RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	HESX1	Q9UBX0	185 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	GUCA1B	Q9UMX6	200 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	COG5	Q9UP83	839 aa		12.84	□□□□□ -0.35
MATR3-231	ENST00000502394	FAM170A	A1A519	330 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	LINC01553	A4QN01	128 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	HHLA1	C9JL84	531 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	LILRB3	O75022	631 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	BEST1	O76090	585 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	VNN2	O95498	520 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	ERBB2	P04626	1255 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	CALB1	P05937	261 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	OR4Q2	P0C623	313 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	RRM1	P23921	792 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	CACNA2D1	P54289	1103 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	CFAP221	Q4G0U5	840 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	C2CD6	Q53TS8	623 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	SLC8B1	Q6J4K2	584 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	LLGL2	Q6P1M3	1020 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	ERICH1	Q86X53	443 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	CEP57	Q86XR8	500 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	XYLT1	Q86Y38	959 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	RHOT2	Q8IXI1	618 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	DCP1B	Q8IZD4	617 aa	Known RBP	12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	SLC35G2	Q8TBE7	412 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	KCTD13	Q8WZ19	329 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	MCRS1	Q96EZ8	462 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	FUBP3	Q96I24	572 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	HSFY1	Q96LI6	401 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	RNPC3	Q96LT9	517 aa	Known RBP	12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	UBXN6	Q9BZV1	441 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	ZBP1	Q9H171	429 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	OSGEP	Q9NPF4	335 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	KRT82	Q9NSB4	513 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	UVRAG	Q9P2Y5	699 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	STK39	Q9UEW8	545 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	CNOT8	Q9UFF9	292 aa	Known RBP	12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	PAXBP1	Q9Y5B6	917 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	PCDHB12	Q9Y5F1	795 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	PCDHGC5	Q9Y5F6	944 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	CAPN6	Q9Y6Q1	641 aa		12.83	□□□□□ -0.36
MATR3-231	ENST00000502394	MACROD2	A1Z1Q3	448 aa		12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	C5orf67	F2Z3F1	127 aa		12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	AP1G2	O75843	785 aa		12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	FGF18	O76093	207 aa		12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	MOCS3	O95396	460 aa		12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	FAM200B	P0CF97	657 aa		12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	BMPR1A	P36894	532 aa		12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	GLUD2	P49448	558 aa		12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	RABGGTB	P53611	331 aa		12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	ETF1	P62495	437 aa	Known RBP	12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	GPR17	Q13304	367 aa		12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	ZNF268	Q14587	947 aa	Predicted RBP	12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	PTPN14	Q15678	1187 aa		12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	NFE2	Q16621	373 aa	Predicted RBP	12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	RAB41	Q5JT25	222 aa		12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	LIN9	Q5TKA1	542 aa		12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	PRSS55	Q6UWB4	352 aa	Predicted RBP	12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	C4orf50	Q6ZRC1	276 aa		12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	LRRC57	Q8N9N7	239 aa		12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	C3orf20	Q8ND61	904 aa		12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	TPCN2	Q8NHX9	752 aa		12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	RIN2	Q8WYP3	895 aa	Predicted RBP	12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	C18orf8	Q96DM3	657 aa		12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	SMARCD1	Q96GM5	515 aa		12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	C16orf45	Q96MC5	204 aa	Predicted RBP	12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	NOX5	Q96PH1	765 aa		12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	PLVAP	Q9BX97	442 aa		12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	RHOBTB2	Q9BYZ6	727 aa		12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	RRAGD	Q9NQL2	400 aa	Predicted RBP	12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	WDR35	Q9P2L0	1181 aa		12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	CHORDC1	Q9UHD1	332 aa	Predicted RBP	12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	LZTS1	Q9Y250	596 aa		12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	RWDD3	Q9Y3V2	267 aa		12.82	□□□□□ -0.36
MATR3-231	ENST00000502394	GRID2IP	A4D2P6	1211 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	MTMR11	A4FU01	709 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	GRXCR1	A8MXD5	290 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394		E5RJQ4	531 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	KIF2A	O00139	706 aa	Predicted RBP	12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	ADAM12	O43184	909 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	PAPSS1	O43252	624 aa	Predicted RBP	12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	BUB1	O43683	1085 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	KIF5C	O60282	957 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	TUBB4A	P04350	444 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	CTSA	P10619	480 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	SCNN1A	P37088	669 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	MAGEA11	P43364	429 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	RGS19	P49795	217 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	RGS7	P49802	495 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	SMARCB1	Q12824	385 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	MAMLD1	Q13495	774 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	PSMD5	Q16401	504 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	SLC39A12	Q504Y0	691 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	CYP4A22	Q5TCH4	519 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	SPRED2	Q7Z698	418 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	SLFN11	Q7Z7L1	901 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	PIGZ	Q86VD9	579 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	VPS52	Q8N1B4	723 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	SLC35F6	Q8N357	371 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	KLHL23	Q8NBE8	558 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	MSANTD4	Q8NCY6	345 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms