RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 DLATP10515 647 aaKnown RBP23.58■■□□□ 1.37
HDDC3-203ENST00000494993 PFKLP17858 780 aa23.58■■□□□ 1.37
HDDC3-203ENST00000494993 TNNI1P19237 187 aa23.58■■□□□ 1.37
HDDC3-203ENST00000494993 ANXA13P27216 316 aa23.58■■□□□ 1.37
HDDC3-203ENST00000494993 RAP1GAPP47736 663 aa23.58■■□□□ 1.37
HDDC3-203ENST00000494993 PDE6CP51160 858 aa23.58■■□□□ 1.37
HDDC3-203ENST00000494993 USP46P62068 366 aa23.58■■□□□ 1.37
HDDC3-203ENST00000494993 PSMD6Q15008 389 aa23.58■■□□□ 1.37
HDDC3-203ENST00000494993 SHC4Q6S5L8 630 aa23.58■■□□□ 1.37
HDDC3-203ENST00000494993 MYCBPAPQ8TBZ2 947 aa23.58■■□□□ 1.37
HDDC3-203ENST00000494993 HHIPQ96QV1 700 aa23.58■■□□□ 1.37
HDDC3-203ENST00000494993 FNBP1Q96RU3 617 aa23.58■■□□□ 1.37
HDDC3-203ENST00000494993 C7orf25Q9BPX7 421 aa23.58■■□□□ 1.37
HDDC3-203ENST00000494993 MRPL45Q9BRJ2 306 aaKnown RBP23.58■■□□□ 1.37
HDDC3-203ENST00000494993 ARRDC1-AS1Q9H2J1 176 aa23.58■■□□□ 1.37
HDDC3-203ENST00000494993 TRPM5Q9NZQ8 1165 aa23.58■■□□□ 1.37
HDDC3-203ENST00000494993 TRIM66O15016 1216 aa23.57■■□□□ 1.36
HDDC3-203ENST00000494993 CLIC2O15247 247 aa23.57■■□□□ 1.36
HDDC3-203ENST00000494993 TACC1O75410 805 aa23.57■■□□□ 1.36
HDDC3-203ENST00000494993 CYP2J2P51589 502 aa23.57■■□□□ 1.36
HDDC3-203ENST00000494993 CYP24A1Q07973 514 aa23.57■■□□□ 1.36
HDDC3-203ENST00000494993 NR1H3Q13133 447 aa23.57■■□□□ 1.36
HDDC3-203ENST00000494993 MDH1BQ5I0G3 518 aa23.57■■□□□ 1.36
HDDC3-203ENST00000494993 PPM1JQ5JR12 505 aa23.57■■□□□ 1.36
HDDC3-203ENST00000494993 SYT13Q7L8C5 426 aa23.57■■□□□ 1.36
HDDC3-203ENST00000494993 ACDQ96AP0 544 aa23.57■■□□□ 1.36
HDDC3-203ENST00000494993 CNTNAP3BQ96NU0 1288 aa23.57■■□□□ 1.36
HDDC3-203ENST00000494993 TTLL2Q9BWV7 592 aa23.57■■□□□ 1.36
HDDC3-203ENST00000494993 CNTNAP3Q9BZ76 1288 aa23.57■■□□□ 1.36
HDDC3-203ENST00000494993 LINC00597Q9H2U6 94 aa23.57■■□□□ 1.36
HDDC3-203ENST00000494993 SNX25Q9H3E2 840 aa23.57■■□□□ 1.36
HDDC3-203ENST00000494993 EHD2Q9NZN4 543 aa23.57■■□□□ 1.36
HDDC3-203ENST00000494993 NME7Q9Y5B8 376 aa23.57■■□□□ 1.36
HDDC3-203ENST00000494993 THADAQ6YHU6 1953 aa23.57■■□□□ 1.36
HDDC3-203ENST00000494993 ABCA7Q8IZY2 2146 aa23.56■■□□□ 1.36
HDDC3-203ENST00000494993 NFATC1O95644 943 aa23.56■■□□□ 1.36
HDDC3-203ENST00000494993 ADRB1P08588 477 aa23.56■■□□□ 1.36
HDDC3-203ENST00000494993 GNL1P36915 607 aaPredicted RBP23.56■■□□□ 1.36
HDDC3-203ENST00000494993 SNRPFP62306 86 aaKnown RBP23.56■■□□□ 1.36
HDDC3-203ENST00000494993 ZXDBP98169 803 aa23.56■■□□□ 1.36
HDDC3-203ENST00000494993 EHHADHQ08426 723 aa23.56■■□□□ 1.36
HDDC3-203ENST00000494993 AASDHQ4L235 1098 aaPredicted RBP23.56■■□□□ 1.36
HDDC3-203ENST00000494993 UNC13DQ70J99 1090 aa23.56■■□□□ 1.36
HDDC3-203ENST00000494993 NELFCDQ8IXH7 590 aa23.56■■□□□ 1.36
HDDC3-203ENST00000494993 XXYLT1Q8NBI6 393 aa23.56■■□□□ 1.36
HDDC3-203ENST00000494993 OR6B3Q8NGW1 331 aa23.56■■□□□ 1.36
HDDC3-203ENST00000494993 SCFD1Q8WVM8 642 aa23.56■■□□□ 1.36
HDDC3-203ENST00000494993 CCDC127Q96BQ5 260 aa23.56■■□□□ 1.36
HDDC3-203ENST00000494993 ZC3H10Q96K80 434 aaKnown RBP23.56■■□□□ 1.36
HDDC3-203ENST00000494993 MAGEF1Q9HAY2 307 aa23.56■■□□□ 1.36
HDDC3-203ENST00000494993 F8VP50 259 aa23.55■■□□□ 1.36
HDDC3-203ENST00000494993 FAM163BP0C2L3 166 aa23.55■■□□□ 1.36
HDDC3-203ENST00000494993 ZNF806P0C7X5 589 aa23.55■■□□□ 1.36
HDDC3-203ENST00000494993 TNNC1P63316 161 aa23.55■■□□□ 1.36
HDDC3-203ENST00000494993 NOP14P78316 857 aaKnown RBP23.55■■□□□ 1.36
HDDC3-203ENST00000494993 PSMD2Q13200 908 aa23.55■■□□□ 1.36
HDDC3-203ENST00000494993 DMC1Q14565 340 aa23.55■■□□□ 1.36
HDDC3-203ENST00000494993 SF3A2Q15428 464 aaKnown RBP23.55■■□□□ 1.36
HDDC3-203ENST00000494993 CCDC6Q16204 474 aa23.55■■□□□ 1.36
HDDC3-203ENST00000494993 HS2ST1Q7LGA3 356 aa23.55■■□□□ 1.36
HDDC3-203ENST00000494993 C12orf50Q8NA57 414 aaPredicted RBP23.55■■□□□ 1.36
HDDC3-203ENST00000494993 C8orf48Q96LL4 319 aa23.55■■□□□ 1.36
HDDC3-203ENST00000494993 EPG5Q9HCE0 2579 aa23.55■■□□□ 1.36
HDDC3-203ENST00000494993 LEFTY2O00292 366 aa23.54■■□□□ 1.36
HDDC3-203ENST00000494993 PPP3CCP48454 512 aa23.54■■□□□ 1.36
HDDC3-203ENST00000494993 LIMK1P53667 647 aa23.54■■□□□ 1.36
HDDC3-203ENST00000494993 WDR72Q3MJ13 1102 aa23.54■■□□□ 1.36
HDDC3-203ENST00000494993 BACH2Q9BYV9 841 aa23.54■■□□□ 1.36
HDDC3-203ENST00000494993 PCDHGA5Q9Y5G8 931 aa23.54■■□□□ 1.36
HDDC3-203ENST00000494993 MYO18AQ92614 2054 aaKnown RBP23.54■■□□□ 1.36
HDDC3-203ENST00000494993 ZNF840PA6NDX5 716 aa23.53■■□□□ 1.36
HDDC3-203ENST00000494993 POLR2DO15514 142 aaKnown RBP23.53■■□□□ 1.36
HDDC3-203ENST00000494993 APBB3O95704 486 aa23.53■■□□□ 1.36
HDDC3-203ENST00000494993 STAU1O95793 577 aaKnown RBP23.53■■□□□ 1.36
HDDC3-203ENST00000494993 PTPN1P18031 435 aaKnown RBP23.53■■□□□ 1.36
HDDC3-203ENST00000494993 CASP1P29466 404 aa23.53■■□□□ 1.36
HDDC3-203ENST00000494993 SLC7A9P82251 487 aa23.53■■□□□ 1.36
HDDC3-203ENST00000494993 BMT2Q1RMZ1 405 aa23.53■■□□□ 1.36
HDDC3-203ENST00000494993 PLK5Q496M5 336 aa23.53■■□□□ 1.36
HDDC3-203ENST00000494993 PLA2G2CQ5R387 149 aa23.53■■□□□ 1.36
HDDC3-203ENST00000494993 C12orf56Q8IXR9 622 aa23.53■■□□□ 1.36
HDDC3-203ENST00000494993 CCDC26Q8TAB7 109 aa23.53■■□□□ 1.36
HDDC3-203ENST00000494993 DDX1Q92499 740 aaKnown RBP23.53■■□□□ 1.36
HDDC3-203ENST00000494993 ZNF516Q92618 1163 aa23.53■■□□□ 1.36
HDDC3-203ENST00000494993 ELOVL4Q9GZR5 314 aa23.53■■□□□ 1.36
HDDC3-203ENST00000494993 GZF1Q9H116 711 aaPredicted RBP23.53■■□□□ 1.36
HDDC3-203ENST00000494993 BLZF1Q9H2G9 400 aa23.53■■□□□ 1.36
HDDC3-203ENST00000494993 DPEP3Q9H4B8 488 aa23.53■■□□□ 1.36
HDDC3-203ENST00000494993 TMEM30AQ9NV96 361 aa23.53■■□□□ 1.36
HDDC3-203ENST00000494993 EBF1Q9UH73 591 aa23.53■■□□□ 1.36
HDDC3-203ENST00000494993 OLFM2O95897 454 aa23.52■■□□□ 1.36
HDDC3-203ENST00000494993 OPRD1P41143 372 aa23.52■■□□□ 1.36
HDDC3-203ENST00000494993 CACNA2D1P54289 1103 aa23.52■■□□□ 1.36
HDDC3-203ENST00000494993 MYL6P60660 151 aa23.52■■□□□ 1.36
HDDC3-203ENST00000494993 TRPC3Q13507 836 aa23.52■■□□□ 1.36
HDDC3-203ENST00000494993 IL31Q6EBC2 164 aa23.52■■□□□ 1.36
HDDC3-203ENST00000494993 KIAA1958Q8N8K9 716 aa23.52■■□□□ 1.36
HDDC3-203ENST00000494993 RNF38Q9H0F5 515 aa23.52■■□□□ 1.36
HDDC3-203ENST00000494993 DUSP15Q9H1R2 295 aaPredicted RBP23.52■■□□□ 1.36
HDDC3-203ENST00000494993 CGNQ9P2M7 1197 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms