RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 CASP7P55210 303 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 SEC13P55735 322 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 KCNQ4P56696 695 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 POLR2FP61218 127 aaKnown RBP2.85□□□□□ -1.95
MDC1-208ENST00000494654 NOP14P78316 857 aaKnown RBP2.85□□□□□ -1.95
MDC1-208ENST00000494654 COG7P83436 770 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 PPARDQ03181 441 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 BTKQ06187 659 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 PPATQ06203 517 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 KLHL30Q0D2K2 578 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 SF3A3Q12874 501 aaKnown RBP eCLIP2.85□□□□□ -1.95
MDC1-208ENST00000494654 DNAJC3Q13217 504 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 ORC2Q13416 577 aaPredicted RBP2.85□□□□□ -1.95
MDC1-208ENST00000494654 TCIRG1Q13488 830 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 PTK6Q13882 451 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 GCKRQ14397 625 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 WTAPQ15007 396 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 TMED2Q15363 201 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 UBE3CQ15386 1083 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 SF3B3Q15393 1217 aaKnown RBP2.85□□□□□ -1.95
MDC1-208ENST00000494654 TGFBIQ15582 683 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 NPY5RQ15761 445 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 HLFQ16534 295 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 OCLNQ16625 522 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 ANKDD1AQ495B1 522 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 SFT2D3Q587I9 215 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 AKAP4Q5JQC9 854 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 EFHC1Q5JVL4 640 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 FAM83BQ5T0W9 1011 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 UBAP2Q5T6F2 1119 aaKnown RBP2.85□□□□□ -1.95
MDC1-208ENST00000494654 ANKRD40Q6AI12 368 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 SNRNP48Q6IEG0 339 aaKnown RBP2.85□□□□□ -1.95
MDC1-208ENST00000494654 KIAA1841Q6NSI8 718 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 ELMSAN1Q6PJG2 1045 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 MPRIPQ6WCQ1 1025 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 TPTE2Q6XPS3 522 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 SYDE1Q6ZW31 735 aaPredicted RBP2.85□□□□□ -1.95
MDC1-208ENST00000494654 ANO5Q75V66 913 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 EPM2AIP1Q7L775 607 aaPredicted RBP2.85□□□□□ -1.95
MDC1-208ENST00000494654 OTOAQ7RTW8 1153 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 TMC7Q7Z402 723 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 HAUS6Q7Z4H7 955 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 CATIPQ7Z7H3 387 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 TRABD2AQ86V40 505 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 VPS36Q86VN1 386 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 RASSF3Q86WH2 238 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 CHSY1Q86X52 802 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 PALB2Q86YC2 1186 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 MCF2L2Q86YR7 1114 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 TMPRSS6Q8IU80 811 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 ULK2Q8IYT8 1036 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 ZNF654Q8IZM8 581 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 TTC5Q8N0Z6 440 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 VPS52Q8N1B4 723 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 CENPSQ8N2Z9 138 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 ESX1Q8N693 406 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 ANKRD13CQ8N6S4 541 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 ATP6V0D2Q8N8Y2 350 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 SPERTQ8NA61 448 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 ICA1LQ8NDH6 482 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 DDHD1Q8NEL9 900 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 DTX3LQ8TDB6 740 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 MORC4Q8TE76 937 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 DENND1AQ8TEH3 1009 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 U2AF1L4Q8WU68 220 aaKnown RBP2.85□□□□□ -1.95
MDC1-208ENST00000494654 GIMAP1Q8WWP7 306 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 USP6NLQ92738 828 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 PBXIP1Q96AQ6 731 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 SHISA4Q96DD7 197 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 DCUN1D1Q96GG9 259 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 ABHD17AQ96GS6 310 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 SNF8Q96H20 258 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 NSL1Q96IY1 281 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 CEP63Q96MT8 703 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 C7orf26Q96N11 449 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 ZNF641Q96N77 438 aaPredicted RBP2.85□□□□□ -1.95
MDC1-208ENST00000494654 ZIC5Q96T25 663 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 C7orf25Q9BPX7 421 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 NEURL2Q9BR09 285 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 GPATCH1Q9BRR8 931 aaKnown RBP2.85□□□□□ -1.95
MDC1-208ENST00000494654 SLC39A3Q9BRY0 314 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 MKNK1Q9BUB5 465 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 METTL22Q9BUU2 404 aaPredicted RBP2.85□□□□□ -1.95
MDC1-208ENST00000494654 COL25A1Q9BXS0 654 aaPredicted RBP2.85□□□□□ -1.95
MDC1-208ENST00000494654 MRPL1Q9BYD6 325 aaKnown RBP2.85□□□□□ -1.95
MDC1-208ENST00000494654 ZNF341Q9BYN7 854 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 SLC2A11Q9BYW1 496 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 FOXP3Q9BZS1 431 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 TRIM31Q9BZY9 425 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 TRIM9Q9C026 710 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.85□□□□□ -1.953e-7■■□□□ 11.7
MDC1-208ENST00000494654 SAP130Q9H0E3 1048 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 IRF2BPLQ9H1B7 796 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 C1orf21Q9H246 121 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 SEMA4AQ9H3S1 761 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 TUT1Q9H6E5 874 aaKnown RBP2.85□□□□□ -1.95
MDC1-208ENST00000494654 MMRN2Q9H8L6 949 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 PSTPIP2Q9H939 334 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 C12orf10Q9HB07 376 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 EPB41L4AQ9HCS5 686 aaPredicted RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms