDP1A6H8Y1 2624 aa26.53■■□□□ 1.84
LSM6-202ENST00000502781 CYP26A1O43174 497 aa26.53■■□□□ 1.84
LSM6-202ENST00000502781 PNMA6AP0CW24 399 aaPredicted RBP26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms