RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 EEF2KMTQ96G04 330 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 TRMT2BQ96GJ1 504 aaKnown RBP9.11□□□□□ -0.95
LRCH3-219ENST00000494069 FUBP3Q96I24 572 aaKnown RBP eCLIP9.11□□□□□ -0.95
LRCH3-219ENST00000494069 FAM83CQ9BQN1 747 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 EBF3Q9H4W6 596 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 PRMT8Q9NR22 394 aaPredicted RBP9.11□□□□□ -0.95
LRCH3-219ENST00000494069 TDP1Q9NUW8 608 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 GCNT4Q9P109 453 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 FBXO4Q9UKT5 387 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 FRYLO94915 3013 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 NUP210Q8TEM1 1887 aaPredicted RBP9.11□□□□□ -0.95
LRCH3-219ENST00000494069 GPR179Q6PRD1 2367 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 PATJQ8NI35 1801 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 DENND4CQ5VZ89 1909 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 AKAP3O75969 853 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 LMNAP02545 664 aaKnown RBP9.1□□□□□ -0.95
LRCH3-219ENST00000494069 TRIM49P0CI25 452 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 TRIM49CP0CI26 452 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 ATICP31939 592 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 MAGEA9P43362 315 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 ZNF699Q32M78 642 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 ITPRIPL2Q3MIP1 535 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 ZACNQ401N2 412 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 PKN3Q6P5Z2 889 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 VSTM1Q6UX27 236 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 PAQR9Q6ZVX9 377 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 RALGPS2Q86X27 583 aaPredicted RBP9.1□□□□□ -0.95
LRCH3-219ENST00000494069 SUMF1Q8NBK3 374 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 B3GALNT2Q8NCR0 500 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 TMEM174Q8WUU8 243 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 NELL1Q92832 810 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 SYAP1Q96A49 352 aaPredicted RBP9.1□□□□□ -0.95
LRCH3-219ENST00000494069 SPATA17Q96L03 361 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 KCNK16Q96T55 309 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 SCAND2PQ9GZW5 306 aaPredicted RBP9.1□□□□□ -0.95
LRCH3-219ENST00000494069 RNF38Q9H0F5 515 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 LINC00597Q9H2U6 94 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 C8orf33Q9H7E9 229 aaPredicted RBP9.1□□□□□ -0.95
LRCH3-219ENST00000494069 VRTNQ9H8Y1 702 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 FBRSL1Q9HCM7 1045 aaKnown RBP9.1□□□□□ -0.95
LRCH3-219ENST00000494069 POLR3BQ9NW08 1133 aaPredicted RBP9.1□□□□□ -0.95
LRCH3-219ENST00000494069 THG1LQ9NWX6 298 aaKnown RBP9.1□□□□□ -0.95
LRCH3-219ENST00000494069 HMGXB4Q9UGU5 601 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 TRAF3IP3Q9Y228 551 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 WNT6Q9Y6F9 365 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 OBSL1O75147 1896 aa9.1□□□□□ -0.95
LRCH3-219ENST00000494069 KIF26AQ9ULI4 1882 aaPredicted RBP9.09□□□□□ -0.95
LRCH3-219ENST00000494069 EP300Q09472 2414 aaPredicted RBP9.09□□□□□ -0.95
LRCH3-219ENST00000494069 TRAV19A0A0A6YYK7 116 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 ZNF840PA6NDX5 716 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 SCAMP3O14828 347 aaKnown RBP9.09□□□□□ -0.95
LRCH3-219ENST00000494069 CALUO43852 315 aaPredicted RBP9.09□□□□□ -0.95
LRCH3-219ENST00000494069 CLSTN1O94985 981 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 MYL1P05976 194 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 CKMP06732 381 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 FAM163BP0C2L3 166 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 HDCP19113 662 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 NR2F2P24468 414 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 DDX6P26196 483 aaKnown RBP eCLIP9.09□□□□□ -0.95
LRCH3-219ENST00000494069 VAMP7P51809 220 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 MLLT6P55198 1093 aaPredicted RBP9.09□□□□□ -0.95
LRCH3-219ENST00000494069 FAM160A1Q05DH4 1040 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 PPP3CAQ08209 521 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 IFRD2Q12894 506 aaPredicted RBP9.09□□□□□ -0.95
LRCH3-219ENST00000494069 TAF10Q12962 218 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 PNOCQ13519 176 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 RUNX3Q13761 415 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 MTF1Q14872 753 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 MAPRE1Q15691 268 aaKnown RBP9.09□□□□□ -0.95
LRCH3-219ENST00000494069 ZNF77Q15935 545 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 ZNF528Q3MIS6 628 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 ZNF667Q5HYK9 610 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 ACOT1Q86TX2 421 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 FMR1NBQ8N0W7 255 aaPredicted RBP9.09□□□□□ -0.95
LRCH3-219ENST00000494069 ZBTB44Q8NCP5 570 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 SH3RF2Q8TEC5 729 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 MMRN2Q9H8L6 949 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 APOBEC3GQ9HC16 384 aaKnown RBP9.09□□□□□ -0.95
LRCH3-219ENST00000494069 ZSCAN32Q9NX65 697 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 UXTQ9UBK9 157 aaPredicted RBP9.09□□□□□ -0.95
LRCH3-219ENST00000494069 ATP6V1DQ9Y5K8 247 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 GREB1Q4ZG55 1949 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 FANCMQ8IYD8 2048 aa9.09□□□□□ -0.95
LRCH3-219ENST00000494069 PTPRDP23468 1912 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 ANAPC1Q9H1A4 1944 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 GVINP1Q7Z2Y8 2422 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 ANTXRLA6NF34 631 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 SOBPA7XYQ1 873 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 CHURC1-FNTBB4DL54 471 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 K7ESF4 209 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 TRIM66O15016 1216 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 KINO60870 393 aaKnown RBP9.08□□□□□ -0.96
LRCH3-219ENST00000494069 LILRB5O75023 590 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 BEST1O76090 585 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 ABL1P00519 1130 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 EGFP01133 1207 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 HLA-DRAP01903 254 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 USP17L7P0C7H9 530 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 CCDC130P13994 396 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 ANXA13P27216 316 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms