RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 RFWD2Q8NHY2 731 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 SYT11Q9BT88 431 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 SIK2Q9H0K1 926 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 NOP53Q9NZM5 478 aaKnown RBP14.06□□□□□ -0.16
GPC1-209ENST00000495100 FAM237BA0A1B0GVD1 139 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 KCNK1O00180 336 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 NEMP1O14524 444 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 DNALI1O14645 258 aaPredicted RBP14.06□□□□□ -0.16
GPC1-209ENST00000495100 OGTO15294 1046 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 GRIN3BO60391 1043 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 INSRRP14616 1297 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 NAMPTP43490 491 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 OLIG2Q13516 323 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 PTK6Q13882 451 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 CFAP157Q5JU67 520 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 CRELD2Q6UXH1 353 aaPredicted RBP14.06□□□□□ -0.16
GPC1-209ENST00000495100 DENND5BQ6ZUT9 1274 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 CCDC125Q86Z20 511 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 EXD1Q8NHP7 514 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 LENG1Q96BZ8 264 aaPredicted RBP14.06□□□□□ -0.16
GPC1-209ENST00000495100 FAM136AQ96C01 138 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 TSSK1BQ9BXA7 367 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 OSBPL1AQ9BXW6 950 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 PSMC3IPQ9P2W1 217 aaPredicted RBP14.06□□□□□ -0.16
GPC1-209ENST00000495100 ZMPSTE24O75844 475 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 TAC1P20366 129 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 SDC4P31431 198 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 VCPP55072 806 aaKnown RBP14.06□□□□□ -0.16
GPC1-209ENST00000495100 GOLGA7BQ2TAP0 167 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 PRAMEF19Q5SWL8 479 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 NDUFAF2Q8N183 169 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 AFG1LQ8WV93 481 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 MOCOSQ96EN8 888 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 MRIQ9BWK5 157 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 TMPRSS4Q9NRS4 437 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 ASAP2O43150 1006 aa14.05□□□□□ -0.16
GPC1-209ENST00000495100 GRIA1P42261 906 aa14.05□□□□□ -0.16
GPC1-209ENST00000495100 PCGF5Q86SE9 256 aa14.05□□□□□ -0.16
GPC1-209ENST00000495100 CKAP2Q8WWK9 683 aa14.05□□□□□ -0.16
GPC1-209ENST00000495100 CD101Q93033 1021 aa14.05□□□□□ -0.16
GPC1-209ENST00000495100 TRIM55Q9BYV6 548 aa14.05□□□□□ -0.16
GPC1-209ENST00000495100 CPSF2Q9P2I0 782 aaKnown RBP14.05□□□□□ -0.16
GPC1-209ENST00000495100 ARHGAP28Q9P2N2 729 aa14.05□□□□□ -0.16
GPC1-209ENST00000495100 ABCA3Q99758 1704 aa14.05□□□□□ -0.16
GPC1-209ENST00000495100 HAUS5O94927 633 aa14.05□□□□□ -0.16
GPC1-209ENST00000495100 CTSHP09668 335 aa14.05□□□□□ -0.16
GPC1-209ENST00000495100 TGFB2P61812 414 aa14.05□□□□□ -0.16
GPC1-209ENST00000495100 CENPCQ03188 943 aa14.05□□□□□ -0.16
GPC1-209ENST00000495100 SAMD3Q8N6K7 520 aa14.05□□□□□ -0.16
GPC1-209ENST00000495100 MORC4Q8TE76 937 aa14.05□□□□□ -0.16
GPC1-209ENST00000495100 HASPINQ8TF76 798 aa14.05□□□□□ -0.16
GPC1-209ENST00000495100 PGBD4Q96DM1 585 aa14.05□□□□□ -0.16
GPC1-209ENST00000495100 TSPAN16Q9UKR8 245 aa14.05□□□□□ -0.16
GPC1-209ENST00000495100 LRCH4O75427 683 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 DGKIO75912 1065 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 ERBB2P04626 1255 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 MYL2P10916 166 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 FOXR2Q6PJQ5 311 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 C6orf89Q6UWU4 347 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 OLIG1Q8TAK6 271 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 FAM172AQ8WUF8 416 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 CLPTM1LQ96KA5 538 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 GMLQ99445 158 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 THTPAQ9BU02 230 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 ROPN1BQ9BZX4 212 aaPredicted RBP14.04□□□□□ -0.16
GPC1-209ENST00000495100 SPATC1LQ9H0A9 340 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 ROPN1Q9HAT0 212 aaPredicted RBP14.04□□□□□ -0.16
GPC1-209ENST00000495100 SETD4Q9NVD3 440 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 NUDT5Q9UKK9 219 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 ANKRD12Q6UB98 2062 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 A0A0B4J269 797 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 KCNA4P22459 653 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 MMP8P22894 467 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 ARL1P40616 181 aaPredicted RBP14.04□□□□□ -0.16
GPC1-209ENST00000495100 PEX6Q13608 980 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 CHI3L2Q15782 390 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 SPNS2Q8IVW8 549 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 CLEC4CQ8WTT0 213 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 ZNF75CPQ92670 426 aaPredicted RBP14.04□□□□□ -0.16
GPC1-209ENST00000495100 PRR11Q96HE9 360 aaPredicted RBP14.04□□□□□ -0.16
GPC1-209ENST00000495100 MMP19Q99542 508 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 OSMRQ99650 979 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 KDM4CQ9H3R0 1056 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 RNF181Q9P0P0 153 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 MICAL2O94851 1124 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 TMEM63AO94886 807 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 CCDC130P13994 396 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 MSX2P35548 267 aaPredicted RBP14.04□□□□□ -0.16
GPC1-209ENST00000495100 GEMIN4P57678 1058 aaKnown RBP14.04□□□□□ -0.16
GPC1-209ENST00000495100 PTPN11Q06124 597 aaPredicted RBP14.04□□□□□ -0.16
GPC1-209ENST00000495100 DCAF6Q58WW2 860 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 FAM228AQ86W67 206 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 NUDCD3Q8IVD9 361 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 RNF148Q8N7C7 305 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 SGF29Q96ES7 293 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 MANSC1Q9H8J5 431 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 SNTG2Q9NY99 539 aa14.04□□□□□ -0.16
GPC1-209ENST00000495100 TMEM191CA6NGB0 347 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 GPR25O00155 361 aa14.03□□□□□ -0.16
GPC1-209ENST00000495100 PSTPIP1O43586 416 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms