RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 HMGA1P17096 107 aaKnown RBP18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 PTPN2P17706 415 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 CCR2P41597 374 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 STAT1P42224 750 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 PDE4CQ08493 712 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 CBX2Q14781 532 aaPredicted RBP18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 CNGA2Q16280 664 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 TAF12Q16514 161 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 SLC5A9Q2M3M2 681 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 PABPC1LQ4VXU2 614 aaKnown RBP18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 TAF3Q5VWG9 929 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 SCAMP5Q8TAC9 235 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 TCEAL4Q96EI5 215 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 RIPOR3Q96MK2 946 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 HESX1Q9UBX0 185 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 C2orf16Q68DN1 1984 aa18.91■□□□□ 0.62
PDLIM7-208ENST00000493815 LRRC53A6NM62 1247 aa18.91■□□□□ 0.62
PDLIM7-208ENST00000493815 IL9P15248 144 aa18.91■□□□□ 0.62
PDLIM7-208ENST00000493815 CYP11B1P15538 503 aa18.91■□□□□ 0.62
PDLIM7-208ENST00000493815 GJA1P17302 382 aa18.91■□□□□ 0.62
PDLIM7-208ENST00000493815 DENND1BQ6P3S1 775 aa18.91■□□□□ 0.62
PDLIM7-208ENST00000493815 DENND5BQ6ZUT9 1274 aa18.91■□□□□ 0.62
PDLIM7-208ENST00000493815 NOP9Q86U38 636 aaKnown RBP18.91■□□□□ 0.62
PDLIM7-208ENST00000493815 PASD1Q8IV76 773 aa18.91■□□□□ 0.62
PDLIM7-208ENST00000493815 ITFG1Q8TB96 612 aa18.91■□□□□ 0.62
PDLIM7-208ENST00000493815 SPATA17Q96L03 361 aa18.91■□□□□ 0.62
PDLIM7-208ENST00000493815 LRRC3Q9BY71 257 aa18.91■□□□□ 0.62
PDLIM7-208ENST00000493815 WDR6Q9NNW5 1121 aaKnown RBP18.91■□□□□ 0.62
PDLIM7-208ENST00000493815 ASAH2Q9NR71 780 aa18.91■□□□□ 0.62
PDLIM7-208ENST00000493815 DAAM1Q9Y4D1 1078 aa18.91■□□□□ 0.62
PDLIM7-208ENST00000493815 HHLA1C9JL84 531 aa18.9■□□□□ 0.62
PDLIM7-208ENST00000493815 TNFRSF10BO14763 440 aa18.9■□□□□ 0.62
PDLIM7-208ENST00000493815 GYPCP04921 128 aa18.9■□□□□ 0.62
PDLIM7-208ENST00000493815 POU2F2P09086 479 aa18.9■□□□□ 0.62
PDLIM7-208ENST00000493815 MTHFRP42898 656 aa18.9■□□□□ 0.62
PDLIM7-208ENST00000493815 PKDCCQ504Y2 493 aa18.9■□□□□ 0.62
PDLIM7-208ENST00000493815 E4F1Q66K89 784 aaPredicted RBP18.9■□□□□ 0.62
PDLIM7-208ENST00000493815 SPECC1LQ69YQ0 1117 aa18.9■□□□□ 0.62
PDLIM7-208ENST00000493815 ITIH5Q86UX2 942 aa18.9■□□□□ 0.62
PDLIM7-208ENST00000493815 TMC8Q8IU68 726 aa18.9■□□□□ 0.62
PDLIM7-208ENST00000493815 VSTM4Q8IW00 320 aa18.9■□□□□ 0.62
PDLIM7-208ENST00000493815 SLC20A1Q8WUM9 679 aa18.9■□□□□ 0.62
PDLIM7-208ENST00000493815 ING5Q8WYH8 240 aa18.9■□□□□ 0.62
PDLIM7-208ENST00000493815 SECISBP2LQ93073 1101 aaKnown RBP18.9■□□□□ 0.62
PDLIM7-208ENST00000493815 ASB3Q9Y575 518 aa18.9■□□□□ 0.62
PDLIM7-208ENST00000493815 A0A0C4DFX4 3053 aa18.9■□□□□ 0.62
PDLIM7-208ENST00000493815 MED7O43513 233 aa18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 CSH1P0DML2 217 aa18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 CSH2P0DML3 217 aa18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 ZNF75DP51815 510 aa18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 SLC5A3P53794 718 aa18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 BCAT1P54687 386 aa18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 BST2Q10589 180 aaKnown RBP18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 PDZD4Q76G19 769 aaPredicted RBP18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 PIGZQ86VD9 579 aa18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 NUP93Q8N1F7 819 aa18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 EPS8L1Q8TE68 723 aa18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 NUP58Q9BVL2 599 aa18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 CLUHO75153 1309 aa18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 A0A1W2PRU2 124 aa18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 PIK3R2O00459 728 aa18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 RGS7P49802 495 aa18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 PDE6CP51160 858 aa18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 BPIFB4P59827 614 aa18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 MRPS5P82675 430 aaKnown RBP18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 STILQ15468 1287 aa18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 SMAD2Q15796 467 aaKnown RBP18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 FIGNQ5HY92 759 aa18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 CYP4A22Q5TCH4 519 aa18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 CYP26C1Q6V0L0 522 aa18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 GAREM2Q75VX8 874 aa18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 GET4Q7L5D6 327 aaPredicted RBP18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 DDX1Q92499 740 aaKnown RBP18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 IL21Q9HBE4 155 aa18.89■□□□□ 0.61
PDLIM7-208ENST00000493815 ITIH6Q6UXX5 1313 aa18.88■□□□□ 0.61
PDLIM7-208ENST00000493815 MMEP08473 750 aa18.88■□□□□ 0.61
PDLIM7-208ENST00000493815 FSHRP23945 695 aa18.88■□□□□ 0.61
PDLIM7-208ENST00000493815 GABRR2P28476 465 aa18.88■□□□□ 0.61
PDLIM7-208ENST00000493815 CASP14P31944 242 aa18.88■□□□□ 0.61
PDLIM7-208ENST00000493815 KRT9P35527 623 aa18.88■□□□□ 0.61
PDLIM7-208ENST00000493815 SLC8A3P57103 927 aa18.88■□□□□ 0.61
PDLIM7-208ENST00000493815 GOLGA8FQ08AF8 430 aa18.88■□□□□ 0.61
PDLIM7-208ENST00000493815 GOLGA8DPQ0D2H9 430 aa18.88■□□□□ 0.61
PDLIM7-208ENST00000493815 PRSS36Q5K4E3 855 aa18.88■□□□□ 0.61
PDLIM7-208ENST00000493815 PMF1Q6P1K2 205 aa18.88■□□□□ 0.61
PDLIM7-208ENST00000493815 TMC6Q7Z403 805 aa18.88■□□□□ 0.61
PDLIM7-208ENST00000493815 TMEM150AQ86TG1 271 aa18.88■□□□□ 0.61
PDLIM7-208ENST00000493815 CYTH4Q9UIA0 394 aa18.88■□□□□ 0.61
PDLIM7-208ENST00000493815 NOCTQ9UK39 431 aaKnown RBP18.88■□□□□ 0.61
PDLIM7-208ENST00000493815 MRPS23Q9Y3D9 190 aaKnown RBP18.88■□□□□ 0.61
PDLIM7-208ENST00000493815 MYH10P35580 1976 aa18.87■□□□□ 0.61
PDLIM7-208ENST00000493815 NOTCH4Q99466 2003 aa18.87■□□□□ 0.61
PDLIM7-208ENST00000493815 XPO1O14980 1071 aaKnown RBP18.87■□□□□ 0.61
PDLIM7-208ENST00000493815 MOSPD3O75425 235 aa18.87■□□□□ 0.61
PDLIM7-208ENST00000493815 CEBPBP17676 345 aa18.87■□□□□ 0.61
PDLIM7-208ENST00000493815 GPD2P43304 727 aa18.87■□□□□ 0.61
PDLIM7-208ENST00000493815 EPHA5P54756 1037 aa18.87■□□□□ 0.61
PDLIM7-208ENST00000493815 AAK1Q2M2I8 961 aa18.87■□□□□ 0.61
PDLIM7-208ENST00000493815 STXBP5Q5T5C0 1151 aa18.87■□□□□ 0.61
PDLIM7-208ENST00000493815 POTEHQ6S545 545 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms