RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 Q6ZS52 159 aa21.91■■□□□ 1.1
CLTA-208ENST00000493185 ARL14EPQ8N8R7 260 aaPredicted RBP21.91■■□□□ 1.1
CLTA-208ENST00000493185 TTC16Q8NEE8 873 aa21.91■■□□□ 1.1
CLTA-208ENST00000493185 RIN3Q8TB24 985 aa21.91■■□□□ 1.1
CLTA-208ENST00000493185 TMC2Q8TDI7 906 aa21.91■■□□□ 1.1
CLTA-208ENST00000493185 CCDC34Q96HJ3 373 aa21.91■■□□□ 1.1
CLTA-208ENST00000493185 SLC22A12Q96S37 553 aa21.91■■□□□ 1.1
CLTA-208ENST00000493185 CYP2S1Q96SQ9 504 aa21.91■■□□□ 1.1
CLTA-208ENST00000493185 EPC1Q9H2F5 836 aa21.91■■□□□ 1.1
CLTA-208ENST00000493185 SMYD3Q9H7B4 428 aa21.91■■□□□ 1.1
CLTA-208ENST00000493185 NCDNQ9UBB6 729 aa21.91■■□□□ 1.1
CLTA-208ENST00000493185 ZNF292O60281 2723 aa21.9■■□□□ 1.1
CLTA-208ENST00000493185 ATP8B3O60423 1300 aa21.9■■□□□ 1.1
CLTA-208ENST00000493185 C2orf78A6NCI8 922 aa21.9■■□□□ 1.1
CLTA-208ENST00000493185 PRR29P0C7W0 189 aa21.9■■□□□ 1.1
CLTA-208ENST00000493185 ARSAP15289 507 aa21.9■■□□□ 1.1
CLTA-208ENST00000493185 PFKLP17858 780 aa21.9■■□□□ 1.1
CLTA-208ENST00000493185 HDCP19113 662 aa21.9■■□□□ 1.1
CLTA-208ENST00000493185 PPP3CCP48454 512 aa21.9■■□□□ 1.1
CLTA-208ENST00000493185 NOP14P78316 857 aaKnown RBP21.9■■□□□ 1.1
CLTA-208ENST00000493185 ZNF77Q15935 545 aa21.9■■□□□ 1.1
CLTA-208ENST00000493185 WDR44Q5JSH3 913 aa21.9■■□□□ 1.1
CLTA-208ENST00000493185 KRBA2Q6ZNG9 492 aa21.9■■□□□ 1.1
CLTA-208ENST00000493185 CPA6Q8N4T0 437 aa21.9■■□□□ 1.1
CLTA-208ENST00000493185 SECISBP2LQ93073 1101 aaKnown RBP21.9■■□□□ 1.1
CLTA-208ENST00000493185 EXOC4Q96A65 974 aa21.9■■□□□ 1.1
CLTA-208ENST00000493185 TTLL2Q9BWV7 592 aa21.9■■□□□ 1.1
CLTA-208ENST00000493185 ZNF518BQ9C0D4 1074 aa21.9■■□□□ 1.1
CLTA-208ENST00000493185 DUS2Q9NX74 493 aaKnown RBP21.9■■□□□ 1.1
CLTA-208ENST00000493185 GCNT4Q9P109 453 aa21.9■■□□□ 1.1
CLTA-208ENST00000493185 SMG5Q9UPR3 1016 aaKnown RBP21.9■■□□□ 1.1
CLTA-208ENST00000493185 TRAF3IP3Q9Y228 551 aa21.9■■□□□ 1.1
CLTA-208ENST00000493185 IFNAR2P48551 515 aa21.89■■□□□ 1.09
CLTA-208ENST00000493185 CDH8P55286 799 aa21.89■■□□□ 1.09
CLTA-208ENST00000493185 USP46P62068 366 aa21.89■■□□□ 1.09
CLTA-208ENST00000493185 DLG4P78352 724 aa21.89■■□□□ 1.09
CLTA-208ENST00000493185 GRSF1Q12849 480 aaKnown RBP eCLIP21.89■■□□□ 1.09
CLTA-208ENST00000493185 DPYDQ12882 1025 aa21.89■■□□□ 1.09
CLTA-208ENST00000493185 USP4Q13107 963 aa21.89■■□□□ 1.09
CLTA-208ENST00000493185 ZACNQ401N2 412 aa21.89■■□□□ 1.09
CLTA-208ENST00000493185 SCARA5Q6ZMJ2 495 aa21.89■■□□□ 1.09
CLTA-208ENST00000493185 KIAA2013Q8IYS2 634 aa21.89■■□□□ 1.09
CLTA-208ENST00000493185 OSCP1Q8WVF1 389 aa21.89■■□□□ 1.09
CLTA-208ENST00000493185 TNIP3Q96KP6 325 aa21.89■■□□□ 1.09
CLTA-208ENST00000493185 B3GNT5Q9BYG0 378 aa21.89■■□□□ 1.09
CLTA-208ENST00000493185 ARHGAP26Q9UNA1 814 aa21.89■■□□□ 1.09
CLTA-208ENST00000493185 GPR179Q6PRD1 2367 aa21.89■■□□□ 1.09
CLTA-208ENST00000493185 OTOL1A6NHN0 477 aaPredicted RBP21.88■■□□□ 1.09
CLTA-208ENST00000493185 CLDN5O00501 218 aa21.88■■□□□ 1.09
CLTA-208ENST00000493185 IKBKBO14920 756 aa21.88■■□□□ 1.09
CLTA-208ENST00000493185 MAPK13O15264 365 aa21.88■■□□□ 1.09
CLTA-208ENST00000493185 ZNF202O95125 648 aa21.88■■□□□ 1.09
CLTA-208ENST00000493185 PAPSS2O95340 614 aaPredicted RBP21.88■■□□□ 1.09
CLTA-208ENST00000493185 VNN1O95497 513 aa21.88■■□□□ 1.09
CLTA-208ENST00000493185 RAP1GAPP47736 663 aa21.88■■□□□ 1.09
CLTA-208ENST00000493185 SGSM1Q2NKQ1 1148 aa21.88■■□□□ 1.09
CLTA-208ENST00000493185 TMEM196Q5HYL7 178 aa21.88■■□□□ 1.09
CLTA-208ENST00000493185 SH3RF2Q8TEC5 729 aa21.88■■□□□ 1.09
CLTA-208ENST00000493185 TAF4BQ92750 862 aa21.88■■□□□ 1.09
CLTA-208ENST00000493185 ATP2A3Q93084 1043 aa21.88■■□□□ 1.09
CLTA-208ENST00000493185 SLITRK1Q96PX8 696 aa21.88■■□□□ 1.09
CLTA-208ENST00000493185 MED10Q9BTT4 135 aa21.88■■□□□ 1.09
CLTA-208ENST00000493185 GOLPH3LQ9H4A5 285 aa21.88■■□□□ 1.09
CLTA-208ENST00000493185 GDPD2Q9HCC8 539 aa21.88■■□□□ 1.09
CLTA-208ENST00000493185 RAB23Q9ULC3 237 aa21.88■■□□□ 1.09
CLTA-208ENST00000493185 FRYLO94915 3013 aa21.88■■□□□ 1.09
CLTA-208ENST00000493185 TRDMT1O14717 391 aaKnown RBP21.87■■□□□ 1.09
CLTA-208ENST00000493185 TCF3P15923 654 aa21.87■■□□□ 1.09
CLTA-208ENST00000493185 NR2F2P24468 414 aa21.87■■□□□ 1.09
CLTA-208ENST00000493185 CACNA2D1P54289 1103 aa21.87■■□□□ 1.09
CLTA-208ENST00000493185 BECN1Q14457 450 aa21.87■■□□□ 1.09
CLTA-208ENST00000493185 NFIL3Q16649 462 aa21.87■■□□□ 1.09
CLTA-208ENST00000493185 SV2AQ7L0J3 742 aa21.87■■□□□ 1.09
CLTA-208ENST00000493185 DCLK2Q8N568 766 aa21.87■■□□□ 1.09
CLTA-208ENST00000493185 ECT2Q9H8V3 914 aa21.87■■□□□ 1.09
CLTA-208ENST00000493185 MAPK8IP1Q9UQF2 711 aa21.87■■□□□ 1.09
CLTA-208ENST00000493185 WNT6Q9Y6F9 365 aa21.87■■□□□ 1.09
CLTA-208ENST00000493185 MYH10P35580 1976 aa21.87■■□□□ 1.09
CLTA-208ENST00000493185 ZNF840PA6NDX5 716 aa21.86■■□□□ 1.09
CLTA-208ENST00000493185 ABL1P00519 1130 aa21.86■■□□□ 1.09
CLTA-208ENST00000493185 RPL13P26373 211 aaKnown RBP21.86■■□□□ 1.09
CLTA-208ENST00000493185 PIK3CAP42336 1068 aa21.86■■□□□ 1.09
CLTA-208ENST00000493185 ID4P47928 161 aa21.86■■□□□ 1.09
CLTA-208ENST00000493185 VAMP7P51809 220 aa21.86■■□□□ 1.09
CLTA-208ENST00000493185 IFRD2Q12894 506 aaPredicted RBP21.86■■□□□ 1.09
CLTA-208ENST00000493185 TAF10Q12962 218 aa21.86■■□□□ 1.09
CLTA-208ENST00000493185 FSTL4Q6MZW2 842 aa21.86■■□□□ 1.09
CLTA-208ENST00000493185 INTS8Q75QN2 995 aaKnown RBP21.86■■□□□ 1.09
CLTA-208ENST00000493185 NUP93Q8N1F7 819 aa21.86■■□□□ 1.09
CLTA-208ENST00000493185 GUF1Q8N442 669 aaKnown RBP21.86■■□□□ 1.09
CLTA-208ENST00000493185 ELMO3Q96BJ8 720 aa21.86■■□□□ 1.09
CLTA-208ENST00000493185 TMEM30AQ9NV96 361 aa21.86■■□□□ 1.09
CLTA-208ENST00000493185 ATG2BQ96BY7 2078 aa21.86■■□□□ 1.09
CLTA-208ENST00000493185 RTN3O95197 1032 aaPredicted RBP21.85■■□□□ 1.09
CLTA-208ENST00000493185 ASS1P00966 412 aaKnown RBP21.85■■□□□ 1.09
CLTA-208ENST00000493185 KRT13P13646 458 aa21.85■■□□□ 1.09
CLTA-208ENST00000493185 TRIM21P19474 475 aaKnown RBP21.85■■□□□ 1.09
CLTA-208ENST00000493185 DRD1P21728 446 aa21.85■■□□□ 1.09
CLTA-208ENST00000493185 YWHAQP27348 245 aa21.85■■□□□ 1.09
CLTA-208ENST00000493185 GJA4P35212 333 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms