RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 CRY1Q16526 586 aa14.66□□□□□ -0.06
SAMM50-204ENST00000493161 EMC10Q5UCC4 262 aa14.66□□□□□ -0.06
SAMM50-204ENST00000493161 DAB2IPQ5VWQ8 1189 aa14.66□□□□□ -0.06
SAMM50-204ENST00000493161 LARP1BQ659C4 914 aaKnown RBP14.66□□□□□ -0.06
SAMM50-204ENST00000493161 CYP2U1Q7Z449 544 aa14.66□□□□□ -0.06
SAMM50-204ENST00000493161 LIMS2Q7Z4I7 341 aa14.66□□□□□ -0.06
SAMM50-204ENST00000493161 FILIP1Q7Z7B0 1213 aa14.66□□□□□ -0.06
SAMM50-204ENST00000493161 FSIP1Q8NA03 581 aa14.66□□□□□ -0.06
SAMM50-204ENST00000493161 MYLPFQ96A32 169 aa14.66□□□□□ -0.06
SAMM50-204ENST00000493161 FUBP3Q96I24 572 aaKnown RBP eCLIP14.66□□□□□ -0.06
SAMM50-204ENST00000493161 CNOT6LQ96LI5 555 aaKnown RBP14.66□□□□□ -0.06
SAMM50-204ENST00000493161 SYT15Q9BQS2 421 aa14.66□□□□□ -0.06
SAMM50-204ENST00000493161 TMEM9BQ9NQ34 198 aa14.66□□□□□ -0.06
SAMM50-204ENST00000493161 MMP17Q9ULZ9 603 aa14.66□□□□□ -0.06
SAMM50-204ENST00000493161 HELZP42694 1942 aaKnown RBP14.66□□□□□ -0.06
SAMM50-204ENST00000493161 THADAQ6YHU6 1953 aa14.65□□□□□ -0.06
SAMM50-204ENST00000493161 PTPRDP23468 1912 aa14.65□□□□□ -0.06
SAMM50-204ENST00000493161 NFATC1O95644 943 aa14.65□□□□□ -0.06
SAMM50-204ENST00000493161 PDGFRBP09619 1106 aa14.65□□□□□ -0.06
SAMM50-204ENST00000493161 HOXB3P14651 431 aaPredicted RBP14.65□□□□□ -0.06
SAMM50-204ENST00000493161 PCSK1P29120 753 aa14.65□□□□□ -0.06
SAMM50-204ENST00000493161 GRIK1P39086 918 aa14.65□□□□□ -0.06
SAMM50-204ENST00000493161 UAP1L1Q3KQV9 507 aa14.65□□□□□ -0.06
SAMM50-204ENST00000493161 ARMCX6Q7L4S7 300 aa14.65□□□□□ -0.06
SAMM50-204ENST00000493161 C12orf40Q86WS4 652 aa14.65□□□□□ -0.06
SAMM50-204ENST00000493161 ADGRG2Q8IZP9 1017 aa14.65□□□□□ -0.06
SAMM50-204ENST00000493161 ALLCQ8N6M5 410 aa14.65□□□□□ -0.06
SAMM50-204ENST00000493161 OLIG1Q8TAK6 271 aa14.65□□□□□ -0.06
SAMM50-204ENST00000493161 PIGKQ92643 395 aa14.65□□□□□ -0.06
SAMM50-204ENST00000493161 HPDLQ96IR7 371 aa14.65□□□□□ -0.06
SAMM50-204ENST00000493161 CLIC6Q96NY7 704 aa14.65□□□□□ -0.06
SAMM50-204ENST00000493161 FNBP1Q96RU3 617 aa14.65□□□□□ -0.06
SAMM50-204ENST00000493161 TMEM74BQ9NUR3 256 aa14.65□□□□□ -0.06
SAMM50-204ENST00000493161 SMPD4Q9NXE4 827 aa14.65□□□□□ -0.06
SAMM50-204ENST00000493161 MAGEC2Q9UBF1 373 aaPredicted RBP14.65□□□□□ -0.06
SAMM50-204ENST00000493161 MBD1Q9UIS9 605 aaPredicted RBP14.65□□□□□ -0.06
SAMM50-204ENST00000493161 FBXO2Q9UK22 296 aaPredicted RBP14.65□□□□□ -0.06
SAMM50-204ENST00000493161 EXOC7Q9UPT5 735 aa14.65□□□□□ -0.06
SAMM50-204ENST00000493161 SMC3Q9UQE7 1217 aa14.65□□□□□ -0.06
SAMM50-204ENST00000493161 NME7Q9Y5B8 376 aa14.65□□□□□ -0.06
SAMM50-204ENST00000493161 AKAP13Q12802 2813 aa14.65□□□□□ -0.06
SAMM50-204ENST00000493161 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 ZNF840PA6NDX5 716 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 SGK1O00141 431 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 PRPF6O94906 941 aaKnown RBP14.64□□□□□ -0.07
SAMM50-204ENST00000493161 KLF8O95600 359 aaPredicted RBP14.64□□□□□ -0.07
SAMM50-204ENST00000493161 BMP15O95972 392 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 LDHAP00338 332 aaKnown RBP14.64□□□□□ -0.07
SAMM50-204ENST00000493161 TMEM191BP0C7N4 346 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 CEACAM1P13688 526 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 GAP43P17677 238 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 GARTP22102 1010 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 PTGER3P43115 390 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 CACNA2D1P54289 1103 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 CYP27A1Q02318 531 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 DHCR24Q15392 516 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 TMEFF1Q8IYR6 380 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 SYCP3Q8IZU3 236 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 IL17RCQ8NAC3 791 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 KDF1Q8NAX2 398 aaPredicted RBP14.64□□□□□ -0.07
SAMM50-204ENST00000493161 TXNDC5Q8NBS9 432 aaKnown RBP14.64□□□□□ -0.07
SAMM50-204ENST00000493161 GLIS3Q8NEA6 775 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 DEFB124Q8NES8 71 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 SPATA18Q8TC71 538 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 SPATA17Q96L03 361 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 SCNM1Q9BWG6 230 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 ADAM33Q9BZ11 813 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 PANK2Q9BZ23 570 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 TMEM30AQ9NV96 361 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 INTS13Q9NVM9 706 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 SEL1LQ9UBV2 794 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 STK17AQ9UEE5 414 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 CDH9Q9ULB4 789 aa14.64□□□□□ -0.07
SAMM50-204ENST00000493161 CIZ1Q9ULV3 898 aaPredicted RBP14.64□□□□□ -0.07
SAMM50-204ENST00000493161 A0A087X0B3 334 aa14.63□□□□□ -0.07
SAMM50-204ENST00000493161 IDEP14735 1019 aa14.63□□□□□ -0.07
SAMM50-204ENST00000493161 CSRP1P21291 193 aaKnown RBP14.63□□□□□ -0.07
SAMM50-204ENST00000493161 TIE1P35590 1138 aa14.63□□□□□ -0.07
SAMM50-204ENST00000493161 P2RY2P41231 377 aa14.63□□□□□ -0.07
SAMM50-204ENST00000493161 SLC7A9P82251 487 aa14.63□□□□□ -0.07
SAMM50-204ENST00000493161 RRAGBQ5VZM2 374 aa14.63□□□□□ -0.07
SAMM50-204ENST00000493161 KIAA1211LQ6NV74 962 aa14.63□□□□□ -0.07
SAMM50-204ENST00000493161 FAM173BQ6P4H8 233 aa14.63□□□□□ -0.07
SAMM50-204ENST00000493161 RHBDF2Q6PJF5 856 aa14.63□□□□□ -0.07
SAMM50-204ENST00000493161 VSTM1Q6UX27 236 aa14.63□□□□□ -0.07
SAMM50-204ENST00000493161 C4orf50Q6ZRC1 276 aa14.63□□□□□ -0.07
SAMM50-204ENST00000493161 DENND5BQ6ZUT9 1274 aa14.63□□□□□ -0.07
SAMM50-204ENST00000493161 SV2BQ7L1I2 683 aa14.63□□□□□ -0.07
SAMM50-204ENST00000493161 BRAPQ7Z569 592 aa14.63□□□□□ -0.07
SAMM50-204ENST00000493161 CBWD2Q8IUF1 395 aa14.63□□□□□ -0.07
SAMM50-204ENST00000493161 GATA6Q92908 595 aa14.63□□□□□ -0.07
SAMM50-204ENST00000493161 PCED1BQ96HM7 432 aa14.63□□□□□ -0.07
SAMM50-204ENST00000493161 MRPL45Q9BRJ2 306 aaKnown RBP14.63□□□□□ -0.07
SAMM50-204ENST00000493161 FSCN3Q9NQT6 498 aa14.63□□□□□ -0.07
SAMM50-204ENST00000493161 OLFML3Q9NRN5 406 aa14.63□□□□□ -0.07
SAMM50-204ENST00000493161 TRPM5Q9NZQ8 1165 aa14.63□□□□□ -0.07
SAMM50-204ENST00000493161 PCDHB13Q9Y5F0 798 aa14.63□□□□□ -0.07
SAMM50-204ENST00000493161 CPQQ9Y646 472 aa14.63□□□□□ -0.07
SAMM50-204ENST00000493161 ATXN2Q99700 1313 aaKnown RBP14.63□□□□□ -0.07
SAMM50-204ENST00000493161 WDFY3Q8IZQ1 3526 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms