RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	FRMPD3	Q5JV73	1810 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	CHD8	Q9HCK8	2581 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	LCT	P09848	1927 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	IGKV6D-21	A0A0A0MT36	114 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325		A0A1W2PQC6	194 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	GSTTP1	A0A1W2PQM5	241 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	LGALS16	A8MUM7	142 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	NUDT19	A8MXV4	375 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	KBTBD13	C9JR72	458 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	AKR1B15	C9JRZ8	316 aa	Predicted RBP	5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	NKRF	O15226	690 aa	Known RBP eCLIP	5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	TEX33	O43247	280 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	ZNF500	O60304	480 aa	Predicted RBP	5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	USO1	O60763	962 aa	Known RBP	5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	PQBP1	O60828	265 aa	Known RBP	5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	TIMP1	P01033	207 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	GH1	P01241	217 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	MYB	P10242	640 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	TXN	P10599	105 aa	Known RBP	5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	PLS3	P13797	630 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	EIF4B	P23588	611 aa	Known RBP	5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	NR2F2	P24468	414 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	NMT1	P30419	496 aa	Known RBP	5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	CYP2C19	P33261	490 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	TCF7	P36402	384 aa	Predicted RBP	5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	RGS2	P41220	211 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	LIMS1	P48059	325 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	SLC26A2	P50443	739 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	NPEPPS	P55786	919 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	TBX2	Q13207	712 aa	Predicted RBP	5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	LAPTM5	Q13571	262 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	MYBPC2	Q14324	1141 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	GRB14	Q14449	540 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	KIR3DS1	Q14943	382 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	NFIL3	Q16649	462 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	UGCG	Q16739	394 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	LY6K	Q17RY6	165 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	VWA3B	Q502W6	1294 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	ZCWPW2	Q504Y3	356 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	FAM102B	Q5T8I3	360 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	UTP14C	Q5TAP6	766 aa	Known RBP	5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	IQSEC1	Q6DN90	963 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	CCDC62	Q6P9F0	684 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	MAMDC4	Q6UXC1	1216 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	ZPBP2	Q6X784	338 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	ANO5	Q75V66	913 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	SND1	Q7KZF4	910 aa	Known RBP eCLIP	5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	ARMCX2	Q7L311	632 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	MAEA	Q7L5Y9	396 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	EEPD1	Q7L9B9	569 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	PLPPR4	Q7Z2D5	763 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	APTX	Q7Z2E3	356 aa	Known RBP	5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	TRMT1L	Q7Z2T5	733 aa	Known RBP	5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	CNGA4	Q8IV77	575 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	CCDC60	Q8IWA6	550 aa	Predicted RBP	5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	SYCP3	Q8IZU3	236 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	ZNF655	Q8N720	491 aa	Predicted RBP	5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	ARRDC4	Q8NCT1	418 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	AFAP1L1	Q8TED9	768 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	CACTIN	Q8WUQ7	758 aa	Known RBP	5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	GLG1	Q92896	1179 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	HVCN1	Q96D96	273 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	CCDC51	Q96ER9	411 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	FGD4	Q96M96	766 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	ZNF830	Q96NB3	372 aa	Predicted RBP	5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	ACCS	Q96QU6	501 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	APBA2	Q99767	749 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	JPH2	Q9BR39	696 aa	Predicted RBP	5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	GBP3	Q9H0R5	595 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	ABHD16B	Q9H3Z7	469 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	ST6GALNAC4	Q9H4F1	302 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	SMARCAD1	Q9H4L7	1026 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	ATP6V0A4	Q9HBG4	840 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	METTL14	Q9HCE5	456 aa	Known RBP	5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	KMT5A	Q9NQR1	393 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	CYP26B1	Q9NR63	512 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	TNFRSF10D	Q9UBN6	386 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	KLHL3	Q9UH77	587 aa		5.76	□□□□□ -1.49
HMGXB4-208	ENST00000498325	IGSF9B	Q9UPX0	1349 aa		5.75	□□□□□ -1.49
HMGXB4-208	ENST00000498325	CCDC169	A6NNP5	214 aa		5.75	□□□□□ -1.49
HMGXB4-208	ENST00000498325	CHURC1-FNTB	B4DL54	471 aa		5.75	□□□□□ -1.49
HMGXB4-208	ENST00000498325		K7ENM7	598 aa		5.75	□□□□□ -1.49
HMGXB4-208	ENST00000498325	MATN3	O15232	486 aa		5.75	□□□□□ -1.49
HMGXB4-208	ENST00000498325	SLC16A3	O15427	465 aa	Known RBP	5.75	□□□□□ -1.49
HMGXB4-208	ENST00000498325	CCP110	O43303	1012 aa		5.75	□□□□□ -1.49
HMGXB4-208	ENST00000498325	STX10	O60499	249 aa		5.75	□□□□□ -1.49
HMGXB4-208	ENST00000498325	SORBS3	O60504	671 aa		5.75	□□□□□ -1.49
HMGXB4-208	ENST00000498325	MSC	O60682	206 aa		5.75	□□□□□ -1.49
HMGXB4-208	ENST00000498325	STBD1	O95210	358 aa		5.75	□□□□□ -1.49
HMGXB4-208	ENST00000498325	NR3C1	P04150	777 aa		5.75	□□□□□ -1.49
HMGXB4-208	ENST00000498325	SYP	P08247	313 aa		5.75	□□□□□ -1.49
HMGXB4-208	ENST00000498325	EPB41	P11171	864 aa	Known RBP	5.75	□□□□□ -1.49
HMGXB4-208	ENST00000498325	SKIL	P12757	684 aa		5.75	□□□□□ -1.49
HMGXB4-208	ENST00000498325	PSMC2	P35998	433 aa	Known RBP	5.75	□□□□□ -1.49
HMGXB4-208	ENST00000498325	PBX1	P40424	430 aa		5.75	□□□□□ -1.49
HMGXB4-208	ENST00000498325	POLG	P54098	1239 aa	Predicted RBP	5.75	□□□□□ -1.49
HMGXB4-208	ENST00000498325	PEX3	P56589	373 aa		5.75	□□□□□ -1.49
HMGXB4-208	ENST00000498325	GTF2B	Q00403	316 aa		5.75	□□□□□ -1.49
HMGXB4-208	ENST00000498325	PRKCE	Q02156	737 aa		5.75	□□□□□ -1.49
HMGXB4-208	ENST00000498325	KRTAP1-1	Q07627	177 aa		5.75	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms