RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 FAM200BP0CF97 657 aa17.79■□□□□ 0.44
LMNA-216ENST00000496738 NPR3P17342 541 aa17.79■□□□□ 0.44
LMNA-216ENST00000496738 RFC1P35251 1148 aaPredicted RBP17.79■□□□□ 0.44
LMNA-216ENST00000496738 ALDH7A1P49419 539 aaKnown RBP17.79■□□□□ 0.44
LMNA-216ENST00000496738 ZNF252P-AS1Q0IIN9 211 aa17.79■□□□□ 0.44
LMNA-216ENST00000496738 BTG3Q14201 252 aaPredicted RBP17.79■□□□□ 0.44
LMNA-216ENST00000496738 TAF5Q15542 800 aa17.79■□□□□ 0.44
LMNA-216ENST00000496738 PIGZQ86VD9 579 aa17.79■□□□□ 0.44
LMNA-216ENST00000496738 MNS1Q8NEH6 495 aa17.79■□□□□ 0.44
LMNA-216ENST00000496738 HES6Q96HZ4 224 aa17.79■□□□□ 0.44
LMNA-216ENST00000496738 FGBP02675 491 aa17.78■□□□□ 0.44
LMNA-216ENST00000496738 TSPY1Q01534 308 aa17.78■□□□□ 0.44
LMNA-216ENST00000496738 PLCB3Q01970 1234 aa17.78■□□□□ 0.44
LMNA-216ENST00000496738 PPIGQ13427 754 aaKnown RBP eCLIP17.78■□□□□ 0.441e-8■■■□□ 15.5
LMNA-216ENST00000496738 ZNF268Q14587 947 aaPredicted RBP17.78■□□□□ 0.44
LMNA-216ENST00000496738 ANKRD7Q92527 254 aa17.78■□□□□ 0.44
LMNA-216ENST00000496738 ZNF689Q96CS4 500 aaPredicted RBP17.78■□□□□ 0.44
LMNA-216ENST00000496738 MCRS1Q96EZ8 462 aa17.78■□□□□ 0.44
LMNA-216ENST00000496738 PKMYT1Q99640 499 aa17.78■□□□□ 0.44
LMNA-216ENST00000496738 SMOQ99835 787 aa17.78■□□□□ 0.44
LMNA-216ENST00000496738 FEZ2Q9UHY8 353 aaPredicted RBP17.78■□□□□ 0.44
LMNA-216ENST00000496738 VWA8A3KMH1 1905 aa17.78■□□□□ 0.44
LMNA-216ENST00000496738 DDX3YO15523 660 aaKnown RBP17.78■□□□□ 0.44
LMNA-216ENST00000496738 PAPSS1O43252 624 aaPredicted RBP17.78■□□□□ 0.44
LMNA-216ENST00000496738 BAIAP3O94812 1187 aa17.78■□□□□ 0.44
LMNA-216ENST00000496738 TCP1P17987 556 aaKnown RBP17.78■□□□□ 0.44
LMNA-216ENST00000496738 BDNFP23560 247 aa17.78■□□□□ 0.44
LMNA-216ENST00000496738 SSR1P43307 286 aaKnown RBP17.78■□□□□ 0.44
LMNA-216ENST00000496738 ARPP19P56211 112 aa17.78■□□□□ 0.44
LMNA-216ENST00000496738 SLC8A3P57103 927 aa17.78■□□□□ 0.44
LMNA-216ENST00000496738 CTXN3Q4LDR2 81 aa17.78■□□□□ 0.44
LMNA-216ENST00000496738 SLC39A12Q504Y0 691 aa17.78■□□□□ 0.44
LMNA-216ENST00000496738 RTP2Q5QGT7 225 aa17.78■□□□□ 0.44
LMNA-216ENST00000496738 FAM171BQ6P995 826 aa17.78■□□□□ 0.44
LMNA-216ENST00000496738 SPATA18Q8TC71 538 aa17.78■□□□□ 0.44
LMNA-216ENST00000496738 NDRG1Q92597 394 aaKnown RBP17.78■□□□□ 0.44
LMNA-216ENST00000496738 ALG3Q92685 438 aa17.78■□□□□ 0.44
LMNA-216ENST00000496738 CALR3Q96L12 384 aaKnown RBP17.78■□□□□ 0.44
LMNA-216ENST00000496738 YME1L1Q96TA2 773 aa17.78■□□□□ 0.44
LMNA-216ENST00000496738 CXXC1Q9P0U4 656 aaPredicted RBP17.78■□□□□ 0.44
LMNA-216ENST00000496738 WDR35Q9P2L0 1181 aa17.78■□□□□ 0.44
LMNA-216ENST00000496738 MRPL42Q9Y6G3 142 aaKnown RBP17.78■□□□□ 0.44
LMNA-216ENST00000496738 PTPRSQ13332 1948 aa17.77■□□□□ 0.44
LMNA-216ENST00000496738 SIGLEC16A6NMB1 481 aa17.77■□□□□ 0.44
LMNA-216ENST00000496738 PDE2AO00408 941 aaPredicted RBP17.77■□□□□ 0.44
LMNA-216ENST00000496738 XPO1O14980 1071 aaKnown RBP17.77■□□□□ 0.44
LMNA-216ENST00000496738 PROSCO94903 275 aa17.77■□□□□ 0.44
LMNA-216ENST00000496738 GJC1P36383 396 aa17.77■□□□□ 0.44
LMNA-216ENST00000496738 PLA2G4AP47712 749 aa17.77■□□□□ 0.44
LMNA-216ENST00000496738 TMEM110Q86TL2 294 aa17.77■□□□□ 0.44
LMNA-216ENST00000496738 CREG2Q8IUH2 290 aa17.77■□□□□ 0.44
LMNA-216ENST00000496738 RC3H2Q9HBD1 1191 aaKnown RBP17.77■□□□□ 0.44
LMNA-216ENST00000496738 SYN3O14994 580 aa17.77■□□□□ 0.43
LMNA-216ENST00000496738 EFCAB14O75071 495 aa17.77■□□□□ 0.43
LMNA-216ENST00000496738 OAZ2O95190 189 aa17.77■□□□□ 0.43
LMNA-216ENST00000496738 ADIGQ0VDE8 80 aa17.77■□□□□ 0.43
LMNA-216ENST00000496738 ZNF211Q13398 564 aaPredicted RBP17.77■□□□□ 0.43
LMNA-216ENST00000496738 WHAMMP3Q1A5X7 153 aa17.77■□□□□ 0.43
LMNA-216ENST00000496738 OLFML1Q6UWY5 402 aa17.77■□□□□ 0.43
LMNA-216ENST00000496738 EGFL6Q8IUX8 553 aa17.77■□□□□ 0.43
LMNA-216ENST00000496738 ZMIZ2Q8NF64 920 aa17.77■□□□□ 0.43
LMNA-216ENST00000496738 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.77■□□□□ 0.435e-7■■□□□ 13.2
LMNA-216ENST00000496738 F8VP50 259 aa17.76■□□□□ 0.43
LMNA-216ENST00000496738 PRLRP16471 622 aa17.76■□□□□ 0.43
LMNA-216ENST00000496738 FGFR3P22607 806 aa17.76■□□□□ 0.43
LMNA-216ENST00000496738 GSCP56915 257 aaPredicted RBP17.76■□□□□ 0.43
LMNA-216ENST00000496738 NAA30Q147X3 362 aaPredicted RBP17.76■□□□□ 0.43
LMNA-216ENST00000496738 DCAF12L1Q5VU92 463 aa17.76■□□□□ 0.43
LMNA-216ENST00000496738 PRSS55Q6UWB4 352 aaPredicted RBP17.76■□□□□ 0.43
LMNA-216ENST00000496738 GPRIN1Q7Z2K8 1008 aa17.76■□□□□ 0.43
LMNA-216ENST00000496738 STK32AQ8WU08 396 aa17.76■□□□□ 0.43
LMNA-216ENST00000496738 SMARCD1Q96GM5 515 aa17.76■□□□□ 0.43
LMNA-216ENST00000496738 PGLYRP2Q96PD5 576 aa17.76■□□□□ 0.43
LMNA-216ENST00000496738 IP6K2Q9UHH9 426 aa17.76■□□□□ 0.43
LMNA-216ENST00000496738 CTIFO43310 598 aaKnown RBP17.76■□□□□ 0.43
LMNA-216ENST00000496738 CEP104O60308 925 aa17.76■□□□□ 0.43
LMNA-216ENST00000496738 TCF4P15884 667 aa17.76■□□□□ 0.43
LMNA-216ENST00000496738 PSMA2P25787 234 aa17.76■□□□□ 0.43
LMNA-216ENST00000496738 NDUFV1P49821 464 aa17.76■□□□□ 0.43
LMNA-216ENST00000496738 TRNP1Q6NT89 227 aa17.76■□□□□ 0.43
LMNA-216ENST00000496738 AADACL2Q6P093 401 aa17.76■□□□□ 0.43
LMNA-216ENST00000496738 KCNT2Q6UVM3 1135 aa17.76■□□□□ 0.43
LMNA-216ENST00000496738 CD101Q93033 1021 aa17.76■□□□□ 0.43
LMNA-216ENST00000496738 VN1R3Q9BXE9 311 aa17.76■□□□□ 0.43
LMNA-216ENST00000496738 ABI2Q9NYB9 513 aaPredicted RBP17.76■□□□□ 0.43
LMNA-216ENST00000496738 TAS2R40P59535 323 aa17.75■□□□□ 0.43
LMNA-216ENST00000496738 SLC6A3Q01959 620 aa17.75■□□□□ 0.43
LMNA-216ENST00000496738 TAP1Q03518 808 aa17.75■□□□□ 0.43
LMNA-216ENST00000496738 TUBB2AQ13885 445 aa17.75■□□□□ 0.43
LMNA-216ENST00000496738 TERF2Q15554 542 aa17.75■□□□□ 0.43
LMNA-216ENST00000496738 CCDC181Q5TID7 509 aa17.75■□□□□ 0.43
LMNA-216ENST00000496738 SPATA2LQ8IUW3 424 aaPredicted RBP17.75■□□□□ 0.43
LMNA-216ENST00000496738 IGSF21Q96ID5 467 aa17.75■□□□□ 0.43
LMNA-216ENST00000496738 TUBB2BQ9BVA1 445 aa17.75■□□□□ 0.43
LMNA-216ENST00000496738 ZCWPW1Q9H0M4 648 aa17.75■□□□□ 0.43
LMNA-216ENST00000496738 C2CD2LO14523 706 aa17.74■□□□□ 0.43
LMNA-216ENST00000496738 CYP2F1P24903 491 aa17.74■□□□□ 0.43
LMNA-216ENST00000496738 FLT3P36888 993 aa17.74■□□□□ 0.43
LMNA-216ENST00000496738 TMEM240Q5SV17 173 aa17.74■□□□□ 0.43
LMNA-216ENST00000496738 ZNF280DQ6N043 979 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms