RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 TAF3Q5VWG9 929 aa14.23□□□□□ -0.13
MSH6-208ENST00000493177 E4F1Q66K89 784 aaPredicted RBP14.23□□□□□ -0.13
MSH6-208ENST00000493177 TPGS2Q68CL5 300 aa14.23□□□□□ -0.13
MSH6-208ENST00000493177 B3GALNT2Q8NCR0 500 aa14.23□□□□□ -0.13
MSH6-208ENST00000493177 PANX2Q96RD6 677 aa14.23□□□□□ -0.13
MSH6-208ENST00000493177 MYADMQ96S97 322 aa14.23□□□□□ -0.13
MSH6-208ENST00000493177 PPP1R9BQ96SB3 815 aa14.23□□□□□ -0.13
MSH6-208ENST00000493177 RTP3Q9BQQ7 232 aa14.23□□□□□ -0.13
MSH6-208ENST00000493177 ACBD6Q9BR61 282 aa14.23□□□□□ -0.13
MSH6-208ENST00000493177 HAUS4Q9H6D7 363 aa14.23□□□□□ -0.13
MSH6-208ENST00000493177 KCNK12Q9HB15 430 aa14.23□□□□□ -0.13
MSH6-208ENST00000493177 ACP6Q9NPH0 428 aa14.23□□□□□ -0.13
MSH6-208ENST00000493177 SEPT11Q9NVA2 429 aaKnown RBP14.23□□□□□ -0.13
MSH6-208ENST00000493177 C5orf42Q9H799 3197 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 OR6C75A6NL08 312 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 NRDCO43847 1150 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 ATP2C2O75185 946 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 ABLIM3O94929 683 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 OR4Q2P0C623 313 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 CYP11B1P15538 503 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 PTPN2P17706 415 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 PTPN1P18031 435 aaKnown RBP14.22□□□□□ -0.13
MSH6-208ENST00000493177 MRPL58Q14197 206 aaKnown RBP14.22□□□□□ -0.13
MSH6-208ENST00000493177 SGO2Q562F6 1265 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 MDH1BQ5I0G3 518 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 INTS6LQ5JSJ4 861 aaKnown RBP14.22□□□□□ -0.13
MSH6-208ENST00000493177 SMYD5Q6GMV2 418 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 IRF2BP2Q7Z5L9 587 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 NOP9Q86U38 636 aaKnown RBP14.22□□□□□ -0.13
MSH6-208ENST00000493177 DCP1BQ8IZD4 617 aaKnown RBP14.22□□□□□ -0.13
MSH6-208ENST00000493177 FBXL6Q8N531 539 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 OR10T2Q8NGX3 314 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 ING5Q8WYH8 240 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 FAM122AQ96E09 287 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 ZNF512Q96ME7 567 aaPredicted RBP14.22□□□□□ -0.13
MSH6-208ENST00000493177 PGLYRP2Q96PD5 576 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 TMEM209Q96SK2 561 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 LPIN3Q9BQK8 851 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 CORO1BQ9BR76 489 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 MED10Q9BTT4 135 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 SMOC2Q9H3U7 446 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 DEF6Q9H4E7 631 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 FAM49BQ9NUQ9 324 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 HCFC1R1Q9NWW0 138 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 EPS15L1Q9UBC2 864 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 AFF4Q9UHB7 1163 aaKnown RBP14.22□□□□□ -0.13
MSH6-208ENST00000493177 KIAA1257Q9ULG3 409 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 MRPS23Q9Y3D9 190 aaKnown RBP14.22□□□□□ -0.13
MSH6-208ENST00000493177 INSL5Q9Y5Q6 135 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 BZW2Q9Y6E2 419 aaKnown RBP14.22□□□□□ -0.13
MSH6-208ENST00000493177 ZFP37Q9Y6Q3 630 aaPredicted RBP14.22□□□□□ -0.13
MSH6-208ENST00000493177 TECTAO75443 2155 aa14.22□□□□□ -0.13
MSH6-208ENST00000493177 KMT2EQ8IZD2 1858 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 MYBPHLA2RUH7 354 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 STK25O00506 426 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 MED7O43513 233 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 LAMP2P13473 410 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 TNFAIP3P21580 790 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 ADORA2BP29275 332 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 HNRNPH3P31942 346 aaKnown RBP14.21□□□□□ -0.13
MSH6-208ENST00000493177 PRKCIP41743 596 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 CDR1P51861 262 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 CYP27A1Q02318 531 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 TWF1Q12792 350 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 PLD1Q13393 1074 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 CYP4A22Q5TCH4 519 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 RNF19BQ6ZMZ0 732 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 MTSS1LQ765P7 747 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 PDZD4Q76G19 769 aaPredicted RBP14.21□□□□□ -0.13
MSH6-208ENST00000493177 BMP8AQ7Z5Y6 402 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 VPS36Q86VN1 386 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 TCEAL8Q8IYN2 117 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 CRYBG2Q8N1P7 616 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 C12orf29Q8N999 325 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 EPS8L1Q8TE68 723 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 SLC20A1Q8WUM9 679 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 RSAD2Q8WXG1 361 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 NXPE3Q969Y0 559 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 BAG1Q99933 345 aaPredicted RBP14.21□□□□□ -0.13
MSH6-208ENST00000493177 AGPAT1Q99943 283 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.21□□□□□ -0.13
MSH6-208ENST00000493177 ZCWPW1Q9H0M4 648 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 CRTAC1Q9NQ79 661 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 DNMT3BQ9UBC3 853 aaKnown RBP14.21□□□□□ -0.13
MSH6-208ENST00000493177 GTF3C4Q9UKN8 822 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 CDH7Q9ULB5 785 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 DUSP12Q9UNI6 340 aa14.21□□□□□ -0.13
MSH6-208ENST00000493177 TBC1D4O60343 1298 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 SEC24AO95486 1093 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 RHOP08100 348 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 PLEKP08567 350 aaPredicted RBP14.2□□□□□ -0.14
MSH6-208ENST00000493177 CFHP08603 1231 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 POU2F2P09086 479 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 CCDC130P13994 396 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 EIF4A3P38919 411 aaKnown RBP14.2□□□□□ -0.14
MSH6-208ENST00000493177 ALDH1A3P47895 512 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 CDR2Q01850 454 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 MAPRE1Q15691 268 aaKnown RBP14.2□□□□□ -0.14
MSH6-208ENST00000493177 MEA1Q16626 185 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 CCDC142Q17RM4 750 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms