RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 APOBEC3GQ9HC16 384 aaKnown RBP12.56□□□□□ -0.4
MDC1-207ENST00000492462 TRPC7Q9HCX4 862 aa12.56□□□□□ -0.4
MDC1-207ENST00000492462 FANCMQ8IYD8 2048 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 C2orf78A6NCI8 922 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 TRIM49BA6NDI0 452 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 CCNE1P24864 410 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 RPL13P26373 211 aaKnown RBP12.55□□□□□ -0.4
MDC1-207ENST00000492462 AVPR1AP37288 418 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 NDST1P52848 882 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 EDRF1Q3B7T1 1238 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 ARHGAP29Q52LW3 1261 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 TRIM68Q6AZZ1 485 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 TXNDC11Q6PKC3 985 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 ZNF852Q6ZMS4 543 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 DENND5BQ6ZUT9 1274 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 INTS8Q75QN2 995 aaKnown RBP12.55□□□□□ -0.4
MDC1-207ENST00000492462 ACOT1Q86TX2 421 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 C1orf210Q8IVY1 113 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 CELF5Q8N6W0 485 aaKnown RBP12.55□□□□□ -0.4
MDC1-207ENST00000492462 CSGALNACT1Q8TDX6 532 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 SEMA4DQ92854 862 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 SMARCE1Q969G3 411 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 CLDN23Q96B33 292 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 SPATA17Q96L03 361 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 C8orf48Q96LL4 319 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 GSDMAQ96QA5 445 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 TWNKQ96RR1 684 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 KCNK16Q96T55 309 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 OSBPL6Q9BZF3 934 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 RMND1Q9NWS8 449 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 OBP2AQ9NY56 170 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 UXTQ9UBK9 157 aaPredicted RBP12.55□□□□□ -0.4
MDC1-207ENST00000492462 MAN1B1Q9UKM7 699 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 SETXQ7Z333 2677 aaKnown RBP12.55□□□□□ -0.4
MDC1-207ENST00000492462 ATG2BQ96BY7 2078 aa12.55□□□□□ -0.4
MDC1-207ENST00000492462 HELZP42694 1942 aaKnown RBP12.54□□□□□ -0.4
MDC1-207ENST00000492462 GPR179Q6PRD1 2367 aa12.54□□□□□ -0.4
MDC1-207ENST00000492462 OTOL1A6NHN0 477 aaPredicted RBP12.54□□□□□ -0.4
MDC1-207ENST00000492462 MAN2B1O00754 1011 aa12.54□□□□□ -0.4
MDC1-207ENST00000492462 SMC2O95347 1197 aa12.54□□□□□ -0.4
MDC1-207ENST00000492462 KRT13P13646 458 aa12.54□□□□□ -0.4
MDC1-207ENST00000492462 CCDC130P13994 396 aa12.54□□□□□ -0.4
MDC1-207ENST00000492462 CD44P16070 742 aaKnown RBP12.54□□□□□ -0.4
MDC1-207ENST00000492462 BMP6P22004 513 aa12.54□□□□□ -0.4
MDC1-207ENST00000492462 DDX6P26196 483 aaKnown RBP eCLIP12.54□□□□□ -0.4
MDC1-207ENST00000492462 ANXA13P27216 316 aa12.54□□□□□ -0.4
MDC1-207ENST00000492462 IFRD2Q12894 506 aaPredicted RBP12.54□□□□□ -0.4
MDC1-207ENST00000492462 ANKRD40Q6AI12 368 aa12.54□□□□□ -0.4
MDC1-207ENST00000492462 FAM35AQ86V20 835 aa12.54□□□□□ -0.4
MDC1-207ENST00000492462 FUKQ8N0W3 1084 aa12.54□□□□□ -0.4
MDC1-207ENST00000492462 ARL14EPQ8N8R7 260 aaPredicted RBP12.54□□□□□ -0.4
MDC1-207ENST00000492462 FAM3CQ92520 227 aa12.54□□□□□ -0.4
MDC1-207ENST00000492462 NKD2Q969F2 451 aaPredicted RBP12.54□□□□□ -0.4
MDC1-207ENST00000492462 CCDC34Q96HJ3 373 aa12.54□□□□□ -0.4
MDC1-207ENST00000492462 NELL2Q99435 816 aa12.54□□□□□ -0.4
MDC1-207ENST00000492462 FAM83CQ9BQN1 747 aa12.54□□□□□ -0.4
MDC1-207ENST00000492462 TTLL2Q9BWV7 592 aa12.54□□□□□ -0.4
MDC1-207ENST00000492462 BCO2Q9BYV7 579 aa12.54□□□□□ -0.4
MDC1-207ENST00000492462 ELOVL4Q9GZR5 314 aa12.54□□□□□ -0.4
MDC1-207ENST00000492462 HPS4Q9NQG7 708 aa12.54□□□□□ -0.4
MDC1-207ENST00000492462 GKN1Q9NS71 199 aa12.54□□□□□ -0.4
MDC1-207ENST00000492462 RBM12Q9NTZ6 932 aaKnown RBP12.54□□□□□ -0.4
MDC1-207ENST00000492462 TDP1Q9NUW8 608 aa12.54□□□□□ -0.4
MDC1-207ENST00000492462 SPATA6Q9NWH7 488 aaPredicted RBP12.54□□□□□ -0.4
MDC1-207ENST00000492462 GCNT4Q9P109 453 aa12.54□□□□□ -0.4
MDC1-207ENST00000492462 R4GN57 208 aa12.54□□□□□ -0.4
MDC1-207ENST00000492462 SPECC1L-ADORA2AF8WAN1 911 aa12.53□□□□□ -0.4
MDC1-207ENST00000492462 TRIM66O15016 1216 aa12.53□□□□□ -0.4
MDC1-207ENST00000492462 CETN3O15182 167 aa12.53□□□□□ -0.4
MDC1-207ENST00000492462 SP9P0CG40 484 aa12.53□□□□□ -0.4
MDC1-207ENST00000492462 ARSAP15289 507 aa12.53□□□□□ -0.4
MDC1-207ENST00000492462 CTHP32929 405 aa12.53□□□□□ -0.4
MDC1-207ENST00000492462 KPNA1P52294 538 aaPredicted RBP12.53□□□□□ -0.4
MDC1-207ENST00000492462 MCCD1P59942 119 aaPredicted RBP12.53□□□□□ -0.4
MDC1-207ENST00000492462 NOP14P78316 857 aaKnown RBP12.53□□□□□ -0.4
MDC1-207ENST00000492462 ZXDBP98169 803 aa12.53□□□□□ -0.4
MDC1-207ENST00000492462 TAF10Q12962 218 aa12.53□□□□□ -0.4
MDC1-207ENST00000492462 MTAPQ13126 283 aa12.53□□□□□ -0.4
MDC1-207ENST00000492462 ACAP1Q15027 740 aa12.53□□□□□ -0.4
MDC1-207ENST00000492462 ST3GAL2Q16842 350 aa12.53□□□□□ -0.4
MDC1-207ENST00000492462 COBLL1Q53SF7 1204 aa12.53□□□□□ -0.4
MDC1-207ENST00000492462 TSSK4Q6SA08 328 aa12.53□□□□□ -0.4
MDC1-207ENST00000492462 ZC3H3Q8IXZ2 948 aaKnown RBP12.53□□□□□ -0.4
MDC1-207ENST00000492462 C12orf29Q8N999 325 aa12.53□□□□□ -0.4
MDC1-207ENST00000492462 TTC16Q8NEE8 873 aa12.53□□□□□ -0.4
MDC1-207ENST00000492462 TAF4BQ92750 862 aa12.53□□□□□ -0.4
MDC1-207ENST00000492462 CHFRQ96EP1 664 aa12.53□□□□□ -0.4
MDC1-207ENST00000492462 MED10Q9BTT4 135 aa12.53□□□□□ -0.4
MDC1-207ENST00000492462 EBF3Q9H4W6 596 aa12.53□□□□□ -0.4
MDC1-207ENST00000492462 LMAN1LQ9HAT1 526 aa12.53□□□□□ -0.4
MDC1-207ENST00000492462 TMEM8AQ9HCN3 771 aa12.53□□□□□ -0.4
MDC1-207ENST00000492462 FAM49BQ9NUQ9 324 aa12.53□□□□□ -0.4
MDC1-207ENST00000492462 ZMYM5Q9UJ78 669 aa12.53□□□□□ -0.4
MDC1-207ENST00000492462 RALYQ9UKM9 306 aaKnown RBP12.53□□□□□ -0.4
MDC1-207ENST00000492462 CIZ1Q9ULV3 898 aaPredicted RBP12.53□□□□□ -0.4
MDC1-207ENST00000492462 MRPS17Q9Y2R5 130 aaKnown RBP12.53□□□□□ -0.4
MDC1-207ENST00000492462 FAM208BQ5VWN6 2430 aa12.53□□□□□ -0.4
MDC1-207ENST00000492462 SPTBN2O15020 2390 aa12.52□□□□□ -0.4
MDC1-207ENST00000492462 CEP250Q9BV73 2442 aa12.52□□□□□ -0.4
MDC1-207ENST00000492462 TRAV19A0A0A6YYK7 116 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms