RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 NEK4P51957 841 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 NCKAP1LP55160 1127 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 NLRP12P59046 1061 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 SRSF11Q05519 484 aaKnown RBP7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 USP4Q13107 963 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 MTF1Q14872 753 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 PTPAQ15257 358 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 SPATA1Q5VX52 437 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 KRT79Q5XKE5 535 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 PMS2CLQ68D20 193 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 SLC39A4Q6P5W5 647 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 ZPBP2Q6X784 338 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 ARMCX6Q7L4S7 300 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 CYP2U1Q7Z449 544 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 TTC30AQ86WT1 665 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 CAMKK1Q8N5S9 505 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 NBEAQ8NFP9 2946 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 WHAMMQ8TF30 809 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 LRRC15Q8TF66 581 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 ZCCHC14Q8WYQ9 949 aaKnown RBP7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 GATA6Q92908 595 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 FAM84AQ96KN4 292 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 SLC22A12Q96S37 553 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 P2RY13Q9BPV8 354 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 PYM1Q9BRP8 204 aaKnown RBP7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 PI4K2AQ9BTU6 479 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 OXCT2Q9BYC2 517 aaPredicted RBP7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 IKZF4Q9H2S9 585 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 FOXP1Q9H334 677 aaPredicted RBP7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 RPF1Q9H9Y2 349 aaKnown RBP7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 PLEKHA5Q9HAU0 1116 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 TRPC7Q9HCX4 862 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 TMEM9BQ9NQ34 198 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 FSCN3Q9NQT6 498 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 TDP1Q9NUW8 608 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 NOL7Q9UMY1 257 aaKnown RBP7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 SHROOM3Q8TF72 1996 aa7.48□□□□□ -1.21
CHCHD3-206ENST00000496427 FASNP49327 2511 aaKnown RBP7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 ANKRD63C9JTQ0 380 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 PIRO00625 290 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 CYB561D2O14569 222 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 CDX4O14627 284 aaPredicted RBP7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 HNRNPDLO14979 420 aaKnown RBP7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 OGTO15294 1046 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 XPOTO43592 962 aaKnown RBP7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 HCRTO43612 131 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 HYAL3O43820 417 aaPredicted RBP7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 RHOBTB1O94844 696 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 APBB3O95704 486 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 CYP11A1P05108 521 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 HNRNPLP14866 589 aaKnown RBP eCLIP7.47□□□□□ -1.213e-8■■■■□ 21.4
CHCHD3-206ENST00000496427 DRD1P21728 446 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 DHPSP49366 369 aaPredicted RBP7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 TUFMP49411 452 aaKnown RBP7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 ACOT2P49753 483 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 SMTNP53814 917 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 SLC12A3P55017 1021 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 ANAPC15P60006 121 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 CBLBQ13191 982 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 PDIA5Q14554 519 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 DHX8Q14562 1220 aaKnown RBP7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 TMEM132DQ14C87 1099 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 KARSQ15046 597 aaKnown RBP7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 ZNF77Q15935 545 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 DDR2Q16832 855 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 ZC2HC1CQ53FD0 456 aaPredicted RBP7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 DAB2IPQ5VWQ8 1189 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 WSCD1Q658N2 575 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 ANO7Q6IWH7 933 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 CC2D1AQ6P1N0 951 aaPredicted RBP7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 SYT13Q7L8C5 426 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 SFTPA1Q8IWL2 248 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 EFCAB13Q8IY85 973 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 CCDC33Q8N5R6 958 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 FRMD1Q8N878 549 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 KDF1Q8NAX2 398 aaPredicted RBP7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 TSTD1Q8NFU3 115 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 SPPL2BQ8TCT7 592 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 MRPS31Q92665 395 aaKnown RBP7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 CD101Q93033 1021 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 NTPCRQ9BSD7 190 aaKnown RBP7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 MSTO1Q9BUK6 570 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 RAB34Q9BZG1 259 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 ECT2Q9H8V3 914 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 KIF9Q9HAQ2 790 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 C17orf75Q9HAS0 396 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 SLC24A3Q9HC58 644 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 ZDHHC4Q9NPG8 344 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 DUS2Q9NX74 493 aaKnown RBP7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 KLK13Q9UKR3 277 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 TBX20Q9UMR3 447 aa7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 DSPP15924 2871 aaKnown RBP7.47□□□□□ -1.21
CHCHD3-206ENST00000496427 DMXL2Q8TDJ6 3036 aa7.46□□□□□ -1.21
CHCHD3-206ENST00000496427 SPAARA0A1B0GVQ0 90 aa7.46□□□□□ -1.22
CHCHD3-206ENST00000496427 ANO9A1A5B4 782 aa7.46□□□□□ -1.22
CHCHD3-206ENST00000496427 SCAMP3O14828 347 aaKnown RBP7.46□□□□□ -1.22
CHCHD3-206ENST00000496427 KHNYNO15037 678 aaKnown RBP7.46□□□□□ -1.22
CHCHD3-206ENST00000496427 PRPF40AO75400 957 aaKnown RBP7.46□□□□□ -1.22
CHCHD3-206ENST00000496427 ADRB2P07550 413 aa7.46□□□□□ -1.22
CHCHD3-206ENST00000496427 PLA2G4BP0C869 781 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms