RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 SLC44A3Q8N4M1 653 aa12.31□□□□□ -0.44
CTSA-209ENST00000493522 KAT5Q92993 513 aa12.31□□□□□ -0.44
CTSA-209ENST00000493522 FUBP3Q96I24 572 aaKnown RBP eCLIP12.31□□□□□ -0.44
CTSA-209ENST00000493522 MYADMQ96S97 322 aa12.31□□□□□ -0.44
CTSA-209ENST00000493522 LSM14BQ9BX40 385 aaKnown RBP12.31□□□□□ -0.44
CTSA-209ENST00000493522 ZNF518BQ9C0D4 1074 aa12.31□□□□□ -0.44
CTSA-209ENST00000493522 ELOVL4Q9GZR5 314 aa12.31□□□□□ -0.44
CTSA-209ENST00000493522 FAM124BQ9H5Z6 455 aaPredicted RBP12.31□□□□□ -0.44
CTSA-209ENST00000493522 TBC1D17Q9HA65 648 aa12.31□□□□□ -0.44
CTSA-209ENST00000493522 ARHGEF3Q9NR81 526 aa12.31□□□□□ -0.44
CTSA-209ENST00000493522 KRT82Q9NSB4 513 aa12.31□□□□□ -0.44
CTSA-209ENST00000493522 HCFC1R1Q9NWW0 138 aa12.31□□□□□ -0.44
CTSA-209ENST00000493522 APEX2Q9UBZ4 518 aa12.31□□□□□ -0.44
CTSA-209ENST00000493522 PCDHB4Q9Y5E5 795 aa12.31□□□□□ -0.44
CTSA-209ENST00000493522 LGALS16A8MUM7 142 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 CLDN5O00501 218 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 PAPLNO95428 1278 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 ATF6P18850 670 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 BDNFP23560 247 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 PON1P27169 355 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 ANXA13P27216 316 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 ADORA2BP29275 332 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 GPR15P49685 360 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 RPL10AP62906 217 aaKnown RBP12.3□□□□□ -0.44
CTSA-209ENST00000493522 NTHL1P78549 312 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 APBA1Q02410 837 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 GCNT1Q02742 428 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 TAF12Q16514 161 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 CFAP221Q4G0U5 840 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 PABPC1LQ4VXU2 614 aaKnown RBP12.3□□□□□ -0.44
CTSA-209ENST00000493522 SDHAF4Q5VUM1 108 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 IQCEQ6IPM2 695 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 PHLDB3Q6NSJ2 640 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 GJB7Q6PEY0 223 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 TMEM270Q6UE05 265 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 GRASPQ7Z6J2 395 aaPredicted RBP12.3□□□□□ -0.44
CTSA-209ENST00000493522 ITIH5Q86UX2 942 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 UBR7Q8N806 425 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 STKLD1Q8NE28 680 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 GPR152Q8TDT2 470 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 WHAMMQ8TF30 809 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 GIPC2Q8TF65 315 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 ZNF512Q96ME7 567 aaPredicted RBP12.3□□□□□ -0.44
CTSA-209ENST00000493522 KREMEN1Q96MU8 473 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 CORO1BQ9BR76 489 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 B3GNT5Q9BYG0 378 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 UBE2TQ9NPD8 197 aaPredicted RBP12.3□□□□□ -0.44
CTSA-209ENST00000493522 CEP72Q9P209 647 aa12.3□□□□□ -0.44
CTSA-209ENST00000493522 ZFP37Q9Y6Q3 630 aaPredicted RBP12.3□□□□□ -0.44
CTSA-209ENST00000493522 MYL4P12829 197 aa12.29□□□□□ -0.44
CTSA-209ENST00000493522 LAMP2P13473 410 aa12.29□□□□□ -0.44
CTSA-209ENST00000493522 KRT5P13647 590 aa12.29□□□□□ -0.44
CTSA-209ENST00000493522 CD19P15391 556 aa12.29□□□□□ -0.44
CTSA-209ENST00000493522 GRIK1P39086 918 aa12.29□□□□□ -0.44
CTSA-209ENST00000493522 MAGEA11P43364 429 aa12.29□□□□□ -0.44
CTSA-209ENST00000493522 RAD23BP54727 409 aa12.29□□□□□ -0.44
CTSA-209ENST00000493522 MFAP3P55082 362 aa12.29□□□□□ -0.44
CTSA-209ENST00000493522 UBXN1Q04323 297 aa12.29□□□□□ -0.44
CTSA-209ENST00000493522 DDR2Q16832 855 aa12.29□□□□□ -0.44
CTSA-209ENST00000493522 ARHGAP44Q17R89 818 aa12.29□□□□□ -0.44
CTSA-209ENST00000493522 VSTM1Q6UX27 236 aa12.29□□□□□ -0.44
CTSA-209ENST00000493522 ENOSF1Q7L5Y1 443 aa12.29□□□□□ -0.44
CTSA-209ENST00000493522 FUKQ8N0W3 1084 aa12.29□□□□□ -0.44
CTSA-209ENST00000493522 CRYBG2Q8N1P7 616 aa12.29□□□□□ -0.44
CTSA-209ENST00000493522 C12orf29Q8N999 325 aa12.29□□□□□ -0.44
CTSA-209ENST00000493522 SLC4A11Q8NBS3 891 aa12.29□□□□□ -0.44
CTSA-209ENST00000493522 RBBP8NLQ8NC74 664 aaPredicted RBP12.29□□□□□ -0.44
CTSA-209ENST00000493522 SLC2A14Q8TDB8 520 aa12.29□□□□□ -0.44
CTSA-209ENST00000493522 SMARCD1Q96GM5 515 aa12.29□□□□□ -0.44
CTSA-209ENST00000493522 TMEM176AQ96HP8 235 aa12.29□□□□□ -0.44
CTSA-209ENST00000493522 FAM81BQ96LP2 452 aa12.29□□□□□ -0.44
CTSA-209ENST00000493522 PCMTD1Q96MG8 357 aaPredicted RBP12.29□□□□□ -0.44
CTSA-209ENST00000493522 HEXIM2Q96MH2 286 aaKnown RBP12.29□□□□□ -0.44
CTSA-209ENST00000493522 SIX2Q9NPC8 291 aa12.29□□□□□ -0.44
CTSA-209ENST00000493522 ASAH2Q9NR71 780 aa12.29□□□□□ -0.44
CTSA-209ENST00000493522 DNMT3BQ9UBC3 853 aaKnown RBP12.29□□□□□ -0.44
CTSA-209ENST00000493522 SIT1Q9Y3P8 196 aa12.29□□□□□ -0.44
CTSA-209ENST00000493522 ANHXE9PGG2 379 aa12.28□□□□□ -0.44
CTSA-209ENST00000493522 F8VP50 259 aa12.28□□□□□ -0.44
CTSA-209ENST00000493522 TRIM66O15016 1216 aa12.28□□□□□ -0.44
CTSA-209ENST00000493522 AP1G2O75843 785 aa12.28□□□□□ -0.44
CTSA-209ENST00000493522 SERPINC1P01008 464 aa12.28□□□□□ -0.44
CTSA-209ENST00000493522 DCNP07585 359 aaKnown RBP12.28□□□□□ -0.44
CTSA-209ENST00000493522 RHOP08100 348 aa12.28□□□□□ -0.44
CTSA-209ENST00000493522 PTPN2P17706 415 aa12.28□□□□□ -0.44
CTSA-209ENST00000493522 ACO1P21399 889 aaKnown RBP12.28□□□□□ -0.44
CTSA-209ENST00000493522 FSHRP23945 695 aa12.28□□□□□ -0.44
CTSA-209ENST00000493522 USP8P40818 1118 aa12.28□□□□□ -0.44
CTSA-209ENST00000493522 KLK7P49862 253 aa12.28□□□□□ -0.44
CTSA-209ENST00000493522 ZNF445P59923 1031 aa12.28□□□□□ -0.44
CTSA-209ENST00000493522 KCNMA1Q12791 1236 aa12.28□□□□□ -0.44
CTSA-209ENST00000493522 HTR4Q13639 388 aa12.28□□□□□ -0.44
CTSA-209ENST00000493522 SYCP1Q15431 976 aa12.28□□□□□ -0.44
CTSA-209ENST00000493522 FILIP1LQ4L180 1135 aa12.28□□□□□ -0.44
CTSA-209ENST00000493522 PDZD4Q76G19 769 aaPredicted RBP12.28□□□□□ -0.44
CTSA-209ENST00000493522 HS6ST3Q8IZP7 471 aa12.28□□□□□ -0.44
CTSA-209ENST00000493522 RNF214Q8ND24 703 aa12.28□□□□□ -0.44
CTSA-209ENST00000493522 ING5Q8WYH8 240 aa12.28□□□□□ -0.44
CTSA-209ENST00000493522 PSMG2Q969U7 264 aa12.28□□□□□ -0.44
CTSA-209ENST00000493522 JAKMIP2Q96AA8 810 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms