RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 C1orf228Q6PIY5 440 aa12.59□□□□□ -0.39
THBS3-208ENST00000496332 ASCL5Q7RTU5 278 aa12.59□□□□□ -0.39
THBS3-208ENST00000496332 ACOT1Q86TX2 421 aa12.59□□□□□ -0.39
THBS3-208ENST00000496332 RALGPS2Q86X27 583 aaPredicted RBP12.59□□□□□ -0.39
THBS3-208ENST00000496332 ARL14EPQ8N8R7 260 aaPredicted RBP12.59□□□□□ -0.39
THBS3-208ENST00000496332 RIN3Q8TB24 985 aa12.59□□□□□ -0.39
THBS3-208ENST00000496332 TAS1R2Q8TE23 839 aa12.59□□□□□ -0.39
THBS3-208ENST00000496332 NKD2Q969F2 451 aaPredicted RBP12.59□□□□□ -0.39
THBS3-208ENST00000496332 FAM83CQ9BQN1 747 aa12.59□□□□□ -0.39
THBS3-208ENST00000496332 MED10Q9BTT4 135 aa12.59□□□□□ -0.39
THBS3-208ENST00000496332 TTLL2Q9BWV7 592 aa12.59□□□□□ -0.39
THBS3-208ENST00000496332 TRPM5Q9NZQ8 1165 aa12.59□□□□□ -0.39
THBS3-208ENST00000496332 GCNT4Q9P109 453 aa12.59□□□□□ -0.39
THBS3-208ENST00000496332 R4GN57 208 aa12.59□□□□□ -0.39
THBS3-208ENST00000496332 COL4A2P08572 1712 aa12.59□□□□□ -0.39
THBS3-208ENST00000496332 ATP8B3O60423 1300 aa12.59□□□□□ -0.39
THBS3-208ENST00000496332 PRR23AA6NEV1 266 aa12.58□□□□□ -0.4
THBS3-208ENST00000496332 GADD45BO75293 160 aaPredicted RBP12.58□□□□□ -0.4
THBS3-208ENST00000496332 EPB41P11171 864 aaKnown RBP12.58□□□□□ -0.4
THBS3-208ENST00000496332 CHRNB1P11230 501 aa12.58□□□□□ -0.4
THBS3-208ENST00000496332 HDCP19113 662 aa12.58□□□□□ -0.4
THBS3-208ENST00000496332 GTF2H1P32780 548 aa12.58□□□□□ -0.4
THBS3-208ENST00000496332 CTHP32929 405 aa12.58□□□□□ -0.4
THBS3-208ENST00000496332 NDST1P52848 882 aa12.58□□□□□ -0.4
THBS3-208ENST00000496332 MCCD1P59942 119 aaPredicted RBP12.58□□□□□ -0.4
THBS3-208ENST00000496332 CSTF1Q05048 431 aaKnown RBP12.58□□□□□ -0.4
THBS3-208ENST00000496332 MTAPQ13126 283 aa12.58□□□□□ -0.4
THBS3-208ENST00000496332 ANKRD40Q6AI12 368 aa12.58□□□□□ -0.4
THBS3-208ENST00000496332 TRIM68Q6AZZ1 485 aa12.58□□□□□ -0.4
THBS3-208ENST00000496332 CC2D1AQ6P1N0 951 aaPredicted RBP12.58□□□□□ -0.4
THBS3-208ENST00000496332 TXNDC11Q6PKC3 985 aa12.58□□□□□ -0.4
THBS3-208ENST00000496332 PAQR9Q6ZVX9 377 aa12.58□□□□□ -0.4
THBS3-208ENST00000496332 FAM35AQ86V20 835 aa12.58□□□□□ -0.4
THBS3-208ENST00000496332 UNC93AQ86WB7 457 aa12.58□□□□□ -0.4
THBS3-208ENST00000496332 CRYBG2Q8N1P7 616 aa12.58□□□□□ -0.4
THBS3-208ENST00000496332 TTC16Q8NEE8 873 aa12.58□□□□□ -0.4
THBS3-208ENST00000496332 NUP210Q8TEM1 1887 aaPredicted RBP12.58□□□□□ -0.4
THBS3-208ENST00000496332 KCNK16Q96T55 309 aa12.58□□□□□ -0.4
THBS3-208ENST00000496332 TSG101Q99816 390 aa12.58□□□□□ -0.4
THBS3-208ENST00000496332 GTPBP4Q9BZE4 634 aaKnown RBP12.58□□□□□ -0.4
THBS3-208ENST00000496332 IMPG2Q9BZV3 1241 aa12.58□□□□□ -0.4
THBS3-208ENST00000496332 CHRDQ9H2X0 955 aa12.58□□□□□ -0.4
THBS3-208ENST00000496332 EBF3Q9H4W6 596 aa12.58□□□□□ -0.4
THBS3-208ENST00000496332 APOBEC3GQ9HC16 384 aaKnown RBP12.58□□□□□ -0.4
THBS3-208ENST00000496332 TMEM8AQ9HCN3 771 aa12.58□□□□□ -0.4
THBS3-208ENST00000496332 HMGXB4Q9UGU5 601 aa12.58□□□□□ -0.4
THBS3-208ENST00000496332 FBXO4Q9UKT5 387 aa12.58□□□□□ -0.4
THBS3-208ENST00000496332 TICRRQ7Z2Z1 1910 aa12.58□□□□□ -0.4
THBS3-208ENST00000496332 ZNF840PA6NDX5 716 aa12.57□□□□□ -0.4
THBS3-208ENST00000496332 STX10O60499 249 aa12.57□□□□□ -0.4
THBS3-208ENST00000496332 KINO60870 393 aaKnown RBP12.57□□□□□ -0.4
THBS3-208ENST00000496332 ABL1P00519 1130 aa12.57□□□□□ -0.4
THBS3-208ENST00000496332 CCDC130P13994 396 aa12.57□□□□□ -0.4
THBS3-208ENST00000496332 PPP3CCP48454 512 aa12.57□□□□□ -0.4
THBS3-208ENST00000496332 PMS1P54277 932 aaKnown RBP12.57□□□□□ -0.4
THBS3-208ENST00000496332 IFRD2Q12894 506 aaPredicted RBP12.57□□□□□ -0.4
THBS3-208ENST00000496332 TAF10Q12962 218 aa12.57□□□□□ -0.4
THBS3-208ENST00000496332 RUNX3Q13761 415 aa12.57□□□□□ -0.4
THBS3-208ENST00000496332 MTF1Q14872 753 aa12.57□□□□□ -0.4
THBS3-208ENST00000496332 PON2Q15165 354 aa12.57□□□□□ -0.4
THBS3-208ENST00000496332 PDGFRLQ15198 375 aa12.57□□□□□ -0.4
THBS3-208ENST00000496332 ZNF528Q3MIS6 628 aa12.57□□□□□ -0.4
THBS3-208ENST00000496332 KRT39Q6A163 491 aa12.57□□□□□ -0.4
THBS3-208ENST00000496332 ISM2Q6H9L7 571 aa12.57□□□□□ -0.4
THBS3-208ENST00000496332 ELOA2Q8IYF1 753 aaPredicted RBP12.57□□□□□ -0.4
THBS3-208ENST00000496332 FUKQ8N0W3 1084 aa12.57□□□□□ -0.4
THBS3-208ENST00000496332 ADSSL1Q8N142 457 aa12.57□□□□□ -0.4
THBS3-208ENST00000496332 NUP93Q8N1F7 819 aa12.57□□□□□ -0.4
THBS3-208ENST00000496332 C12orf29Q8N999 325 aa12.57□□□□□ -0.4
THBS3-208ENST00000496332 CCDC150Q8NCX0 1101 aa12.57□□□□□ -0.4
THBS3-208ENST00000496332 SLC2A14Q8TDB8 520 aa12.57□□□□□ -0.4
THBS3-208ENST00000496332 CYP3A43Q9HB55 503 aa12.57□□□□□ -0.4
THBS3-208ENST00000496332 HPS4Q9NQG7 708 aa12.57□□□□□ -0.4
THBS3-208ENST00000496332 CIZ1Q9ULV3 898 aaPredicted RBP12.57□□□□□ -0.4
THBS3-208ENST00000496332 MIA3Q5JRA6 1907 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 TRIM49BA6NDI0 452 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 OTOL1A6NHN0 477 aaPredicted RBP12.56□□□□□ -0.4
THBS3-208ENST00000496332 AP1G2O75843 785 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 RTN3O95197 1032 aaPredicted RBP12.56□□□□□ -0.4
THBS3-208ENST00000496332 ARSAP15289 507 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 PFKLP17858 780 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 CD58P19256 250 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 YWHAQP27348 245 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 MXI1P50539 228 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 PDE6CP51160 858 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 FKBP3Q00688 224 aaKnown RBP12.56□□□□□ -0.4
THBS3-208ENST00000496332 INCA1Q0VD86 236 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 LRRC32Q14392 662 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 ZNF77Q15935 545 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 WDR44Q5JSH3 913 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 ZC3H14Q6PJT7 736 aaKnown RBP12.56□□□□□ -0.4
THBS3-208ENST00000496332 TSSK4Q6SA08 328 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 ZC3H3Q8IXZ2 948 aaKnown RBP12.56□□□□□ -0.4
THBS3-208ENST00000496332 SCAMP5Q8TAC9 235 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 SH3RF2Q8TEC5 729 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 SEMA4DQ92854 862 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 SMARCD1Q96GM5 515 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 SLITRK1Q96PX8 696 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 TWNKQ96RR1 684 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 IER2Q9BTL4 223 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms