RNA–Protein interactions for RNA: ENST00000498544.5

ECHDC2-220, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 2

Gene ECHDC2, Length 985 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-220ENST00000498544 SPTBN5Q9NRC6 3674 aaKnown RBP18.66■□□□□ 0.58
ECHDC2-220ENST00000498544 THAP12O43422 761 aa18.65■□□□□ 0.58
ECHDC2-220ENST00000498544 MBTPS2O43462 519 aa18.65■□□□□ 0.58
ECHDC2-220ENST00000498544 SETSIPP0DME0 302 aa18.65■□□□□ 0.58
ECHDC2-220ENST00000498544 PDE6CP51160 858 aa18.65■□□□□ 0.58
ECHDC2-220ENST00000498544 EPHA5P54756 1037 aa18.65■□□□□ 0.58
ECHDC2-220ENST00000498544 TFF2Q03403 129 aa18.65■□□□□ 0.58
ECHDC2-220ENST00000498544 BST2Q10589 180 aaKnown RBP18.65■□□□□ 0.58
ECHDC2-220ENST00000498544 TRIM14Q14142 442 aa18.65■□□□□ 0.58
ECHDC2-220ENST00000498544 SLC47A2Q86VL8 602 aa18.65■□□□□ 0.58
ECHDC2-220ENST00000498544 VSTM4Q8IW00 320 aa18.65■□□□□ 0.58
ECHDC2-220ENST00000498544 ZMIZ2Q8NF64 920 aa18.65■□□□□ 0.58
ECHDC2-220ENST00000498544 GPR152Q8TDT2 470 aa18.65■□□□□ 0.58
ECHDC2-220ENST00000498544 ZNF606Q8WXB4 792 aa18.65■□□□□ 0.58
ECHDC2-220ENST00000498544 BAP1Q92560 729 aa18.65■□□□□ 0.58
ECHDC2-220ENST00000498544 TRMT2BQ96GJ1 504 aaKnown RBP18.65■□□□□ 0.58
ECHDC2-220ENST00000498544 KCNK16Q96T55 309 aa18.65■□□□□ 0.58
ECHDC2-220ENST00000498544 AVENQ9NQS1 362 aaPredicted RBP18.65■□□□□ 0.58
ECHDC2-220ENST00000498544 ASAH2Q9NR71 780 aa18.65■□□□□ 0.58
ECHDC2-220ENST00000498544 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.65■□□□□ 0.58
ECHDC2-220ENST00000498544 GRXCR2A6NFK2 248 aa18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 M0QYV0 167 aa18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 AP5Z1O43299 807 aa18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 GFPT2O94808 682 aa18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 FGF19O95750 216 aa18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 CYP11B1P15538 503 aa18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 MAP3K7CLP57077 242 aa18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 TAF12Q16514 161 aa18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 PABPC1LQ4VXU2 614 aaKnown RBP18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 PKDCCQ504Y2 493 aa18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 SDHAF4Q5VUM1 108 aa18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 PTCRAQ6ISU1 281 aaPredicted RBP18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 DENND5BQ6ZUT9 1274 aa18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 GRASPQ7Z6J2 395 aaPredicted RBP18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 DNAJB7Q7Z6W7 309 aaPredicted RBP18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 TTC30AQ86WT1 665 aa18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 FEZF2Q8TBJ5 459 aa18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 EPS8L1Q8TE68 723 aa18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 GIPC2Q8TF65 315 aa18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 ATXN2LQ8WWM7 1075 aaKnown RBP18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 MYRFLQ96LU7 910 aa18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 CORO1BQ9BR76 489 aa18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 UBXN6Q9BZV1 441 aa18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 WDR6Q9NNW5 1121 aaKnown RBP18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 ACP6Q9NPH0 428 aa18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 HCFC1R1Q9NWW0 138 aa18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 DNMT3BQ9UBC3 853 aaKnown RBP18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 CLUHO75153 1309 aa18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 UNC80Q8N2C7 3258 aa18.64■□□□□ 0.57
ECHDC2-220ENST00000498544 SLC38A8A6NNN8 435 aa18.63■□□□□ 0.57
ECHDC2-220ENST00000498544 XPO1O14980 1071 aaKnown RBP18.63■□□□□ 0.57
ECHDC2-220ENST00000498544 BEST1O76090 585 aa18.63■□□□□ 0.57
ECHDC2-220ENST00000498544 MICAL2O94851 1124 aa18.63■□□□□ 0.57
ECHDC2-220ENST00000498544 RTN3O95197 1032 aaPredicted RBP18.63■□□□□ 0.57
ECHDC2-220ENST00000498544 CALCAP01258 141 aa18.63■□□□□ 0.57
ECHDC2-220ENST00000498544 RHOP08100 348 aa18.63■□□□□ 0.57
ECHDC2-220ENST00000498544 CCDC172P0C7W6 258 aa18.63■□□□□ 0.57
ECHDC2-220ENST00000498544 HMGA1P17096 107 aaKnown RBP18.63■□□□□ 0.57
ECHDC2-220ENST00000498544 SMAD2Q15796 467 aaKnown RBP18.63■□□□□ 0.57
ECHDC2-220ENST00000498544 TMC8Q8IU68 726 aa18.63■□□□□ 0.57
ECHDC2-220ENST00000498544 NUP93Q8N1F7 819 aa18.63■□□□□ 0.57
ECHDC2-220ENST00000498544 ZNF397Q8NF99 534 aaPredicted RBP18.63■□□□□ 0.57
ECHDC2-220ENST00000498544 MRFAP1L1Q96HT8 127 aa18.63■□□□□ 0.57
ECHDC2-220ENST00000498544 TTLL2Q9BWV7 592 aa18.63■□□□□ 0.57
ECHDC2-220ENST00000498544 LRRC3Q9BY71 257 aa18.63■□□□□ 0.57
ECHDC2-220ENST00000498544 NUCKS1Q9H1E3 243 aaKnown RBP18.63■□□□□ 0.57
ECHDC2-220ENST00000498544 UXTQ9UBK9 157 aaPredicted RBP18.63■□□□□ 0.57
ECHDC2-220ENST00000498544 CDH22Q9UJ99 828 aa18.63■□□□□ 0.57
ECHDC2-220ENST00000498544 PCDHGC3Q9UN70 934 aa18.63■□□□□ 0.57
ECHDC2-220ENST00000498544 TCF20Q9UGU0 1960 aaKnown RBP18.62■□□□□ 0.57
ECHDC2-220ENST00000498544 LRRC53A6NM62 1247 aa18.62■□□□□ 0.57
ECHDC2-220ENST00000498544 TNFRSF10BO14763 440 aa18.62■□□□□ 0.57
ECHDC2-220ENST00000498544 GYPCP04921 128 aa18.62■□□□□ 0.57
ECHDC2-220ENST00000498544 FERP16591 822 aa18.62■□□□□ 0.57
ECHDC2-220ENST00000498544 PLA2G4AP47712 749 aa18.62■□□□□ 0.57
ECHDC2-220ENST00000498544 ZNF75DP51815 510 aa18.62■□□□□ 0.57
ECHDC2-220ENST00000498544 SLC5A3P53794 718 aa18.62■□□□□ 0.57
ECHDC2-220ENST00000498544 MRPS5P82675 430 aaKnown RBP18.62■□□□□ 0.57
ECHDC2-220ENST00000498544 PDE4CQ08493 712 aa18.62■□□□□ 0.57
ECHDC2-220ENST00000498544 CYP4A22Q5TCH4 519 aa18.62■□□□□ 0.57
ECHDC2-220ENST00000498544 PDZD4Q76G19 769 aaPredicted RBP18.62■□□□□ 0.57
ECHDC2-220ENST00000498544 ZNF677Q86XU0 584 aa18.62■□□□□ 0.57
ECHDC2-220ENST00000498544 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.62■□□□□ 0.57
ECHDC2-220ENST00000498544 POMKQ9H5K3 350 aa18.62■□□□□ 0.57
ECHDC2-220ENST00000498544 COMMD8Q9NX08 183 aa18.62■□□□□ 0.57
ECHDC2-220ENST00000498544 CAPN11Q9UMQ6 739 aa18.62■□□□□ 0.57
ECHDC2-220ENST00000498544 HHLA1C9JL84 531 aa18.61■□□□□ 0.57
ECHDC2-220ENST00000498544 ZNF197O14709 1029 aa18.61■□□□□ 0.57
ECHDC2-220ENST00000498544 FSHRP23945 695 aa18.61■□□□□ 0.57
ECHDC2-220ENST00000498544 KRT9P35527 623 aa18.61■□□□□ 0.57
ECHDC2-220ENST00000498544 ZBED6P86452 979 aa18.61■□□□□ 0.57
ECHDC2-220ENST00000498544 MTMR3Q13615 1198 aa18.61■□□□□ 0.57
ECHDC2-220ENST00000498544 NOP9Q86U38 636 aaKnown RBP18.61■□□□□ 0.57
ECHDC2-220ENST00000498544 PIGZQ86VD9 579 aa18.61■□□□□ 0.57
ECHDC2-220ENST00000498544 STKLD1Q8NE28 680 aa18.61■□□□□ 0.57
ECHDC2-220ENST00000498544 UBA3Q8TBC4 463 aa18.61■□□□□ 0.57
ECHDC2-220ENST00000498544 DDX1Q92499 740 aaKnown RBP18.61■□□□□ 0.57
ECHDC2-220ENST00000498544 SECISBP2LQ93073 1101 aaKnown RBP18.61■□□□□ 0.57
ECHDC2-220ENST00000498544 GCNAQ96QF7 691 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms