RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 BEST1O76090 585 aa14.34□□□□□ -0.11
CPNE1-227ENST00000498056 GLP2RO95838 553 aa14.34□□□□□ -0.11
CPNE1-227ENST00000498056 CHRNB2P17787 502 aa14.34□□□□□ -0.11
CPNE1-227ENST00000498056 TNFAIP3P21580 790 aa14.34□□□□□ -0.11
CPNE1-227ENST00000498056 ALDH1A3P47895 512 aa14.34□□□□□ -0.11
CPNE1-227ENST00000498056 RGS7P49802 495 aa14.34□□□□□ -0.11
CPNE1-227ENST00000498056 RPL10AP62906 217 aaKnown RBP14.34□□□□□ -0.11
CPNE1-227ENST00000498056 PLD1Q13393 1074 aa14.34□□□□□ -0.11
CPNE1-227ENST00000498056 MEA1Q16626 185 aa14.34□□□□□ -0.11
CPNE1-227ENST00000498056 WDR59Q6PJI9 974 aa14.34□□□□□ -0.11
CPNE1-227ENST00000498056 TCEAL8Q8IYN2 117 aa14.34□□□□□ -0.11
CPNE1-227ENST00000498056 ZMIZ2Q8NF64 920 aa14.34□□□□□ -0.11
CPNE1-227ENST00000498056 VN1R2Q8NFZ6 395 aa14.34□□□□□ -0.11
CPNE1-227ENST00000498056 CASP10Q92851 521 aa14.34□□□□□ -0.11
CPNE1-227ENST00000498056 PDLIM2Q96JY6 352 aa14.34□□□□□ -0.11
CPNE1-227ENST00000498056 KCNK16Q96T55 309 aa14.34□□□□□ -0.11
CPNE1-227ENST00000498056 DUSP16Q9BY84 665 aa14.34□□□□□ -0.11
CPNE1-227ENST00000498056 ST7Q9NRC1 585 aa14.34□□□□□ -0.11
CPNE1-227ENST00000498056 DPP7Q9UHL4 492 aa14.34□□□□□ -0.11
CPNE1-227ENST00000498056 BZW2Q9Y6E2 419 aaKnown RBP14.34□□□□□ -0.11
CPNE1-227ENST00000498056 SZT2Q5T011 3432 aa14.34□□□□□ -0.11
CPNE1-227ENST00000498056 TMCO5BA8MYB1 307 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 XPO1O14980 1071 aaKnown RBP14.33□□□□□ -0.12
CPNE1-227ENST00000498056 CCL16O15467 120 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 RFPL2O75678 378 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 LSM8O95777 96 aaKnown RBP14.33□□□□□ -0.12
CPNE1-227ENST00000498056 EIF4A3P38919 411 aaKnown RBP14.33□□□□□ -0.12
CPNE1-227ENST00000498056 TUFMP49411 452 aaKnown RBP14.33□□□□□ -0.12
CPNE1-227ENST00000498056 KIF11P52732 1056 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 SLC5A3P53794 718 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 EPHB3P54753 998 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 NOMO3P69849 1222 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 PDCLQ13371 301 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 LILRA6Q6PI73 481 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 CYP26C1Q6V0L0 522 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 TRIM72Q6ZMU5 477 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 GPRIN1Q7Z2K8 1008 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 PIGZQ86VD9 579 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 EFHBQ8N7U6 833 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 TMEM35BQ8NCS4 154 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 OLIG1Q8TAK6 271 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 IPO4Q8TEX9 1081 aaKnown RBP14.33□□□□□ -0.12
CPNE1-227ENST00000498056 GIPC2Q8TF65 315 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 NOX5Q96PH1 765 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 CHP1Q99653 195 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 PLEKHA4Q9H4M7 779 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 SYNCQ9H7C4 482 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 SFXN1Q9H9B4 322 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 DZANK1Q9NVP4 752 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 CLDND1Q9NY35 253 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 HSFX1Q9UBD0 423 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 MAFFQ9ULX9 164 aa14.33□□□□□ -0.12
CPNE1-227ENST00000498056 SOWAHDA6NJG2 315 aa14.32□□□□□ -0.12
CPNE1-227ENST00000498056 PIK3R2O00459 728 aa14.32□□□□□ -0.12
CPNE1-227ENST00000498056 AKR1B10O60218 316 aa14.32□□□□□ -0.12
CPNE1-227ENST00000498056 ZMYND10O75800 440 aa14.32□□□□□ -0.12
CPNE1-227ENST00000498056 NSFP46459 744 aaKnown RBP14.32□□□□□ -0.12
CPNE1-227ENST00000498056 PLA2G4AP47712 749 aa14.32□□□□□ -0.12
CPNE1-227ENST00000498056 ADIGQ0VDE8 80 aa14.32□□□□□ -0.12
CPNE1-227ENST00000498056 CCDC85BQ15834 202 aaPredicted RBP14.32□□□□□ -0.12
CPNE1-227ENST00000498056 TAF12Q16514 161 aa14.32□□□□□ -0.12
CPNE1-227ENST00000498056 CLEC16AQ2KHT3 1053 aa14.32□□□□□ -0.12
CPNE1-227ENST00000498056 PKDCCQ504Y2 493 aa14.32□□□□□ -0.12
CPNE1-227ENST00000498056 SIX6OS1Q8N1H7 587 aa14.32□□□□□ -0.12
CPNE1-227ENST00000498056 ELMOD1Q8N336 334 aa14.32□□□□□ -0.12
CPNE1-227ENST00000498056 MSANTD4Q8NCY6 345 aa14.32□□□□□ -0.12
CPNE1-227ENST00000498056 CPA5Q8WXQ8 436 aa14.32□□□□□ -0.12
CPNE1-227ENST00000498056 C8orf48Q96LL4 319 aa14.32□□□□□ -0.12
CPNE1-227ENST00000498056 CCDC42Q96M95 316 aa14.32□□□□□ -0.12
CPNE1-227ENST00000498056 PCDHB18PQ96TA0 734 aa14.32□□□□□ -0.12
CPNE1-227ENST00000498056 BAG1Q99933 345 aaPredicted RBP14.32□□□□□ -0.12
CPNE1-227ENST00000498056 C11orf70Q9BRQ4 267 aa14.32□□□□□ -0.12
CPNE1-227ENST00000498056 SYT11Q9BT88 431 aa14.32□□□□□ -0.12
CPNE1-227ENST00000498056 APOL5Q9BWW9 433 aa14.32□□□□□ -0.12
CPNE1-227ENST00000498056 LRRC4Q9HBW1 653 aa14.32□□□□□ -0.12
CPNE1-227ENST00000498056 CSNK1G1Q9HCP0 422 aa14.32□□□□□ -0.12
CPNE1-227ENST00000498056 CYTH4Q9UIA0 394 aa14.32□□□□□ -0.12
CPNE1-227ENST00000498056 MAGED2Q9UNF1 606 aaPredicted RBP14.32□□□□□ -0.12
CPNE1-227ENST00000498056 DOCK8Q8NF50 2099 aa14.31□□□□□ -0.12
CPNE1-227ENST00000498056 SSU72P8A0A1W2PR75 194 aa14.31□□□□□ -0.12
CPNE1-227ENST00000498056 DDX3XO00571 662 aaKnown RBP eCLIP14.31□□□□□ -0.12
CPNE1-227ENST00000498056 NRDCO43847 1150 aa14.31□□□□□ -0.12
CPNE1-227ENST00000498056 TBX10O75333 385 aa14.31□□□□□ -0.12
CPNE1-227ENST00000498056 CYP1A1P04798 512 aaPredicted RBP14.31□□□□□ -0.12
CPNE1-227ENST00000498056 LCP1P13796 627 aa14.31□□□□□ -0.12
CPNE1-227ENST00000498056 POU3F3P20264 500 aaPredicted RBP14.31□□□□□ -0.12
CPNE1-227ENST00000498056 GPD2P43304 727 aa14.31□□□□□ -0.12
CPNE1-227ENST00000498056 CENPCQ03188 943 aa14.31□□□□□ -0.12
CPNE1-227ENST00000498056 GFPT1Q06210 699 aaPredicted RBP14.31□□□□□ -0.12
CPNE1-227ENST00000498056 MAPK8IP2Q13387 824 aaPredicted RBP14.31□□□□□ -0.12
CPNE1-227ENST00000498056 MTMR3Q13615 1198 aa14.31□□□□□ -0.12
CPNE1-227ENST00000498056 SKIV2LQ15477 1246 aaKnown RBP14.31□□□□□ -0.12
CPNE1-227ENST00000498056 PTPN20Q4JDL3 420 aa14.31□□□□□ -0.12
CPNE1-227ENST00000498056 RARS2Q5T160 578 aaKnown RBP14.31□□□□□ -0.12
CPNE1-227ENST00000498056 PMF1Q6P1K2 205 aa14.31□□□□□ -0.12
CPNE1-227ENST00000498056 DENND5BQ6ZUT9 1274 aa14.31□□□□□ -0.12
CPNE1-227ENST00000498056 SLC30A5Q8TAD4 765 aa14.31□□□□□ -0.12
CPNE1-227ENST00000498056 PPM1EQ8WY54 764 aa14.31□□□□□ -0.12
CPNE1-227ENST00000498056 CPXM1Q96SM3 734 aa14.31□□□□□ -0.12
CPNE1-227ENST00000498056 LHX5Q9H2C1 402 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms