RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 NT5DC3Q86UY8 548 aa6.44□□□□□ -1.38
CPSF7-213ENST00000494016 VPS36Q86VN1 386 aa6.44□□□□□ -1.38
CPSF7-213ENST00000494016 RPUSD2Q8IZ73 545 aaKnown RBP6.44□□□□□ -1.38
CPSF7-213ENST00000494016 GPD1LQ8N335 351 aa6.44□□□□□ -1.38
CPSF7-213ENST00000494016 SLC35G2Q8TBE7 412 aa6.44□□□□□ -1.38
CPSF7-213ENST00000494016 CAGE1Q8TC20 777 aa6.44□□□□□ -1.38
CPSF7-213ENST00000494016 TAS1R2Q8TE23 839 aa6.44□□□□□ -1.38
CPSF7-213ENST00000494016 LMBR1Q8WVP7 490 aa6.44□□□□□ -1.38
CPSF7-213ENST00000494016 PSPC1Q8WXF1 523 aaKnown RBP6.44□□□□□ -1.38
CPSF7-213ENST00000494016 POMGNT1Q8WZA1 660 aa6.44□□□□□ -1.38
CPSF7-213ENST00000494016 SHC3Q92529 594 aa6.44□□□□□ -1.38
CPSF7-213ENST00000494016 PMM1Q92871 262 aa6.44□□□□□ -1.38
CPSF7-213ENST00000494016 OPTNQ96CV9 577 aa6.44□□□□□ -1.38
CPSF7-213ENST00000494016 ARHGEF26Q96DR7 871 aa6.44□□□□□ -1.38
CPSF7-213ENST00000494016 PBKQ96KB5 322 aa6.44□□□□□ -1.38
CPSF7-213ENST00000494016 FAM84AQ96KN4 292 aa6.44□□□□□ -1.38
CPSF7-213ENST00000494016 FAM213AQ9BRX8 229 aa6.44□□□□□ -1.38
CPSF7-213ENST00000494016 GOLPH3Q9H4A6 298 aa6.44□□□□□ -1.38
CPSF7-213ENST00000494016 PIF1Q9H611 641 aa6.44□□□□□ -1.38
CPSF7-213ENST00000494016 CCSER2Q9H7U1 834 aa6.44□□□□□ -1.38
CPSF7-213ENST00000494016 TMEM8AQ9HCN3 771 aa6.44□□□□□ -1.38
CPSF7-213ENST00000494016 ZCCHC17Q9NP64 241 aaKnown RBP6.44□□□□□ -1.38
CPSF7-213ENST00000494016 RAB20Q9NX57 234 aa6.44□□□□□ -1.38
CPSF7-213ENST00000494016 NOCTQ9UK39 431 aaKnown RBP6.44□□□□□ -1.38
CPSF7-213ENST00000494016 ADAM30Q9UKF2 790 aa6.44□□□□□ -1.38
CPSF7-213ENST00000494016 PACSIN2Q9UNF0 486 aaPredicted RBP6.44□□□□□ -1.38
CPSF7-213ENST00000494016 COG5Q9UP83 839 aa6.44□□□□□ -1.38
CPSF7-213ENST00000494016 IGKV6-21A0A0C4DH24 114 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 TMCO5BA8MYB1 307 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 H3BQF6 201 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 K7ERI5 159 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 HYAL3O43820 417 aaPredicted RBP6.43□□□□□ -1.38
CPSF7-213ENST00000494016 SH3BP5O60239 455 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 ADCY3O60266 1144 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 BUB1BO60566 1050 aaPredicted RBP6.43□□□□□ -1.38
CPSF7-213ENST00000494016 RTN2O75298 545 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 LRIG2O94898 1065 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 GGPS1O95749 300 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 PGRP06401 933 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 FAM87AP0C7U9 286 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 GZMAP12544 262 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 SCP2P22307 547 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 MCM3P25205 808 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 ABCD1P33897 745 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 MATR3P43243 847 aaKnown RBP eCLIP6.43□□□□□ -1.38
CPSF7-213ENST00000494016 NAMPTP43490 491 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 POLGP54098 1239 aaPredicted RBP6.43□□□□□ -1.38
CPSF7-213ENST00000494016 MFAP3P55082 362 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 HADHBP55084 474 aaKnown RBP6.43□□□□□ -1.38
CPSF7-213ENST00000494016 NLRP11P59045 1033 aaKnown RBP6.43□□□□□ -1.38
CPSF7-213ENST00000494016 RNASE9P60153 205 aaKnown RBP6.43□□□□□ -1.38
CPSF7-213ENST00000494016 RACK1P63244 317 aaKnown RBP6.43□□□□□ -1.38
CPSF7-213ENST00000494016 GPC5P78333 572 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 SLC7A5Q01650 507 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 FMO1Q01740 532 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 DRP2Q13474 957 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 SMC1AQ14683 1233 aaKnown RBP6.43□□□□□ -1.38
CPSF7-213ENST00000494016 CASP8Q14790 479 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 PSMD6Q15008 389 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 CYP27C1Q4G0S4 372 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 GLE1Q53GS7 698 aaKnown RBP6.43□□□□□ -1.38
CPSF7-213ENST00000494016 METTL7BQ6UX53 244 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 ARMCX6Q7L4S7 300 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 FASTKD5Q7L8L6 764 aaKnown RBP6.43□□□□□ -1.38
CPSF7-213ENST00000494016 EEPD1Q7L9B9 569 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 PLPPR4Q7Z2D5 763 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 FMNL3Q8IVF7 1028 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 MRPL41Q8IXM3 137 aaKnown RBP6.43□□□□□ -1.38
CPSF7-213ENST00000494016 NME8Q8N427 588 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 RASGEF1CQ8N431 466 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 METTL13Q8N6R0 699 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 USP38Q8NB14 1042 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 SLC43A3Q8NBI5 491 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 FBXL13Q8NEE6 735 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 ACTRT1Q8TDG2 376 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 PRPF31Q8WWY3 499 aaKnown RBP6.43□□□□□ -1.38
CPSF7-213ENST00000494016 DDX1Q92499 740 aaKnown RBP6.43□□□□□ -1.38
CPSF7-213ENST00000494016 HES6Q96HZ4 224 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 GPR20Q99678 358 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 SPON2Q9BUD6 331 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 DUSP23Q9BVJ7 150 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 TARS2Q9BW92 718 aaKnown RBP6.43□□□□□ -1.38
CPSF7-213ENST00000494016 NT5C1AQ9BXI3 368 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 FOXQ1Q9C009 403 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 KIAA1586Q9HCI6 787 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 ACP6Q9NPH0 428 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 GDF3Q9NR23 364 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 PDGFCQ9NRA1 345 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 RBM12Q9NTZ6 932 aaKnown RBP6.43□□□□□ -1.38
CPSF7-213ENST00000494016 SUCLA2Q9P2R7 463 aaPredicted RBP6.43□□□□□ -1.38
CPSF7-213ENST00000494016 AGO2Q9UKV8 859 aaKnown RBP6.43□□□□□ -1.38
CPSF7-213ENST00000494016 DIS3Q9Y2L1 958 aaKnown RBP6.43□□□□□ -1.38
CPSF7-213ENST00000494016 POLR3KQ9Y2Y1 108 aaPredicted RBP6.43□□□□□ -1.38
CPSF7-213ENST00000494016 PCDHGB7Q9Y5F8 929 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 ADGRA2Q96PE1 1338 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 CNTNAP2Q9UHC6 1331 aa6.43□□□□□ -1.38
CPSF7-213ENST00000494016 A0A0B4J269 797 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 KCNK3O14649 394 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 KIAA0391O15091 583 aaKnown RBP6.42□□□□□ -1.38
CPSF7-213ENST00000494016 TLR3O15455 904 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms