RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 AMPD2Q01433 879 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 ENPEPQ07075 957 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 GRSF1Q12849 480 aaKnown RBP eCLIP8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 PUM1Q14671 1186 aaKnown RBP eCLIP8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 NFIL3Q16649 462 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 GAB4Q2WGN9 574 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 EML3Q32P44 896 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 WDR72Q3MJ13 1102 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 C1orf220Q5T0J3 134 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 FOXD4L5Q5VV16 416 aaPredicted RBP8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 TDRD10Q5VZ19 366 aaKnown RBP8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 TRIM68Q6AZZ1 485 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 LAIR1Q6GTX8 287 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 PKN3Q6P5Z2 889 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 PAQR9Q6ZVX9 377 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 WDR5BQ86VZ2 330 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 NELFCDQ8IXH7 590 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 ARL14EPQ8N8R7 260 aaPredicted RBP8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 FSIP1Q8NA03 581 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 TTC8Q8TAM2 541 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 TMC2Q8TDI7 906 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 FOXD4L4Q8WXT5 416 aaPredicted RBP8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 EZH1Q92800 747 aaPredicted RBP8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 CCDC127Q96BQ5 260 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 FNBP1Q96RU3 617 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 MMS19Q96T76 1030 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 B3GNT5Q9BYG0 378 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 PARD6AQ9NPB6 346 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 EHD2Q9NZN4 543 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 SERTAD1Q9UHV2 236 aa8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 MAGED2Q9UNF1 606 aaPredicted RBP8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 R3HCC1Q9Y3T6 440 aaKnown RBP8.94□□□□□ -0.98
SMARCB1-207ENST00000491967 A0A0A0MRY4 1105 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 LRRIQ3A6PVS8 624 aaPredicted RBP8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 PRR5-ARHGAP8B1AHC4 643 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 F8VP50 259 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 TNFRSF10BO14763 440 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 MAPK13O15264 365 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 ATG13O75143 517 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 OAS1P00973 400 aaKnown RBP8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 RPN1P04843 607 aaKnown RBP8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 RETP07949 1114 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 PFKFB1P16118 471 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 DRD1P21728 446 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 HOXC13P31276 330 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 GJA4P35212 333 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 FNTBP49356 437 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 PDE6CP51160 858 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 CYP2J2P51589 502 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 CACNA2D1P54289 1103 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 ARHGAP8P85298 464 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 MTF1Q14872 753 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 ZACNQ401N2 412 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 KMT5BQ4FZB7 885 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 FBXO43Q4G163 708 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 CC2D1AQ6P1N0 951 aaPredicted RBP8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 DENND5BQ6ZUT9 1274 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 SCN4BQ8IWT1 228 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 GRAMD1CQ8IYS0 662 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 ADGRG2Q8IZP9 1017 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 CRYBG2Q8N1P7 616 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 CAMKK1Q8N5S9 505 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 NOC3LQ8WTT2 800 aaKnown RBP8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 SECISBP2LQ93073 1101 aaKnown RBP8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 SYAP1Q96A49 352 aaPredicted RBP8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 ELOVL4Q9GZR5 314 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 RNF38Q9H0F5 515 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 LINC00597Q9H2U6 94 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 SNX25Q9H3E2 840 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 DPEP3Q9H4B8 488 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 ECT2Q9H8V3 914 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 NCDNQ9UBB6 729 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 TRAF3IP3Q9Y228 551 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 GTF3C3Q9Y5Q9 886 aa8.93□□□□□ -0.98
SMARCB1-207ENST00000491967 ABCA7Q8IZY2 2146 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 MYH10P35580 1976 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 A0A1B0GVL5 298 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 A0A1W2PQ27 194 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 A0A1W2PQ64 194 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 A0A1W2PQD8 194 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 EXOC3O60645 756 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 RHOBTB3O94955 611 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 EGFP01133 1207 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 ZDHHC11BP0C7U3 371 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 SDHBP21912 280 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 GRIK1P39086 918 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 RAP1GAPP47736 663 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 CASP4P49662 377 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 TUBP50607 506 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 DLG4P78352 724 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 LMNB2Q03252 620 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 RSPO4Q2I0M5 234 aaPredicted RBP8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 FOXD4L6Q3SYB3 417 aaPredicted RBP8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 MDH1BQ5I0G3 518 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 FOXD4L3Q6VB84 417 aaPredicted RBP8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 SYT13Q7L8C5 426 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 CEP57L1Q8IYX8 460 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 CPA6Q8N4T0 437 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 B3GALNT2Q8NCR0 500 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 OR6B3Q8NGW1 331 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms