RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 VSTM1Q6UX27 236 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 C4orf50Q6ZRC1 276 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 GUF1Q8N442 669 aaKnown RBP13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 MLKLQ8NB16 471 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 OR6B3Q8NGW1 331 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 CSGALNACT1Q8TDX6 532 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 SPATA17Q96L03 361 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 TSG101Q99816 390 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 B3GNT5Q9BYG0 378 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 ZNF518BQ9C0D4 1074 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 SNX25Q9H3E2 840 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 GKN1Q9NS71 199 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 RBM12Q9NTZ6 932 aaKnown RBP13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 TDP1Q9NUW8 608 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 C2orf42Q9NWW7 574 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 FBXO4Q9UKT5 387 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 C2orf78A6NCI8 922 aa13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 F8VP50 259 aa13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 CLDN5O00501 218 aa13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 NCAM2O15394 837 aa13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 LAMTOR5O43504 91 aa13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 AKAP3O75969 853 aa13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 DDX6P26196 483 aaKnown RBP eCLIP13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 HOXC13P31276 330 aa13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 AVPR1AP37288 418 aa13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 PRCPP42785 496 aa13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 KPNA1P52294 538 aaPredicted RBP13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 ZXDBP98169 803 aa13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 CSTF1Q05048 431 aaKnown RBP13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 BIRC3Q13489 604 aa13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 MAPRE1Q15691 268 aaKnown RBP13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 NFIL3Q16649 462 aa13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 TRIM68Q6AZZ1 485 aa13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 MAMSTRQ6ZN01 415 aa13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 RBM43Q6ZSC3 357 aaKnown RBP13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 PAQR9Q6ZVX9 377 aa13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 SV2AQ7L0J3 742 aa13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 RALGPS2Q86X27 583 aaPredicted RBP13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 SUMF1Q8NBK3 374 aa13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 B3GALNT2Q8NCR0 500 aa13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 TMC2Q8TDI7 906 aa13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 MRPS31Q92665 395 aaKnown RBP13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 TTLL2Q9BWV7 592 aa13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 C8orf33Q9H7E9 229 aaPredicted RBP13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 ZMYM5Q9UJ78 669 aa13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 ZNF638Q14966 1978 aaKnown RBP13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 CEP250Q9BV73 2442 aa13.52□□□□□ -0.25
SEC61A1-206ENST00000491668 SYCE3A1L190 88 aa13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 A8MXQ7 604 aa13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 CALUO43852 315 aaPredicted RBP13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 PHACTR2O75167 634 aa13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 ASS1P00966 412 aaKnown RBP13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 CCDC192P0DO97 292 aa13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 ARSAP15289 507 aa13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 GRIK1P39086 918 aa13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 AP3M2P53677 418 aa13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 MCCD1P59942 119 aaPredicted RBP13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 PLCB2Q00722 1185 aa13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 CCINQ13939 588 aa13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 ZNF268Q14587 947 aaPredicted RBP13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 ZNF77Q15935 545 aa13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 STX1AQ16623 288 aa13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 ZNF699Q32M78 642 aa13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 CEP135Q66GS9 1140 aa13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 NAIF1Q69YI7 327 aaPredicted RBP13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 SPOPLQ6IQ16 392 aa13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 SCARA5Q6ZMJ2 495 aa13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 Q6ZS52 159 aa13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 ADSSL1Q8N142 457 aa13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 ARL14EPQ8N8R7 260 aaPredicted RBP13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 ZBTB44Q8NCP5 570 aa13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 C8orf48Q96LL4 319 aa13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 EBF3Q9H4W6 596 aa13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 TRPC7Q9HCX4 862 aa13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 ANO10Q9NW15 660 aa13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 UXTQ9UBK9 157 aaPredicted RBP13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 HMGXB4Q9UGU5 601 aa13.51□□□□□ -0.25
SEC61A1-206ENST00000491668 BICDL2A1A5D9 508 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 ZNF840PA6NDX5 716 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 IKBKBO14920 756 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 MAPK13O15264 365 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 LILRB5O75023 590 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 LMNAP02545 664 aaKnown RBP13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 TRIM49P0CI25 452 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 TRIM49CP0CI26 452 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 BMP6P22004 513 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 NR2F2P24468 414 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 ASPAP45381 313 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 NOP14P78316 857 aaKnown RBP13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 PPP3CAQ08209 521 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 USP4Q13107 963 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 PAK1Q13153 545 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 ORC1Q13415 861 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 PON2Q15165 354 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 ITPRIPL2Q3MIP1 535 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 ZSCAN23Q3MJ62 389 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 COBLL1Q53SF7 1204 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 ZNF667Q5HYK9 610 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 DENND5BQ6ZUT9 1274 aa13.5□□□□□ -0.25
SEC61A1-206ENST00000491668 FUKQ8N0W3 1084 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms