RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 MRPS5P82675 430 aaKnown RBP16.06■□□□□ 0.16
SDF4-207ENST00000494748 SLC25A11Q02978 314 aaKnown RBP16.06■□□□□ 0.16
SDF4-207ENST00000494748 ARHGAP22Q7Z5H3 698 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 UNC45BQ8IWX7 931 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 GBP5Q96PP8 586 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 EBF3Q9H4W6 596 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 PDLIM7Q9NR12 457 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 NDC80O14777 642 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 NLRP11P59045 1033 aaKnown RBP16.06■□□□□ 0.16
SDF4-207ENST00000494748 GHRHRQ02643 423 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 TRMT5Q32P41 509 aaKnown RBP16.06■□□□□ 0.16
SDF4-207ENST00000494748 KBTBD12Q3ZCT8 623 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 LIN52Q52LA3 116 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 TMCO4Q5TGY1 634 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 C7orf26Q96N11 449 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 FNBP1Q96RU3 617 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 C17orf75Q9HAS0 396 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 GINM1Q9NU53 330 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 ZDHHC7Q9NXF8 308 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 CHMP2BQ9UQN3 213 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 TEX264Q9Y6I9 313 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 PDLIM1O00151 329 aa16.05■□□□□ 0.16
SDF4-207ENST00000494748 STIP1P31948 543 aaKnown RBP16.05■□□□□ 0.16
SDF4-207ENST00000494748 RBM5P52756 815 aaKnown RBP eCLIP16.05■□□□□ 0.168e-6■■■■□ 20.7
SDF4-207ENST00000494748 ZRSR2Q15696 482 aaKnown RBP16.05■□□□□ 0.16
SDF4-207ENST00000494748 MDH1BQ5I0G3 518 aa16.05■□□□□ 0.16
SDF4-207ENST00000494748 USP37Q86T82 979 aa16.05■□□□□ 0.16
SDF4-207ENST00000494748 PRPF39Q86UA1 669 aaKnown RBP16.05■□□□□ 0.16
SDF4-207ENST00000494748 WDTC1Q8N5D0 677 aa16.05■□□□□ 0.16
SDF4-207ENST00000494748 B4GALNT2Q8NHY0 566 aa16.05■□□□□ 0.16
SDF4-207ENST00000494748 GPAMQ9HCL2 828 aa16.05■□□□□ 0.16
SDF4-207ENST00000494748 IL1R2P27930 398 aa16.05■□□□□ 0.16
SDF4-207ENST00000494748 MSLNQ13421 630 aaPredicted RBP16.05■□□□□ 0.16
SDF4-207ENST00000494748 MTMR1Q13613 665 aa16.05■□□□□ 0.16
SDF4-207ENST00000494748 TAB3Q8N5C8 712 aaPredicted RBP16.05■□□□□ 0.16
SDF4-207ENST00000494748 ZNF606Q8WXB4 792 aa16.05■□□□□ 0.16
SDF4-207ENST00000494748 XPO7Q9UIA9 1087 aaKnown RBP16.05■□□□□ 0.16
SDF4-207ENST00000494748 SLC4A7Q9Y6M7 1214 aa16.05■□□□□ 0.16
SDF4-207ENST00000494748 A0A088AWK7 358 aa16.05■□□□□ 0.16
SDF4-207ENST00000494748 HNRNPDLO14979 420 aaKnown RBP16.05■□□□□ 0.16
SDF4-207ENST00000494748 EXTL3O43909 919 aa16.05■□□□□ 0.16
SDF4-207ENST00000494748 ENTPD3O75355 529 aa16.05■□□□□ 0.16
SDF4-207ENST00000494748 ELK3P41970 407 aa16.05■□□□□ 0.16
SDF4-207ENST00000494748 FKBP1AP62942 108 aaKnown RBP16.05■□□□□ 0.16
SDF4-207ENST00000494748 DYNC1I2Q13409 638 aaKnown RBP16.05■□□□□ 0.16
SDF4-207ENST00000494748 BBS9Q3SYG4 887 aa16.05■□□□□ 0.16
SDF4-207ENST00000494748 WDR44Q5JSH3 913 aa16.05■□□□□ 0.16
SDF4-207ENST00000494748 KYAT3Q6YP21 454 aaKnown RBP16.05■□□□□ 0.16
SDF4-207ENST00000494748 MASTLQ96GX5 879 aa16.05■□□□□ 0.16
SDF4-207ENST00000494748 CSRNP1Q96S65 589 aa16.05■□□□□ 0.16
SDF4-207ENST00000494748 CYTH2Q99418 400 aa16.05■□□□□ 0.16
SDF4-207ENST00000494748 LGR5O75473 907 aa16.04■□□□□ 0.16
SDF4-207ENST00000494748 BST1Q10588 318 aa16.04■□□□□ 0.16
SDF4-207ENST00000494748 VPS72Q15906 364 aa16.04■□□□□ 0.16
SDF4-207ENST00000494748 PDSS2Q86YH6 399 aa16.04■□□□□ 0.16
SDF4-207ENST00000494748 ARHGAP24Q8N264 748 aa16.04■□□□□ 0.16
SDF4-207ENST00000494748 CHURC1Q8WUH1 139 aa16.04■□□□□ 0.16
SDF4-207ENST00000494748 SRPK1Q96SB4 655 aaKnown RBP16.04■□□□□ 0.16
SDF4-207ENST00000494748 XPNPEP1Q9NQW7 623 aa16.04■□□□□ 0.16
SDF4-207ENST00000494748 SIRPGQ9P1W8 387 aa16.04■□□□□ 0.16
SDF4-207ENST00000494748 SERPINA10Q9UK55 444 aa16.04■□□□□ 0.16
SDF4-207ENST00000494748 ZNF862O60290 1169 aa16.04■□□□□ 0.16
SDF4-207ENST00000494748 PTGER2P43116 358 aa16.04■□□□□ 0.16
SDF4-207ENST00000494748 DYNLT1P63172 113 aa16.04■□□□□ 0.16
SDF4-207ENST00000494748 PLCB3Q01970 1234 aa16.04■□□□□ 0.16
SDF4-207ENST00000494748 CBLBQ13191 982 aa16.04■□□□□ 0.16
SDF4-207ENST00000494748 LSAMPQ13449 338 aa16.04■□□□□ 0.16
SDF4-207ENST00000494748 GRM2Q14416 872 aa16.04■□□□□ 0.16
SDF4-207ENST00000494748 ADGRG6Q86SQ4 1221 aa16.04■□□□□ 0.16
SDF4-207ENST00000494748 PALM2Q8IXS6 379 aa16.04■□□□□ 0.16
SDF4-207ENST00000494748 KIAA0319LQ8IZA0 1049 aa16.04■□□□□ 0.16
SDF4-207ENST00000494748 DDX56Q9NY93 547 aaKnown RBP16.04■□□□□ 0.16
SDF4-207ENST00000494748 TAGLN3Q9UI15 199 aa16.04■□□□□ 0.16
SDF4-207ENST00000494748 FER1L6Q2WGJ9 1857 aa16.04■□□□□ 0.16
SDF4-207ENST00000494748 IQANK1A0A1B0GTG1 560 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 KBTBD13C9JR72 458 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 CD48P09326 243 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 ZBTB41Q5SVQ8 909 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 STRIP1Q5VSL9 837 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 BBS12Q6ZW61 710 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 PODNQ7Z5L7 613 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 NDNQ99608 321 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 GLIS2Q9BZE0 524 aaPredicted RBP16.03■□□□□ 0.16
SDF4-207ENST00000494748 C1orf21Q9H246 121 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 EFR3BQ9Y2G0 817 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 TTLL3Q9Y4R7 772 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 STYXL1Q9Y6J8 313 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 A0A0B4J269 797 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 PYGLP06737 847 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 PDE1BQ01064 536 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 TUBB3Q13509 450 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 ACAD11Q709F0 780 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 SLC25A41Q8N5S1 370 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 THTPAQ9BU02 230 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 TBC1D22BQ9NU19 505 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 NDE1Q9NXR1 346 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 TELO2Q9Y4R8 837 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 SNNO75324 88 aaPredicted RBP16.03■□□□□ 0.16
SDF4-207ENST00000494748 CCNFP41002 786 aa16.03■□□□□ 0.16
SDF4-207ENST00000494748 MAP3K10Q02779 954 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms