RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 NR1H3Q13133 447 aa14.29□□□□□ -0.12
CTDSP1-212ENST00000494067 PSMD2Q13200 908 aa14.29□□□□□ -0.12
CTDSP1-212ENST00000494067 PKN3Q6P5Z2 889 aa14.29□□□□□ -0.12
CTDSP1-212ENST00000494067 PRR23BQ6ZRT6 265 aa14.29□□□□□ -0.12
CTDSP1-212ENST00000494067 CPA6Q8N4T0 437 aa14.29□□□□□ -0.12
CTDSP1-212ENST00000494067 MYCBPAPQ8TBZ2 947 aa14.29□□□□□ -0.12
CTDSP1-212ENST00000494067 PARD3BQ8TEW8 1205 aa14.29□□□□□ -0.12
CTDSP1-212ENST00000494067 SYAP1Q96A49 352 aaPredicted RBP14.29□□□□□ -0.12
CTDSP1-212ENST00000494067 SPATA17Q96L03 361 aa14.29□□□□□ -0.12
CTDSP1-212ENST00000494067 SPATA32Q96LK8 384 aa14.29□□□□□ -0.12
CTDSP1-212ENST00000494067 EBF3Q9H4W6 596 aa14.29□□□□□ -0.12
CTDSP1-212ENST00000494067 SMYD3Q9H7B4 428 aa14.29□□□□□ -0.12
CTDSP1-212ENST00000494067 GCNT4Q9P109 453 aa14.29□□□□□ -0.12
CTDSP1-212ENST00000494067 USP25Q9UHP3 1055 aa14.29□□□□□ -0.12
CTDSP1-212ENST00000494067 CLDN5O00501 218 aa14.28□□□□□ -0.12
CTDSP1-212ENST00000494067 TACC1O75410 805 aa14.28□□□□□ -0.12
CTDSP1-212ENST00000494067 KIF20AO95235 890 aa14.28□□□□□ -0.12
CTDSP1-212ENST00000494067 MYL1P05976 194 aa14.28□□□□□ -0.12
CTDSP1-212ENST00000494067 PFKLP17858 780 aa14.28□□□□□ -0.12
CTDSP1-212ENST00000494067 HDCP19113 662 aa14.28□□□□□ -0.12
CTDSP1-212ENST00000494067 TRIM21P19474 475 aaKnown RBP14.28□□□□□ -0.12
CTDSP1-212ENST00000494067 PPP3CCP48454 512 aa14.28□□□□□ -0.12
CTDSP1-212ENST00000494067 BIRC3Q13489 604 aa14.28□□□□□ -0.12
CTDSP1-212ENST00000494067 PUM1Q14671 1186 aaKnown RBP eCLIP14.28□□□□□ -0.12
CTDSP1-212ENST00000494067 MTF1Q14872 753 aa14.28□□□□□ -0.12
CTDSP1-212ENST00000494067 MDH1BQ5I0G3 518 aa14.28□□□□□ -0.12
CTDSP1-212ENST00000494067 DENND5BQ6ZUT9 1274 aa14.28□□□□□ -0.12
CTDSP1-212ENST00000494067 GVINP1Q7Z2Y8 2422 aa14.28□□□□□ -0.12
CTDSP1-212ENST00000494067 LONP2Q86WA8 852 aa14.28□□□□□ -0.12
CTDSP1-212ENST00000494067 FBRSL1Q9HCM7 1045 aaKnown RBP14.28□□□□□ -0.12
CTDSP1-212ENST00000494067 POLR3BQ9NW08 1133 aaPredicted RBP14.28□□□□□ -0.12
CTDSP1-212ENST00000494067 DUS2Q9NX74 493 aaKnown RBP14.28□□□□□ -0.12
CTDSP1-212ENST00000494067 TRPM5Q9NZQ8 1165 aa14.28□□□□□ -0.12
CTDSP1-212ENST00000494067 NXF1Q9UBU9 619 aaKnown RBP14.28□□□□□ -0.12
CTDSP1-212ENST00000494067 ATP8B3O60423 1300 aa14.27□□□□□ -0.12
CTDSP1-212ENST00000494067 ANTXRLA6NF34 631 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 A8MXQ7 604 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 K7ESF4 209 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 PAPSS2O95340 614 aaPredicted RBP14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 STAU1O95793 577 aaKnown RBP14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 RPN1P04843 607 aaKnown RBP14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 P4HA1P13674 534 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 KRT85P78386 507 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 DPYDQ12882 1025 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 USP4Q13107 963 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 CCINQ13939 588 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 SIM2Q14190 667 aaPredicted RBP14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 ZNF77Q15935 545 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 FBXO43Q4G163 708 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 LAIR1Q6GTX8 287 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 PAQR9Q6ZVX9 377 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 DGLUCYQ7Z3D6 616 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 ARL14EPQ8N8R7 260 aaPredicted RBP14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 CCDC26Q8TAB7 109 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 OSCP1Q8WVF1 389 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 EZH1Q92800 747 aaPredicted RBP14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 ATP2A3Q93084 1043 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 B3GNT5Q9BYG0 378 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 ZNF518BQ9C0D4 1074 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 ELOVL4Q9GZR5 314 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 HMGXB4Q9UGU5 601 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 USP18Q9UMW8 372 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 SLC8A2Q9UPR5 921 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 ATP6V1DQ9Y5K8 247 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 FAM186AA6NE01 2351 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 OTOGLQ3ZCN5 2332 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 EML5Q05BV3 1969 aa14.27□□□□□ -0.13
CTDSP1-212ENST00000494067 PRR5-ARHGAP8B1AHC4 643 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 CHURC1-FNTBB4DL54 471 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 F8VP50 259 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 TRDMT1O14717 391 aaKnown RBP14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 ABL1P00519 1130 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 NR3C1P04150 777 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 PTPN1P18031 435 aaKnown RBP14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 DRD1P21728 446 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 SYKP43405 635 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 FNTBP49356 437 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 ARHGAP8P85298 464 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 LMNB2Q03252 620 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 ORC1Q13415 861 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 ZNF667Q5HYK9 610 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 TMEM196Q5HYL7 178 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 HEATR6Q6AI08 1181 aaKnown RBP14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 SPOPLQ6IQ16 392 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 FSTL4Q6MZW2 842 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 SCARA5Q6ZMJ2 495 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 CEP68Q76N32 757 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 SLC9A9Q8IVB4 645 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 TMEM174Q8WUU8 243 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 RMDN1Q96DB5 314 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 CCDC34Q96HJ3 373 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 TNIP3Q96KP6 325 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 C8orf48Q96LL4 319 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 SLITRK1Q96PX8 696 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 P2RY13Q9BPV8 354 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 TTLL2Q9BWV7 592 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 VRTNQ9H8Y1 702 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 MAPK8IP1Q9UQF2 711 aa14.26□□□□□ -0.13
CTDSP1-212ENST00000494067 FRMD4BQ9Y2L6 1034 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms