RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 SMOQ99835 787 aa13.21□□□□□ -0.3
TRA2A-209ENST00000494255 LRRC3Q9BY71 257 aa13.21□□□□□ -0.3
TRA2A-209ENST00000494255 DUSP16Q9BY84 665 aa13.21□□□□□ -0.3
TRA2A-209ENST00000494255 ATXN3LQ9H3M9 355 aa13.21□□□□□ -0.3
TRA2A-209ENST00000494255 SLITRK6Q9H5Y7 841 aa13.21□□□□□ -0.3
TRA2A-209ENST00000494255 CSNK1G1Q9HCP0 422 aa13.21□□□□□ -0.3
TRA2A-209ENST00000494255 FAM207AQ9NSI2 230 aaPredicted RBP13.21□□□□□ -0.3
TRA2A-209ENST00000494255 GDE1Q9NZC3 331 aa13.21□□□□□ -0.3
TRA2A-209ENST00000494255 FHOD1Q9Y613 1164 aa13.21□□□□□ -0.3
TRA2A-209ENST00000494255 A0A1W2PRU2 124 aa13.2□□□□□ -0.3
TRA2A-209ENST00000494255 RNF225M0QZC1 329 aaPredicted RBP13.2□□□□□ -0.3
TRA2A-209ENST00000494255 LAMP2P13473 410 aa13.2□□□□□ -0.3
TRA2A-209ENST00000494255 NPR3P17342 541 aa13.2□□□□□ -0.3
TRA2A-209ENST00000494255 CCR2P41597 374 aa13.2□□□□□ -0.3
TRA2A-209ENST00000494255 ZNF132P52740 706 aa13.2□□□□□ -0.3
TRA2A-209ENST00000494255 BCAT1P54687 386 aa13.2□□□□□ -0.3
TRA2A-209ENST00000494255 IFRD2Q12894 506 aaPredicted RBP13.2□□□□□ -0.3
TRA2A-209ENST00000494255 TEAD2Q15562 447 aa13.2□□□□□ -0.3
TRA2A-209ENST00000494255 GAREM2Q75VX8 874 aa13.2□□□□□ -0.3
TRA2A-209ENST00000494255 NPAS3Q8IXF0 933 aa13.2□□□□□ -0.3
TRA2A-209ENST00000494255 NUP93Q8N1F7 819 aa13.2□□□□□ -0.3
TRA2A-209ENST00000494255 ANKRD52Q8NB46 1076 aa13.2□□□□□ -0.3
TRA2A-209ENST00000494255 NEK11Q8NG66 645 aa13.2□□□□□ -0.3
TRA2A-209ENST00000494255 SHKBP1Q8TBC3 707 aa13.2□□□□□ -0.3
TRA2A-209ENST00000494255 MCRS1Q96EZ8 462 aa13.2□□□□□ -0.3
TRA2A-209ENST00000494255 MYRFLQ96LU7 910 aa13.2□□□□□ -0.3
TRA2A-209ENST00000494255 RTN4Q9NQC3 1192 aaKnown RBP13.2□□□□□ -0.3
TRA2A-209ENST00000494255 TMEM30AQ9NV96 361 aa13.2□□□□□ -0.3
TRA2A-209ENST00000494255 EPS15L1Q9UBC2 864 aa13.2□□□□□ -0.3
TRA2A-209ENST00000494255 SIK3Q9Y2K2 1263 aa13.2□□□□□ -0.3
TRA2A-209ENST00000494255 GREB1Q4ZG55 1949 aa13.19□□□□□ -0.3
TRA2A-209ENST00000494255 O00370 1275 aa13.19□□□□□ -0.3
TRA2A-209ENST00000494255 MED7O43513 233 aa13.19□□□□□ -0.3
TRA2A-209ENST00000494255 BEST1O76090 585 aa13.19□□□□□ -0.3
TRA2A-209ENST00000494255 GJA1P17302 382 aa13.19□□□□□ -0.3
TRA2A-209ENST00000494255 BRD2P25440 801 aaKnown RBP13.19□□□□□ -0.3
TRA2A-209ENST00000494255 KLK7P49862 253 aa13.19□□□□□ -0.3
TRA2A-209ENST00000494255 POLR2FP61218 127 aaKnown RBP13.19□□□□□ -0.3
TRA2A-209ENST00000494255 FANCCQ00597 558 aa13.19□□□□□ -0.3
TRA2A-209ENST00000494255 DRAP1Q14919 205 aaPredicted RBP13.19□□□□□ -0.3
TRA2A-209ENST00000494255 DPY19L2P1Q6NXN4 242 aa13.19□□□□□ -0.3
TRA2A-209ENST00000494255 CLEC20AQ6ZU45 233 aa13.19□□□□□ -0.3
TRA2A-209ENST00000494255 ZMIZ2Q8NF64 920 aa13.19□□□□□ -0.3
TRA2A-209ENST00000494255 MRPS31Q92665 395 aaKnown RBP13.19□□□□□ -0.3
TRA2A-209ENST00000494255 SLITRK1Q96PX8 696 aa13.19□□□□□ -0.3
TRA2A-209ENST00000494255 TTLL2Q9BWV7 592 aa13.19□□□□□ -0.3
TRA2A-209ENST00000494255 GPR88Q9GZN0 384 aa13.19□□□□□ -0.3
TRA2A-209ENST00000494255 GANQ9H2C0 597 aa13.19□□□□□ -0.3
TRA2A-209ENST00000494255 IL21Q9HBE4 155 aa13.19□□□□□ -0.3
TRA2A-209ENST00000494255 PNPLA8Q9NP80 782 aa13.19□□□□□ -0.3
TRA2A-209ENST00000494255 COMMD8Q9NX08 183 aa13.19□□□□□ -0.3
TRA2A-209ENST00000494255 AJAP1Q9UKB5 411 aaPredicted RBP13.19□□□□□ -0.3
TRA2A-209ENST00000494255 TSPAN16Q9UKR8 245 aa13.19□□□□□ -0.3
TRA2A-209ENST00000494255 DOCK8Q8NF50 2099 aa13.19□□□□□ -0.3
TRA2A-209ENST00000494255 A0A1B0GTH6 734 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 THAP12O43422 761 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 F11P03951 625 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 YWHAQP27348 245 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 GNA15P30679 374 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 SLC5A3P53794 718 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 UBASH3AP57075 661 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 BPIFB4P59827 614 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 PTK2Q05397 1052 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 BST2Q10589 180 aaKnown RBP13.18□□□□□ -0.3
TRA2A-209ENST00000494255 CNGA2Q16280 664 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 LCLAT1Q6UWP7 414 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 RNF214Q8ND24 703 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 TFAP2BQ92481 460 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 FBXO32Q969P5 355 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 SPAG5Q96R06 1193 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 STK33Q9BYT3 514 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 FBXO44Q9H4M3 255 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 TRPM5Q9NZQ8 1165 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 LIMD1Q9UGP4 676 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 ZMYM5Q9UJ78 669 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRA2A-209ENST00000494255 PATJQ8NI35 1801 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 M0QYV0 167 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 FOXN3O00409 490 aaPredicted RBP13.18□□□□□ -0.3
TRA2A-209ENST00000494255 TNFRSF10BO14763 440 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 CYP26A1O43174 497 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 TEX33O43247 280 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 MOSPD3O75425 235 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 CALCAP01258 141 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 SETSIPP0DME0 302 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 DDX6P26196 483 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRA2A-209ENST00000494255 PPP3CCP48454 512 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 USP46P62068 366 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 CYP4F8P98187 520 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 GPR158Q5T848 1215 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 MTSS1LQ765P7 747 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 TTC30AQ86WT1 665 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 FAM71AQ8IYT1 594 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 PDZD8Q8NEN9 1154 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 NAP1L5Q96NT1 182 aaPredicted RBP13.18□□□□□ -0.3
TRA2A-209ENST00000494255 ANP32EQ9BTT0 268 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 NAA15Q9BXJ9 866 aaKnown RBP13.18□□□□□ -0.3
TRA2A-209ENST00000494255 UBXN6Q9BZV1 441 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 NLRC4Q9NPP4 1024 aa13.18□□□□□ -0.3
TRA2A-209ENST00000494255 ZNF638Q14966 1978 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms