RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 USP13Q92995 863 aaPredicted RBP17.12■□□□□ 0.33
DNMT3A-215ENST00000496570 SMARCD1Q96GM5 515 aa17.12■□□□□ 0.33
DNMT3A-215ENST00000496570 GCNAQ96QF7 691 aa17.12■□□□□ 0.33
DNMT3A-215ENST00000496570 HNRNPABQ99729 332 aaKnown RBP17.12■□□□□ 0.33
DNMT3A-215ENST00000496570 DDX23Q9BUQ8 820 aaKnown RBP17.12■□□□□ 0.33
DNMT3A-215ENST00000496570 TRMT61BQ9BVS5 477 aaKnown RBP17.12■□□□□ 0.33
DNMT3A-215ENST00000496570 ARHGEF3Q9NR81 526 aa17.12■□□□□ 0.33
DNMT3A-215ENST00000496570 KRT82Q9NSB4 513 aa17.12■□□□□ 0.33
DNMT3A-215ENST00000496570 OBP2AQ9NY56 170 aa17.12■□□□□ 0.33
DNMT3A-215ENST00000496570 GCNT4Q9P109 453 aa17.12■□□□□ 0.33
DNMT3A-215ENST00000496570 CCL26Q9Y258 94 aa17.12■□□□□ 0.33
DNMT3A-215ENST00000496570 C2orf78A6NCI8 922 aa17.11■□□□□ 0.33
DNMT3A-215ENST00000496570 SOBPA7XYQ1 873 aa17.11■□□□□ 0.33
DNMT3A-215ENST00000496570 HHLA1C9JL84 531 aa17.11■□□□□ 0.33
DNMT3A-215ENST00000496570 P4HA2O15460 535 aa17.11■□□□□ 0.33
DNMT3A-215ENST00000496570 AP1G2O75843 785 aa17.11■□□□□ 0.33
DNMT3A-215ENST00000496570 STARD6P59095 220 aa17.11■□□□□ 0.33
DNMT3A-215ENST00000496570 LRMPQ12912 555 aa17.11■□□□□ 0.33
DNMT3A-215ENST00000496570 CUL2Q13617 745 aa17.11■□□□□ 0.33
DNMT3A-215ENST00000496570 SLC44A4Q53GD3 710 aa17.11■□□□□ 0.33
DNMT3A-215ENST00000496570 ZNF394Q53GI3 561 aa17.11■□□□□ 0.33
DNMT3A-215ENST00000496570 ASTLQ6HA08 431 aaPredicted RBP17.11■□□□□ 0.33
DNMT3A-215ENST00000496570 SCAMP5Q8TAC9 235 aa17.11■□□□□ 0.33
DNMT3A-215ENST00000496570 MRPS31Q92665 395 aaKnown RBP17.11■□□□□ 0.33
DNMT3A-215ENST00000496570 E2F7Q96AV8 911 aa17.11■□□□□ 0.33
DNMT3A-215ENST00000496570 CNOT6LQ96LI5 555 aaKnown RBP17.11■□□□□ 0.33
DNMT3A-215ENST00000496570 MED10Q9BTT4 135 aa17.11■□□□□ 0.33
DNMT3A-215ENST00000496570 FAM124BQ9H5Z6 455 aaPredicted RBP17.11■□□□□ 0.33
DNMT3A-215ENST00000496570 TBC1D17Q9HA65 648 aa17.11■□□□□ 0.33
DNMT3A-215ENST00000496570 DMAP1Q9NPF5 467 aaPredicted RBP17.11■□□□□ 0.33
DNMT3A-215ENST00000496570 ZMYM5Q9UJ78 669 aa17.11■□□□□ 0.33
DNMT3A-215ENST00000496570 TICRRQ7Z2Z1 1910 aa17.11■□□□□ 0.33
DNMT3A-215ENST00000496570 MUC6Q6W4X9 2439 aa17.1■□□□□ 0.33
DNMT3A-215ENST00000496570 FAM92AA1XBS5 289 aa17.1■□□□□ 0.33
DNMT3A-215ENST00000496570 ZNF840PA6NDX5 716 aa17.1■□□□□ 0.33
DNMT3A-215ENST00000496570 ACO1P21399 889 aaKnown RBP17.1■□□□□ 0.33
DNMT3A-215ENST00000496570 ADORA2BP29275 332 aa17.1■□□□□ 0.33
DNMT3A-215ENST00000496570 GDI1P31150 447 aa17.1■□□□□ 0.33
DNMT3A-215ENST00000496570 CLCN5P51795 746 aa17.1■□□□□ 0.33
DNMT3A-215ENST00000496570 PPP1R26Q5T8A7 1209 aaPredicted RBP17.1■□□□□ 0.33
DNMT3A-215ENST00000496570 PHLDB3Q6NSJ2 640 aa17.1■□□□□ 0.33
DNMT3A-215ENST00000496570 CLEC20AQ6ZU45 233 aa17.1■□□□□ 0.33
DNMT3A-215ENST00000496570 SUGP1Q8IWZ8 645 aaKnown RBP17.1■□□□□ 0.33
DNMT3A-215ENST00000496570 NUP93Q8N1F7 819 aa17.1■□□□□ 0.33
DNMT3A-215ENST00000496570 FLCNQ8NFG4 579 aa17.1■□□□□ 0.33
DNMT3A-215ENST00000496570 DNASE1L2Q92874 299 aa17.1■□□□□ 0.33
DNMT3A-215ENST00000496570 KAT5Q92993 513 aa17.1■□□□□ 0.33
DNMT3A-215ENST00000496570 CYFIP2Q96F07 1278 aa17.1■□□□□ 0.33
DNMT3A-215ENST00000496570 CYP2S1Q96SQ9 504 aa17.1■□□□□ 0.33
DNMT3A-215ENST00000496570 TRPV5Q9NQA5 729 aa17.1■□□□□ 0.33
DNMT3A-215ENST00000496570 ATP8B3O60423 1300 aa17.1■□□□□ 0.33
DNMT3A-215ENST00000496570 AFPP02771 609 aaKnown RBP17.09■□□□□ 0.33
DNMT3A-215ENST00000496570 CCDC192P0DO97 292 aa17.09■□□□□ 0.33
DNMT3A-215ENST00000496570 AOC1P19801 751 aa17.09■□□□□ 0.33
DNMT3A-215ENST00000496570 ERCC5P28715 1186 aaPredicted RBP17.09■□□□□ 0.33
DNMT3A-215ENST00000496570 PGFP49763 221 aa17.09■□□□□ 0.33
DNMT3A-215ENST00000496570 SLC5A3P53794 718 aa17.09■□□□□ 0.33
DNMT3A-215ENST00000496570 MAP3K7CLP57077 242 aa17.09■□□□□ 0.33
DNMT3A-215ENST00000496570 ZXDBP98169 803 aa17.09■□□□□ 0.33
DNMT3A-215ENST00000496570 PFKPQ01813 784 aa17.09■□□□□ 0.33
DNMT3A-215ENST00000496570 TAF10Q12962 218 aa17.09■□□□□ 0.33
DNMT3A-215ENST00000496570 ZNF268Q14587 947 aaPredicted RBP17.09■□□□□ 0.33
DNMT3A-215ENST00000496570 MLF2Q15773 248 aaPredicted RBP17.09■□□□□ 0.33
DNMT3A-215ENST00000496570 GPRIN1Q7Z2K8 1008 aa17.09■□□□□ 0.33
DNMT3A-215ENST00000496570 ARHGEF19Q8IW93 802 aa17.09■□□□□ 0.33
DNMT3A-215ENST00000496570 CELF5Q8N6W0 485 aaKnown RBP17.09■□□□□ 0.33
DNMT3A-215ENST00000496570 EHBP1Q8NDI1 1231 aa17.09■□□□□ 0.33
DNMT3A-215ENST00000496570 PRSS33Q8NF86 280 aa17.09■□□□□ 0.33
DNMT3A-215ENST00000496570 TMEM176AQ96HP8 235 aa17.09■□□□□ 0.33
DNMT3A-215ENST00000496570 MFSD1Q9H3U5 465 aa17.09■□□□□ 0.33
DNMT3A-215ENST00000496570 BRD9Q9H8M2 597 aa17.09■□□□□ 0.33
DNMT3A-215ENST00000496570 HEBP1Q9NRV9 189 aa17.09■□□□□ 0.33
DNMT3A-215ENST00000496570 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.09■□□□□ 0.33
DNMT3A-215ENST00000496570 HELZP42694 1942 aaKnown RBP17.08■□□□□ 0.33
DNMT3A-215ENST00000496570 CHADO15335 359 aa17.08■□□□□ 0.32
DNMT3A-215ENST00000496570 FGFR1OPO95684 399 aaKnown RBP17.08■□□□□ 0.32
DNMT3A-215ENST00000496570 OLFM2O95897 454 aa17.08■□□□□ 0.32
DNMT3A-215ENST00000496570 AVPR1AP37288 418 aa17.08■□□□□ 0.32
DNMT3A-215ENST00000496570 PRKCQQ04759 706 aa17.08■□□□□ 0.32
DNMT3A-215ENST00000496570 ZNF687Q8N1G0 1237 aa17.08■□□□□ 0.32
DNMT3A-215ENST00000496570 TTC39CQ8N584 583 aa17.08■□□□□ 0.32
DNMT3A-215ENST00000496570 ARL14EPQ8N8R7 260 aaPredicted RBP17.08■□□□□ 0.32
DNMT3A-215ENST00000496570 BPIFB1Q8TDL5 484 aa17.08■□□□□ 0.32
DNMT3A-215ENST00000496570 IRF7Q92985 503 aa17.08■□□□□ 0.32
DNMT3A-215ENST00000496570 ZFYVE19Q96K21 471 aa17.08■□□□□ 0.32
DNMT3A-215ENST00000496570 FOXQ1Q9C009 403 aa17.08■□□□□ 0.32
DNMT3A-215ENST00000496570 TDP1Q9NUW8 608 aa17.08■□□□□ 0.32
DNMT3A-215ENST00000496570 DLGAP2Q9P1A6 1054 aa17.08■□□□□ 0.32
DNMT3A-215ENST00000496570 HCN4Q9Y3Q4 1203 aa17.08■□□□□ 0.32
DNMT3A-215ENST00000496570 MTF2Q9Y483 593 aaPredicted RBP17.08■□□□□ 0.32
DNMT3A-215ENST00000496570 GOLGA6L22H0YM25 854 aa17.07■□□□□ 0.32
DNMT3A-215ENST00000496570 ZNF263O14978 683 aa17.07■□□□□ 0.32
DNMT3A-215ENST00000496570 RTN3O95197 1032 aaPredicted RBP17.07■□□□□ 0.32
DNMT3A-215ENST00000496570 OAS1P00973 400 aaKnown RBP17.07■□□□□ 0.32
DNMT3A-215ENST00000496570 ZDHHC11BP0C7U3 371 aa17.07■□□□□ 0.32
DNMT3A-215ENST00000496570 FAM200BP0CF97 657 aa17.07■□□□□ 0.32
DNMT3A-215ENST00000496570 CD72P21854 359 aa17.07■□□□□ 0.32
DNMT3A-215ENST00000496570 YWHAQP27348 245 aa17.07■□□□□ 0.32
DNMT3A-215ENST00000496570 IFRD2Q12894 506 aaPredicted RBP17.07■□□□□ 0.32
DNMT3A-215ENST00000496570 SNX30Q5VWJ9 437 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms