RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 SMG7Q92540 1137 aaKnown RBP5.35□□□□□ -1.55
SMC4-224ENST00000494612 NACC2Q96BF6 587 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 IQCDQ96DY2 449 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 PDLIM2Q96JY6 352 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 BRIP1Q9BX63 1249 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 STARD7Q9NQZ5 370 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 MID2Q9UJV3 735 aa5.35□□□□□ -1.55
SMC4-224ENST00000494612 IL1R1P14778 569 aa5.34□□□□□ -1.55
SMC4-224ENST00000494612 TRIM14Q14142 442 aa5.34□□□□□ -1.55
SMC4-224ENST00000494612 IZUMO3Q5VZ72 239 aa5.34□□□□□ -1.55
SMC4-224ENST00000494612 CLNKQ7Z7G1 428 aa5.34□□□□□ -1.55
SMC4-224ENST00000494612 SRRM1Q8IYB3 904 aaKnown RBP5.34□□□□□ -1.55
SMC4-224ENST00000494612 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.34□□□□□ -1.55
SMC4-224ENST00000494612 DEPTORQ8TB45 409 aa5.34□□□□□ -1.55
SMC4-224ENST00000494612 POC1BQ8TC44 478 aa5.34□□□□□ -1.55
SMC4-224ENST00000494612 POF1BQ8WVV4 589 aa5.34□□□□□ -1.55
SMC4-224ENST00000494612 SPSB4Q96A44 273 aa5.34□□□□□ -1.55
SMC4-224ENST00000494612 MSLNLQ96KJ4 702 aa5.34□□□□□ -1.55
SMC4-224ENST00000494612 PTPRHQ9HD43 1115 aa5.34□□□□□ -1.55
SMC4-224ENST00000494612 ZSCAN32Q9NX65 697 aa5.34□□□□□ -1.55
SMC4-224ENST00000494612 RNF7Q9UBF6 113 aa5.34□□□□□ -1.55
SMC4-224ENST00000494612 ZNF212Q9UDV6 495 aa5.34□□□□□ -1.55
SMC4-224ENST00000494612 ABHD14A-ACY1A0A1B0GW23 586 aa5.33□□□□□ -1.56
SMC4-224ENST00000494612 LRRC3CA6NJW4 275 aa5.33□□□□□ -1.56
SMC4-224ENST00000494612 FOXN3O00409 490 aaPredicted RBP5.33□□□□□ -1.56
SMC4-224ENST00000494612 ANXA2P07355 339 aaKnown RBP5.33□□□□□ -1.56
SMC4-224ENST00000494612 MYL4P12829 197 aa5.33□□□□□ -1.56
SMC4-224ENST00000494612 ITGALP20701 1170 aa5.33□□□□□ -1.56
SMC4-224ENST00000494612 FGFR2P21802 821 aa5.33□□□□□ -1.56
SMC4-224ENST00000494612 TRAPPC10P48553 1259 aa5.33□□□□□ -1.56
SMC4-224ENST00000494612 PXNP49023 591 aaPredicted RBP5.33□□□□□ -1.56
SMC4-224ENST00000494612 CACNA2D1P54289 1103 aa5.33□□□□□ -1.56
SMC4-224ENST00000494612 SLC29A2Q14542 456 aa5.33□□□□□ -1.56
SMC4-224ENST00000494612 CYP2A13Q16696 494 aa5.33□□□□□ -1.56
SMC4-224ENST00000494612 ZIK1Q3SY52 487 aaPredicted RBP5.33□□□□□ -1.56
SMC4-224ENST00000494612 CACHD1Q5VU97 1274 aa5.33□□□□□ -1.56
SMC4-224ENST00000494612 ADGRG5Q8IZF4 528 aa5.33□□□□□ -1.56
SMC4-224ENST00000494612 MORC4Q8TE76 937 aa5.33□□□□□ -1.56
SMC4-224ENST00000494612 PPP2R3CQ969Q6 453 aa5.33□□□□□ -1.56
SMC4-224ENST00000494612 ZNF566Q969W8 418 aa5.33□□□□□ -1.56
SMC4-224ENST00000494612 MED15Q96RN5 788 aa5.33□□□□□ -1.56
SMC4-224ENST00000494612 HEPHQ9BQS7 1158 aa5.33□□□□□ -1.56
SMC4-224ENST00000494612 CRB3Q9BUF7 120 aa5.33□□□□□ -1.56
SMC4-224ENST00000494612 CHMP4AQ9BY43 222 aa5.33□□□□□ -1.56
SMC4-224ENST00000494612 GALNT9Q9HCQ5 603 aa5.33□□□□□ -1.56
SMC4-224ENST00000494612 ARFGAP3Q9NP61 516 aa5.33□□□□□ -1.56
SMC4-224ENST00000494612 MAN2B2Q9Y2E5 1009 aa5.33□□□□□ -1.56
SMC4-224ENST00000494612 PRAMEF33A0A0G2JMD5 474 aa5.32□□□□□ -1.56
SMC4-224ENST00000494612 MBD3L4A6NDZ8 208 aaPredicted RBP5.32□□□□□ -1.56
SMC4-224ENST00000494612 MBD3L3A6NE82 208 aaPredicted RBP5.32□□□□□ -1.56
SMC4-224ENST00000494612 THAP12O43422 761 aa5.32□□□□□ -1.56
SMC4-224ENST00000494612 PRAMEF10O60809 474 aa5.32□□□□□ -1.56
SMC4-224ENST00000494612 FGF18O76093 207 aa5.32□□□□□ -1.56
SMC4-224ENST00000494612 RASAL1O95294 804 aa5.32□□□□□ -1.56
SMC4-224ENST00000494612 NDST3O95803 873 aa5.32□□□□□ -1.56
SMC4-224ENST00000494612 TXNP10599 105 aaKnown RBP5.32□□□□□ -1.56
SMC4-224ENST00000494612 BTF3P20290 206 aaKnown RBP5.32□□□□□ -1.56
SMC4-224ENST00000494612 GATA3P23771 443 aa5.32□□□□□ -1.56
SMC4-224ENST00000494612 YY1P25490 414 aa5.32□□□□□ -1.56
SMC4-224ENST00000494612 KLRC1P26715 233 aa5.32□□□□□ -1.56
SMC4-224ENST00000494612 PPM1AP35813 382 aa5.32□□□□□ -1.56
SMC4-224ENST00000494612 NPTX2P47972 431 aa5.32□□□□□ -1.56
SMC4-224ENST00000494612 NDUFV1P49821 464 aa5.32□□□□□ -1.56
SMC4-224ENST00000494612 ANXA11P50995 505 aaKnown RBP5.32□□□□□ -1.56
SMC4-224ENST00000494612 TCF15Q12870 199 aa5.32□□□□□ -1.56
SMC4-224ENST00000494612 DYRK1AQ13627 763 aa5.32□□□□□ -1.56
SMC4-224ENST00000494612 KCNAB1Q14722 419 aa5.32□□□□□ -1.56
SMC4-224ENST00000494612 PTCHD3Q3KNS1 767 aa5.32□□□□□ -1.56
SMC4-224ENST00000494612 LCE1AQ5T7P2 110 aa5.32□□□□□ -1.56
SMC4-224ENST00000494612 ARHGAP40Q5TG30 622 aa5.32□□□□□ -1.56
SMC4-224ENST00000494612 VPS53Q5VIR6 699 aa5.32□□□□□ -1.56
SMC4-224ENST00000494612 TSHZ1Q6ZSZ6 1077 aa5.32□□□□□ -1.56
SMC4-224ENST00000494612 SCARB1Q8WTV0 552 aa5.32□□□□□ -1.56
SMC4-224ENST00000494612 SNX19Q92543 992 aa5.32□□□□□ -1.56
SMC4-224ENST00000494612 PPCSQ9HAB8 311 aa5.32□□□□□ -1.56
SMC4-224ENST00000494612 KCNE5Q9UJ90 142 aa5.32□□□□□ -1.56
SMC4-224ENST00000494612 LRCH1Q9Y2L9 728 aa5.32□□□□□ -1.56
SMC4-224ENST00000494612 RGS10O43665 173 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 PROP1O75360 226 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 PDHA1P08559 390 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 ATXN1LP0C7T5 689 aaKnown RBP5.31□□□□□ -1.56
SMC4-224ENST00000494612 IL1R2P27930 398 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 IL6STP40189 918 aaPredicted RBP5.31□□□□□ -1.56
SMC4-224ENST00000494612 VIPR2P41587 438 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 PTDSS1P48651 473 aaKnown RBP5.31□□□□□ -1.56
SMC4-224ENST00000494612 HSPA7P48741 367 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 PRKAG1P54619 331 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 RPS7P62081 194 aaKnown RBP5.31□□□□□ -1.56
SMC4-224ENST00000494612 SP2Q02086 613 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 GRM1Q13255 1194 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 SLC35G1Q2M3R5 365 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 RBM20Q5T481 1227 aaKnown RBP5.31□□□□□ -1.56
SMC4-224ENST00000494612 CCDC174Q6PII3 467 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 YAF2Q8IY57 180 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 EXOC8Q8IYI6 725 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 SYTL1Q8IYJ3 562 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 FAM9AQ8IZU1 332 aaPredicted RBP5.31□□□□□ -1.56
SMC4-224ENST00000494612 SLC30A5Q8TAD4 765 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 ZNF384Q8TF68 577 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 TMEM171Q8WVE6 324 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms