RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 RLFQ13129 1914 aa7.15□□□□□ -1.27
VPS13B-205ENST00000493587 PHF2O75151 1096 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 FKBP6O75344 327 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 UFL1O94874 794 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 PDE8BO95263 885 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 SMIM18P0DKX4 95 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 CALM1P0DP23 149 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 CALM2P0DP24 149 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 CALM3P0DP25 149 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 CA4P22748 312 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 STX1BP61266 288 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 COPZ1P61923 177 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 UBE3CQ15386 1083 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 TRIP13Q15645 432 aaPredicted RBP7.14□□□□□ -1.27
VPS13B-205ENST00000493587 GRIK5Q16478 980 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 PGS1Q32NB8 556 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 SLC45A4Q5BKX6 768 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 PXDC1Q5TGL8 231 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 VSTM1Q6UX27 236 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 TPTE2Q6XPS3 522 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 SLC22A8Q8TCC7 542 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 IGDCC4Q8TDY8 1250 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 CNOT6LQ96LI5 555 aaKnown RBP7.14□□□□□ -1.27
VPS13B-205ENST00000493587 MAP3K14Q99558 947 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 OLFM1Q99784 485 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 WNT8AQ9H1J5 351 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 SCPEP1Q9HB40 452 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 CABP5Q9NP86 173 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 EPS15L1Q9UBC2 864 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 VANGL2Q9ULK5 521 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 TBC1D30Q9Y2I9 924 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 ZNF330Q9Y3S2 320 aaPredicted RBP7.14□□□□□ -1.27
VPS13B-205ENST00000493587 PCDHB6Q9Y5E3 794 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 SLC30A1Q9Y6M5 507 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 E9PMD0 336 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 PSMD12O00232 456 aaPredicted RBP7.14□□□□□ -1.27
VPS13B-205ENST00000493587 PEX1O43933 1283 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 THRAP10827 490 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 NELFEP18615 380 aaKnown RBP7.14□□□□□ -1.27
VPS13B-205ENST00000493587 GRK2P25098 689 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 EVI2BP34910 448 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 POLD2P49005 469 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 GNA12Q03113 381 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 CENPCQ03188 943 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 FUT2Q10981 343 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 MRPL28Q13084 256 aaKnown RBP7.14□□□□□ -1.27
VPS13B-205ENST00000493587 ZYXQ15942 572 aaKnown RBP7.14□□□□□ -1.27
VPS13B-205ENST00000493587 RILPL1Q5EBL4 403 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 SDE2Q6IQ49 451 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 ADGRA1Q86SQ6 560 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 ZNF507Q8TCN5 953 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 ZC3H15Q8WU90 426 aaKnown RBP7.14□□□□□ -1.27
VPS13B-205ENST00000493587 PTCD2Q8WV60 388 aaKnown RBP7.14□□□□□ -1.27
VPS13B-205ENST00000493587 FAM20AQ96MK3 541 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 RBM15Q96T37 977 aaKnown RBP eCLIP7.14□□□□□ -1.27
VPS13B-205ENST00000493587 DHRS9Q9BPW9 319 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 SENP6Q9GZR1 1112 aaPredicted RBP7.14□□□□□ -1.27
VPS13B-205ENST00000493587 ADNPQ9H2P0 1102 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 CD209Q9NNX6 404 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 PPP1R1BQ9UD71 204 aaPredicted RBP7.14□□□□□ -1.27
VPS13B-205ENST00000493587 FBXO2Q9UK22 296 aaPredicted RBP7.14□□□□□ -1.27
VPS13B-205ENST00000493587 POLHQ9Y253 713 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 PTPN22Q9Y2R2 807 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 LCTP09848 1927 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 KLRG2A4D1S0 409 aaPredicted RBP7.14□□□□□ -1.27
VPS13B-205ENST00000493587 TRIM64A6NGJ6 449 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 TRIM64BA6NI03 449 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 LRRIQ4A6NIV6 560 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 SNAP23O00161 211 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 TRAFD1O14545 582 aaPredicted RBP7.14□□□□□ -1.27
VPS13B-205ENST00000493587 THAP12O43422 761 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 GAS7O60861 476 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 ZNF254O75437 659 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 EEF1DP29692 281 aaKnown RBP7.14□□□□□ -1.27
VPS13B-205ENST00000493587 SERPINB1P30740 379 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 FDFT1P37268 417 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 CDK9P50750 372 aaKnown RBP7.14□□□□□ -1.27
VPS13B-205ENST00000493587 MAPK10P53779 464 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 LRRC63Q05C16 580 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 FCHO2Q0JRZ9 810 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 DSC3Q14574 896 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 PDK1Q15118 436 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 KIAA1755Q5JYT7 1200 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 RSBN1Q5VWQ0 802 aaPredicted RBP7.14□□□□□ -1.27
VPS13B-205ENST00000493587 NANOGP8Q6NSW7 305 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 UGT2A3Q6UWM9 527 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 OTOP3Q7RTS5 596 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 CAND1Q86VP6 1230 aaKnown RBP7.14□□□□□ -1.27
VPS13B-205ENST00000493587 METTL13Q8N6R0 699 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 PCYOX1LQ8NBM8 494 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 TSPAN14Q8NG11 270 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 HCAR2Q8TDS4 363 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 BCL7CQ8WUZ0 217 aaPredicted RBP7.14□□□□□ -1.27
VPS13B-205ENST00000493587 PSPC1Q8WXF1 523 aaKnown RBP7.14□□□□□ -1.27
VPS13B-205ENST00000493587 HERVK_113Q902F9 699 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 TMIGD2Q96BF3 282 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 TSG101Q99816 390 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 ACAT2Q9BWD1 397 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 MCM9Q9NXL9 1143 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 GABBR1Q9UBS5 961 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms