RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 RPL34P49207 117 aaKnown RBP11.19□□□□□ -0.62
CLCN6-208ENST00000494028 VCPP55072 806 aaKnown RBP11.19□□□□□ -0.62
CLCN6-208ENST00000494028 DSC3Q14574 896 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 ACAP1Q15027 740 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 OASLQ15646 514 aaKnown RBP11.19□□□□□ -0.62
CLCN6-208ENST00000494028 HADHQ16836 314 aaKnown RBP11.19□□□□□ -0.62
CLCN6-208ENST00000494028 CCDC142Q17RM4 750 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 GLIPR1L2Q4G1C9 344 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 RAB6CQ53S08 254 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 CEP85LQ5SZL2 805 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 ZFYVE27Q5T4F4 411 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 PMF1Q6P1K2 205 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 DRICH1Q6PGQ1 229 aaPredicted RBP11.19□□□□□ -0.62
CLCN6-208ENST00000494028 BBS12Q6ZW61 710 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 CRYBG2Q8N1P7 616 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 SH2D3CQ8N5H7 860 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 GSTCDQ8NEC7 633 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 STK32AQ8WU08 396 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 SLC35F5Q8WV83 523 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 RXFP2Q8WXD0 754 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 NKD2Q969F2 451 aaPredicted RBP11.19□□□□□ -0.62
CLCN6-208ENST00000494028 HAUS1Q96CS2 278 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 SNF8Q96H20 258 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 CNPY3Q9BT09 278 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 RAB6CQ9H0N0 254 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 SNX25Q9H3E2 840 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 AGO3Q9H9G7 860 aaKnown RBP11.19□□□□□ -0.62
CLCN6-208ENST00000494028 TMBIM4Q9HC24 238 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 CHST12Q9NRB3 414 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 AAASQ9NRG9 546 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 RNF186Q9NXI6 227 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 CACNG4Q9UBN1 327 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 ATP8A1Q9Y2Q0 1164 aa11.19□□□□□ -0.62
CLCN6-208ENST00000494028 TJP3O95049 919 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 TRUB2O95900 331 aaKnown RBP11.18□□□□□ -0.62
CLCN6-208ENST00000494028 CD48P09326 243 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 GHRP10912 638 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 CD52P31358 61 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 CHKAP35790 457 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 LMAN1P49257 510 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 ARSEP51690 589 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 PMS2P54278 862 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 SP3Q02447 781 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 CALCOCO2Q13137 446 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 TAF5Q15542 800 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 KCNA10Q16322 511 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 C15orf59Q2T9L4 293 aaPredicted RBP11.18□□□□□ -0.62
CLCN6-208ENST00000494028 AGMOQ6ZNB7 445 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 TMEM110Q86TL2 294 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 HACE1Q8IYU2 909 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 ALLCQ8N6M5 410 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 APPL2Q8NEU8 664 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 SLC35B2Q8TB61 432 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 CD99L2Q8TCZ2 262 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 KHSRPQ92945 711 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLCN6-208ENST00000494028 LPPQ93052 612 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 ATP6V1G3Q96LB4 118 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 GAD1Q99259 594 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 LRRC4CQ9HCJ2 640 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 CYLDQ9NQC7 956 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 SLC38A7Q9NVC3 462 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 ASNSD1Q9NWL6 643 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 SRRDQ9UH36 339 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 DDX20Q9UHI6 824 aaKnown RBP11.18□□□□□ -0.62
CLCN6-208ENST00000494028 DNPEPQ9ULA0 475 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 EFR3BQ9Y2G0 817 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 CEP350Q5VT06 3117 aa11.18□□□□□ -0.62
CLCN6-208ENST00000494028 PLXNA3P51805 1871 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 HMGB1P1B2RPK0 211 aaPredicted RBP11.17□□□□□ -0.62
CLCN6-208ENST00000494028 SHOX2O60902 331 aaPredicted RBP11.17□□□□□ -0.62
CLCN6-208ENST00000494028 HUS1O60921 280 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 GRAP2O75791 330 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 RNF8O76064 485 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 KDELR1P24390 212 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 IGFBP6P24592 240 aaPredicted RBP11.17□□□□□ -0.62
CLCN6-208ENST00000494028 LMO2P25791 158 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 THPOP40225 353 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 VPS41P49754 854 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 RAB27AP51159 221 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 SCNN1GP51170 649 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 ITGA8P53708 1063 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 LILRA4P59901 499 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 SKOR1P84550 965 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 SLC6A3Q01959 620 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 PTK7Q13308 1070 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 LPIN1Q14693 890 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 TRIP13Q15645 432 aaPredicted RBP11.17□□□□□ -0.62
CLCN6-208ENST00000494028 PTGISQ16647 500 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 CCDC14Q49A88 953 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 KCNT1Q5JUK3 1230 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 FAM26DQ5JW98 314 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 SH3PXD2AQ5TCZ1 1133 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 AGBL2Q5U5Z8 902 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 IZUMO3Q5VZ72 239 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 KDM7AQ6ZMT4 941 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 SLC26A9Q7LBE3 791 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 MRPL10Q7Z7H8 261 aaKnown RBP11.17□□□□□ -0.62
CLCN6-208ENST00000494028 PRUNE1Q86TP1 453 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 ZDHHC17Q8IUH5 632 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 ANKRD52Q8NB46 1076 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms