RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 INTS8Q75QN2 995 aaKnown RBP11.18□□□□□ -0.62
ERGIC3-219ENST00000496172 FMR1NBQ8N0W7 255 aaPredicted RBP11.18□□□□□ -0.62
ERGIC3-219ENST00000496172 MYCBPAPQ8TBZ2 947 aa11.18□□□□□ -0.62
ERGIC3-219ENST00000496172 PLEKHO2Q8TD55 490 aa11.18□□□□□ -0.62
ERGIC3-219ENST00000496172 CSGALNACT1Q8TDX6 532 aa11.18□□□□□ -0.62
ERGIC3-219ENST00000496172 TAF4BQ92750 862 aa11.18□□□□□ -0.62
ERGIC3-219ENST00000496172 MYLPFQ96A32 169 aa11.18□□□□□ -0.62
ERGIC3-219ENST00000496172 CEP295NLQ96MC4 621 aa11.18□□□□□ -0.62
ERGIC3-219ENST00000496172 GSDMAQ96QA5 445 aa11.18□□□□□ -0.62
ERGIC3-219ENST00000496172 GZF1Q9H116 711 aaPredicted RBP11.18□□□□□ -0.62
ERGIC3-219ENST00000496172 XYLT2Q9H1B5 865 aa11.18□□□□□ -0.62
ERGIC3-219ENST00000496172 VRTNQ9H8Y1 702 aa11.18□□□□□ -0.62
ERGIC3-219ENST00000496172 IL21Q9HBE4 155 aa11.18□□□□□ -0.62
ERGIC3-219ENST00000496172 HEBP1Q9NRV9 189 aa11.18□□□□□ -0.62
ERGIC3-219ENST00000496172 SEMA4GQ9NTN9 838 aa11.18□□□□□ -0.62
ERGIC3-219ENST00000496172 RAB23Q9ULC3 237 aa11.18□□□□□ -0.62
ERGIC3-219ENST00000496172 COL4A2P08572 1712 aa11.18□□□□□ -0.62
ERGIC3-219ENST00000496172 ATP8B3O60423 1300 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 TRIM66O15016 1216 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 CHADO15335 359 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 NOL4O94818 638 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 F11P03951 625 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 HOXB3P14651 431 aaPredicted RBP11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 HMGA1P17096 107 aaKnown RBP11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 PTPN1P18031 435 aaKnown RBP11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 TRIM21P19474 475 aaKnown RBP11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 BDNFP23560 247 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 PIK3CAP42336 1068 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 DLG4P78352 724 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 PLCB2Q00722 1185 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 ENPEPQ07075 957 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 EDRF1Q3B7T1 1238 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 ZACNQ401N2 412 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 ARHGAP29Q52LW3 1261 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 SDHAF4Q5VUM1 108 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 C1orf228Q6PIY5 440 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 SV2AQ7L0J3 742 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 GPIHBP1Q8IV16 184 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 FAM186BQ8IYM0 893 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 CMTM8Q8IZV2 173 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 MAB21L3Q8N8X9 362 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 CCDC150Q8NCX0 1101 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 SMARCE1Q969G3 411 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 TRMT2BQ96GJ1 504 aaKnown RBP11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 MSANTD3Q96H12 275 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 PCED1BQ96HM7 432 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 SPATA17Q96L03 361 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 TIGD1Q96MW7 591 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 TSG101Q99816 390 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 SLC46A2Q9BY10 475 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 IMPG2Q9BZV3 1241 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 CHRDQ9H2X0 955 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 CRTAC1Q9NQ79 661 aa11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 SETXQ7Z333 2677 aaKnown RBP11.17□□□□□ -0.62
ERGIC3-219ENST00000496172 TM4SF5O14894 197 aa11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 CETN3O15182 167 aa11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 STX10O60499 249 aa11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 AKAP3O75969 853 aa11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 CD72P21854 359 aa11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 PDE6CP51160 858 aa11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 KPNA1P52294 538 aaPredicted RBP11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 MLLT6P55198 1093 aaPredicted RBP11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 FCHO2Q0JRZ9 810 aa11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 MTAPQ13126 283 aa11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 PPP2R5DQ14738 602 aa11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 ZNF658Q5TYW1 1059 aaPredicted RBP11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 TSSK4Q6SA08 328 aa11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 MON1AQ86VX9 555 aa11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 ZNF687Q8N1G0 1237 aa11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 B3GALNT2Q8NCR0 500 aa11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 ENGASEQ8NFI3 743 aa11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 BPIFB1Q8TDL5 484 aa11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 FAM3CQ92520 227 aa11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 TNIP3Q96KP6 325 aa11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 MYRFLQ96LU7 910 aa11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 MKNK1Q9BUB5 465 aa11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 ELOVL4Q9GZR5 314 aa11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 DNAI2Q9GZS0 605 aa11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 SMYD3Q9H7B4 428 aa11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 C8orf33Q9H7E9 229 aaPredicted RBP11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 KIF9Q9HAQ2 790 aa11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 CIZ1Q9ULV3 898 aaPredicted RBP11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 PIAS3Q9Y6X2 628 aa11.16□□□□□ -0.62
ERGIC3-219ENST00000496172 TRAV19A0A0A6YYK7 116 aa11.15□□□□□ -0.62
ERGIC3-219ENST00000496172 SHISA7A6NL88 538 aa11.15□□□□□ -0.62
ERGIC3-219ENST00000496172 VNN1O95497 513 aa11.15□□□□□ -0.62
ERGIC3-219ENST00000496172 EPB41P11171 864 aaKnown RBP11.15□□□□□ -0.62
ERGIC3-219ENST00000496172 GTF2H1P32780 548 aa11.15□□□□□ -0.62
ERGIC3-219ENST00000496172 PPP3CCP48454 512 aa11.15□□□□□ -0.62
ERGIC3-219ENST00000496172 CDH8P55286 799 aa11.15□□□□□ -0.62
ERGIC3-219ENST00000496172 STIM1Q13586 685 aa11.15□□□□□ -0.62
ERGIC3-219ENST00000496172 CCDC142Q17RM4 750 aa11.15□□□□□ -0.62
ERGIC3-219ENST00000496172 N4BP2L1Q5TBK1 243 aaPredicted RBP11.15□□□□□ -0.62
ERGIC3-219ENST00000496172 TXNDC8Q6A555 127 aa11.15□□□□□ -0.62
ERGIC3-219ENST00000496172 CC2D1AQ6P1N0 951 aaPredicted RBP11.15□□□□□ -0.62
ERGIC3-219ENST00000496172 SCARA5Q6ZMJ2 495 aa11.15□□□□□ -0.62
ERGIC3-219ENST00000496172 DENND5BQ6ZUT9 1274 aa11.15□□□□□ -0.62
ERGIC3-219ENST00000496172 TMEM150AQ86TG1 271 aa11.15□□□□□ -0.62
ERGIC3-219ENST00000496172 SMYD4Q8IYR2 804 aaPredicted RBP11.15□□□□□ -0.62
ERGIC3-219ENST00000496172 KDF1Q8NAX2 398 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms