RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	OAZ2	O95190	189 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	CYP17A1	P05093	508 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	ITGAV	P06756	1048 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	CYP21A2	P08686	494 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	USP17L7	P0C7H9	530 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	LIG1	P18858	919 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	COL8A1	P27658	744 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	NTSR1	P30989	418 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	RPL9	P32969	192 aa	Known RBP	5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	ARL2	P36404	184 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	DMP1	Q13316	513 aa	Predicted RBP	5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	ILK	Q13418	452 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	PRPF4B	Q13523	1007 aa	Known RBP	5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	TEAD4	Q15561	434 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	PRAMEF14	Q5SWL7	426 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	EEF1DP3	Q658K8	133 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	SDE2	Q6IQ49	451 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	ARMCX5	Q6P1M9	558 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	CASC1	Q6TDU7	716 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	LAYN	Q6UX15	382 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	USP53	Q70EK8	1073 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	C12orf40	Q86WS4	652 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	REXO1	Q8N1G1	1221 aa	Known RBP	5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	EID2	Q8N6I1	236 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	ZNF713	Q8N859	430 aa	Predicted RBP	5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	FANCB	Q8NB91	859 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	RFFL	Q8WZ73	363 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	SNX19	Q92543	992 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	CCDC97	Q96F63	343 aa	Predicted RBP	5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	MRGPRX1	Q96LB2	322 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	FAM20A	Q96MK3	541 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	SLC22A12	Q96S37	553 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	SLK	Q9H2G2	1235 aa	Predicted RBP	5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	C6orf50	Q9HD87	102 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	DIAPH3	Q9NSV4	1193 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	RAD54B	Q9Y620	910 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	SLCO1B1	Q9Y6L6	691 aa		5.84	□□□□□ -1.47
SEC13-219	ENST00000492602	CNTNAP5	Q8WYK1	1306 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	TRAV19	A0A0A6YYK7	116 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	VPS37C	A5D8V6	355 aa	Predicted RBP	5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	ZBTB39	O15060	712 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	EDIL3	O43854	480 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	USP12	O75317	370 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	P4HB	P07237	508 aa	Known RBP	5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	GSPT1	P15170	499 aa	Known RBP	5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	HMGA1	P17096	107 aa	Known RBP	5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	ATP2B1	P20020	1258 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	ABCB4	P21439	1286 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	HSPA4	P34932	840 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	EIF2D	P41214	584 aa	Known RBP	5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	LSS	P48449	732 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	YARS	P54577	528 aa	Known RBP	5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	OSTN	P61366	133 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	ST3GAL1	Q11201	340 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	HDAC1	Q13547	482 aa	Predicted RBP	5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	MYBPC2	Q14324	1141 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	DHCR24	Q15392	516 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	DCAF4L1	Q3SXM0	396 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	SLC39A12	Q504Y0	691 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	C10orf76	Q5T2E6	689 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	PPP4R3A	Q6IN85	833 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	ADAT2	Q7Z6V5	191 aa	Known RBP	5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	MICU3	Q86XE3	530 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	MIB1	Q86YT6	1006 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	ZBTB8OS	Q8IWT0	167 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	C4orf19	Q8IY42	314 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	CHPF	Q8IZ52	775 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	ADGRG2	Q8IZP9	1017 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	TMTC2	Q8N394	836 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	ARL14EP	Q8N8R7	260 aa	Predicted RBP	5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	STKLD1	Q8NE28	680 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	C1orf216	Q8TAB5	229 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	KCNV2	Q8TDN2	545 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	NANOS1	Q8WY41	292 aa	Known RBP	5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	C18orf25	Q96B23	403 aa	Predicted RBP	5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	POM121	Q96HA1	1249 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	ZMAT2	Q96NC0	199 aa	Known RBP	5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	CCNL2	Q96S94	520 aa	Predicted RBP	5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	LXN	Q9BS40	222 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	POLR3F	Q9H1D9	316 aa	Predicted RBP	5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	TMEM206	Q9H813	350 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	POLR1B	Q9H9Y6	1135 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	ASCL3	Q9NQ33	180 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	TOPORS	Q9NS56	1045 aa	Predicted RBP	5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	HSFX1	Q9UBD0	423 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	ADAMTS1	Q9UHI8	967 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	PLAA	Q9Y263	795 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	SLC12A7	Q9Y666	1083 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	CENPE	Q02224	2701 aa		5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	ZNF638	Q14966	1978 aa	Known RBP	5.83	□□□□□ -1.48
SEC13-219	ENST00000492602	PHLPP2	Q6ZVD8	1323 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602		A0A1B0GTQ1	180 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	KCNJ18	B7U540	433 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602		M0QZQ0	153 aa		5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	SCAMP3	O14828	347 aa	Known RBP	5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	PAPSS1	O43252	624 aa	Predicted RBP	5.82	□□□□□ -1.48
SEC13-219	ENST00000492602	EFS	O43281	561 aa		5.82	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms