RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 CD300EQ496F6 205 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 LONRF3Q496Y0 759 aa3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 FCRL6Q6DN72 434 aa3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 CRELD2Q6UXH1 353 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 UNC13DQ70J99 1090 aa3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 FAM186BQ8IYM0 893 aa3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 ADGRG5Q8IZF4 528 aa3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 BOD1Q96IK1 185 aa3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 SNX22Q96L94 193 aa3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 TTYH3Q9C0H2 523 aa3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 REXO4Q9GZR2 422 aaKnown RBP3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 MS4A7Q9GZW8 240 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 SIK2Q9H0K1 926 aa3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 UNKLQ9H9P5 680 aaKnown RBP3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 ALG13Q9NP73 1137 aaKnown RBP3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 PNPLA8Q9NP80 782 aa3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 STARD7Q9NQZ5 370 aa3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 MYO1AQ9UBC5 1043 aa3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 DMTF1Q9Y222 760 aa3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 E7ENX8 843 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 TRIM38O00635 465 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 C1QL1O75973 258 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 FGF18O76093 207 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 IGKV2-30P06310 120 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 ANXA2P07355 339 aaKnown RBP3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 HARSP12081 509 aaKnown RBP3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 ABCB4P21439 1286 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 GATA3P23771 443 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 CARSP49589 748 aaKnown RBP3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 HNRNPMP52272 730 aaKnown RBP eCLIP3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 VAV2P52735 878 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 TAP2Q03519 686 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 IQCB1Q15051 598 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 BRD3Q15059 726 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 NPY5RQ15761 445 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 TUBB8Q3ZCM7 444 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 DGKKQ5KSL6 1271 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 C10orf62Q5T681 223 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 VPS53Q5VIR6 699 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 IZUMO3Q5VZ72 239 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 Q6ZNX1 250 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 ZNF788Q6ZQV5 615 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 KCTD20Q7Z5Y7 419 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 CLNKQ7Z7G1 428 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 MPP5Q8N3R9 675 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 ATP11CQ8NB49 1132 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 RAPGEF4Q8WZA2 1011 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 TMEM125Q96AQ2 219 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 RNF31Q96EP0 1072 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 TNIP3Q96KP6 325 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 Q96MF0 132 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 FCRL4Q96PJ5 515 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 ARPC5LQ9BPX5 153 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 ADGRE3Q9BY15 652 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 KRTAP2-2Q9BYT5 123 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 KLK15Q9H2R5 256 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 XPNPEP3Q9NQH7 507 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 MID2Q9UJV3 735 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 PADI4Q9UM07 663 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 PCDHGB2Q9Y5G2 931 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 NOX1Q9Y5S8 564 aa3.53□□□□□ -1.84
HMGB1P30-201ENST00000492455 SPATA31A3Q5VYP0 1347 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 CGB1A6NKQ9 187 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 CLCA1A8K7I4 914 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 hCG_1984214I3L0E3 225 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 APOL1O14791 398 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 A1BGP04217 495 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 CSF1RP07333 972 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 ATXN1LP0C7T5 689 aaKnown RBP3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 SETSIPP0DME0 302 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 BTF3P20290 206 aaKnown RBP3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 PPM1AP35813 382 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 LOXL3P58215 753 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 SP2Q02086 613 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 HLXQ14774 488 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 MPEG1Q2M385 716 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 PTCHD3Q3KNS1 767 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 PLA1AQ53H76 456 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 TMEM108Q6UXF1 575 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 GPR149Q86SP6 731 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 FAM9AQ8IZU1 332 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 CCDC33Q8N5R6 958 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 VGLL2Q8N8G2 317 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 ACTRT2Q8TDY3 377 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 BRI3BPQ8WY22 251 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 SPSB4Q96A44 273 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 C18orf8Q96DM3 657 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 IQCDQ96DY2 449 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 NELL2Q99435 816 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 STK31Q9BXU1 1019 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 WDR12Q9GZL7 423 aaKnown RBP3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 CXorf36Q9H7Y0 433 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 CERS4Q9HA82 394 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 GALNT9Q9HCQ5 603 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 PLCB1Q9NQ66 1216 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 CASS4Q9NQ75 786 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 SERHLQ9NQF3 203 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 TBCCD1Q9NVR7 557 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 DNMT3BQ9UBC3 853 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms