RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 SYAP1Q96A49 352 aaPredicted RBP21.04■□□□□ 0.96
SREBF1-216ENST00000490796 SLC22A12Q96S37 553 aa21.04■□□□□ 0.96
SREBF1-216ENST00000490796 MRPL45Q9BRJ2 306 aaKnown RBP21.04■□□□□ 0.96
SREBF1-216ENST00000490796 NXF1Q9UBU9 619 aaKnown RBP21.04■□□□□ 0.96
SREBF1-216ENST00000490796 C2orf78A6NCI8 922 aa21.03■□□□□ 0.96
SREBF1-216ENST00000490796 A8MXQ7 604 aa21.03■□□□□ 0.96
SREBF1-216ENST00000490796 ABL1P00519 1130 aa21.03■□□□□ 0.96
SREBF1-216ENST00000490796 CCDC192P0DO97 292 aa21.03■□□□□ 0.96
SREBF1-216ENST00000490796 ATICP31939 592 aa21.03■□□□□ 0.96
SREBF1-216ENST00000490796 ATXN1P54253 815 aaKnown RBP21.03■□□□□ 0.96
SREBF1-216ENST00000490796 USP4Q13107 963 aa21.03■□□□□ 0.96
SREBF1-216ENST00000490796 PSMD2Q13200 908 aa21.03■□□□□ 0.96
SREBF1-216ENST00000490796 BIRC3Q13489 604 aa21.03■□□□□ 0.96
SREBF1-216ENST00000490796 KNOP1Q1ED39 458 aaKnown RBP21.03■□□□□ 0.96
SREBF1-216ENST00000490796 RESP18Q5W5W9 173 aa21.03■□□□□ 0.96
SREBF1-216ENST00000490796 RIN3Q8TB24 985 aa21.03■□□□□ 0.96
SREBF1-216ENST00000490796 CD101Q93033 1021 aa21.03■□□□□ 0.96
SREBF1-216ENST00000490796 RTKNQ9BST9 563 aa21.03■□□□□ 0.96
SREBF1-216ENST00000490796 GCNT4Q9P109 453 aa21.03■□□□□ 0.96
SREBF1-216ENST00000490796 ARHGAP26Q9UNA1 814 aa21.03■□□□□ 0.96
SREBF1-216ENST00000490796 ATG2BQ96BY7 2078 aa21.02■□□□□ 0.96
SREBF1-216ENST00000490796 F8VP50 259 aa21.02■□□□□ 0.96
SREBF1-216ENST00000490796 FOXD2O60548 495 aaPredicted RBP21.02■□□□□ 0.96
SREBF1-216ENST00000490796 NFATC1O95644 943 aa21.02■□□□□ 0.96
SREBF1-216ENST00000490796 PFKLP17858 780 aa21.02■□□□□ 0.96
SREBF1-216ENST00000490796 PTPN1P18031 435 aaKnown RBP21.02■□□□□ 0.96
SREBF1-216ENST00000490796 TGM1P22735 817 aa21.02■□□□□ 0.96
SREBF1-216ENST00000490796 PPP3CCP48454 512 aa21.02■□□□□ 0.96
SREBF1-216ENST00000490796 PXNP49023 591 aaPredicted RBP21.02■□□□□ 0.96
SREBF1-216ENST00000490796 CUL4BQ13620 913 aa21.02■□□□□ 0.96
SREBF1-216ENST00000490796 BMT2Q1RMZ1 405 aa21.02■□□□□ 0.96
SREBF1-216ENST00000490796 TDRD10Q5VZ19 366 aaKnown RBP21.02■□□□□ 0.96
SREBF1-216ENST00000490796 CCDC26Q8TAB7 109 aa21.02■□□□□ 0.96
SREBF1-216ENST00000490796 CHFRQ96EP1 664 aa21.02■□□□□ 0.96
SREBF1-216ENST00000490796 C8orf48Q96LL4 319 aa21.02■□□□□ 0.96
SREBF1-216ENST00000490796 ELOVL4Q9GZR5 314 aa21.02■□□□□ 0.96
SREBF1-216ENST00000490796 SEMA4GQ9NTN9 838 aa21.02■□□□□ 0.96
SREBF1-216ENST00000490796 EXOC1Q9NV70 894 aa21.02■□□□□ 0.96
SREBF1-216ENST00000490796 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.02■□□□□ 0.96
SREBF1-216ENST00000490796 ATP8B3O60423 1300 aa21.02■□□□□ 0.95
SREBF1-216ENST00000490796 OBSL1O75147 1896 aa21.01■□□□□ 0.95
SREBF1-216ENST00000490796 DNAH14Q0VDD8 3507 aa21.01■□□□□ 0.95
SREBF1-216ENST00000490796 CCDC163A0A0D9SF12 145 aa21.01■□□□□ 0.95
SREBF1-216ENST00000490796 RPP40O75818 363 aaKnown RBP21.01■□□□□ 0.95
SREBF1-216ENST00000490796 AP3M2P53677 418 aa21.01■□□□□ 0.95
SREBF1-216ENST00000490796 MYL6P60660 151 aa21.01■□□□□ 0.95
SREBF1-216ENST00000490796 EHHADHQ08426 723 aa21.01■□□□□ 0.95
SREBF1-216ENST00000490796 CSRP2Q16527 193 aa21.01■□□□□ 0.95
SREBF1-216ENST00000490796 EML3Q32P44 896 aa21.01■□□□□ 0.95
SREBF1-216ENST00000490796 PKN3Q6P5Z2 889 aa21.01■□□□□ 0.95
SREBF1-216ENST00000490796 CACNA2D4Q7Z3S7 1137 aa21.01■□□□□ 0.95
SREBF1-216ENST00000490796 C12orf56Q8IXR9 622 aa21.01■□□□□ 0.95
SREBF1-216ENST00000490796 CAMKK1Q8N5S9 505 aa21.01■□□□□ 0.95
SREBF1-216ENST00000490796 FAM160A2Q8N612 972 aaPredicted RBP21.01■□□□□ 0.95
SREBF1-216ENST00000490796 SPRYD3Q8NCJ5 442 aa21.01■□□□□ 0.95
SREBF1-216ENST00000490796 NETO1Q8TDF5 533 aa21.01■□□□□ 0.95
SREBF1-216ENST00000490796 SLITRK1Q96PX8 696 aa21.01■□□□□ 0.95
SREBF1-216ENST00000490796 FBRSL1Q9HCM7 1045 aaKnown RBP21.01■□□□□ 0.95
SREBF1-216ENST00000490796 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21■□□□□ 0.95
SREBF1-216ENST00000490796 STAU1O95793 577 aaKnown RBP21■□□□□ 0.95
SREBF1-216ENST00000490796 USP46P62068 366 aa21■□□□□ 0.95
SREBF1-216ENST00000490796 NOP14P78316 857 aaKnown RBP21■□□□□ 0.95
SREBF1-216ENST00000490796 IFRD2Q12894 506 aaPredicted RBP21■□□□□ 0.95
SREBF1-216ENST00000490796 ZNF699Q32M78 642 aa21■□□□□ 0.95
SREBF1-216ENST00000490796 GRAMD1CQ8IYS0 662 aa21■□□□□ 0.95
SREBF1-216ENST00000490796 RPLP0P6Q8NHW5 317 aa21■□□□□ 0.95
SREBF1-216ENST00000490796 GAB3Q8WWW8 586 aa21■□□□□ 0.95
SREBF1-216ENST00000490796 ACDQ96AP0 544 aa21■□□□□ 0.95
SREBF1-216ENST00000490796 TTLL2Q9BWV7 592 aa21■□□□□ 0.95
SREBF1-216ENST00000490796 SERTAD1Q9UHV2 236 aa21■□□□□ 0.95
SREBF1-216ENST00000490796 AXIN1O15169 862 aa20.99■□□□□ 0.95
SREBF1-216ENST00000490796 SLFN14P0C7P3 912 aa20.99■□□□□ 0.95
SREBF1-216ENST00000490796 TCF3P15923 654 aa20.99■□□□□ 0.95
SREBF1-216ENST00000490796 DNM1Q05193 864 aaKnown RBP20.99■□□□□ 0.95
SREBF1-216ENST00000490796 ZNF667Q5HYK9 610 aa20.99■□□□□ 0.95
SREBF1-216ENST00000490796 PRR23CQ6ZRP0 262 aa20.99■□□□□ 0.95
SREBF1-216ENST00000490796 B3GALNT2Q8NCR0 500 aa20.99■□□□□ 0.95
SREBF1-216ENST00000490796 ZNF516Q92618 1163 aa20.99■□□□□ 0.95
SREBF1-216ENST00000490796 MED10Q9BTT4 135 aa20.99■□□□□ 0.95
SREBF1-216ENST00000490796 LINC00597Q9H2U6 94 aa20.99■□□□□ 0.95
SREBF1-216ENST00000490796 DPEP3Q9H4B8 488 aa20.99■□□□□ 0.95
SREBF1-216ENST00000490796 RALGAPA1Q6GYQ0 2036 aa20.99■□□□□ 0.95
SREBF1-216ENST00000490796 DCDC2BA2VCK2 349 aa20.98■□□□□ 0.95
SREBF1-216ENST00000490796 ZNF840PA6NDX5 716 aa20.98■□□□□ 0.95
SREBF1-216ENST00000490796 LEFTY2O00292 366 aa20.98■□□□□ 0.95
SREBF1-216ENST00000490796 SLC9A3R1O14745 358 aaPredicted RBP20.98■□□□□ 0.95
SREBF1-216ENST00000490796 P4HA1P13674 534 aa20.98■□□□□ 0.95
SREBF1-216ENST00000490796 HOXC13P31276 330 aa20.98■□□□□ 0.95
SREBF1-216ENST00000490796 CASP4P49662 377 aa20.98■□□□□ 0.95
SREBF1-216ENST00000490796 TAF10Q12962 218 aa20.98■□□□□ 0.95
SREBF1-216ENST00000490796 NAIF1Q69YI7 327 aaPredicted RBP20.98■□□□□ 0.95
SREBF1-216ENST00000490796 TNIP3Q96KP6 325 aa20.98■□□□□ 0.95
SREBF1-216ENST00000490796 HHIPQ96QV1 700 aa20.98■□□□□ 0.95
SREBF1-216ENST00000490796 ZNF518BQ9C0D4 1074 aa20.98■□□□□ 0.95
SREBF1-216ENST00000490796 SMPD4Q9NXE4 827 aa20.98■□□□□ 0.95
SREBF1-216ENST00000490796 RCOR1Q9UKL0 485 aa20.98■□□□□ 0.95
SREBF1-216ENST00000490796 CLDN5O00501 218 aa20.97■□□□□ 0.95
SREBF1-216ENST00000490796 RTN3O95197 1032 aaPredicted RBP20.97■□□□□ 0.95
SREBF1-216ENST00000490796 YWHAQP27348 245 aa20.97■□□□□ 0.95
SREBF1-216ENST00000490796 SLC7A9P82251 487 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms