RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 CCDC34Q96HJ3 373 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 LRRC3BQ96PB8 259 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 MMS19Q96T76 1030 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 PKMYT1Q99640 499 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 SYT15Q9BQS2 421 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 SNX25Q9H3E2 840 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 KCTD10Q9H3F6 313 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 TMLHEQ9NVH6 421 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 SIX4Q9UIU6 781 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 SLC9A3R1O14745 358 aaPredicted RBP11.05□□□□□ -0.64
TTC28-207ENST00000490475 SMC2O95347 1197 aa11.05□□□□□ -0.64
TTC28-207ENST00000490475 NFATC1O95644 943 aa11.05□□□□□ -0.64
TTC28-207ENST00000490475 STAU1O95793 577 aaKnown RBP11.05□□□□□ -0.64
TTC28-207ENST00000490475 FNTBP49356 437 aa11.05□□□□□ -0.64
TTC28-207ENST00000490475 TNNC1P63316 161 aa11.05□□□□□ -0.64
TTC28-207ENST00000490475 TNK2Q07912 1038 aa11.05□□□□□ -0.64
TTC28-207ENST00000490475 TRPC3Q13507 836 aa11.05□□□□□ -0.64
TTC28-207ENST00000490475 PSMD6Q15008 389 aa11.05□□□□□ -0.64
TTC28-207ENST00000490475 CSRP2Q16527 193 aa11.05□□□□□ -0.64
TTC28-207ENST00000490475 CAMK4Q16566 473 aa11.05□□□□□ -0.64
TTC28-207ENST00000490475 LMBRD2Q68DH5 695 aaPredicted RBP11.05□□□□□ -0.64
TTC28-207ENST00000490475 DENND5BQ6ZUT9 1274 aa11.05□□□□□ -0.64
TTC28-207ENST00000490475 TRAPPC11Q7Z392 1133 aa11.05□□□□□ -0.64
TTC28-207ENST00000490475 DDX42Q86XP3 938 aaKnown RBP eCLIP11.05□□□□□ -0.64
TTC28-207ENST00000490475 SCN4BQ8IWT1 228 aa11.05□□□□□ -0.64
TTC28-207ENST00000490475 C12orf56Q8IXR9 622 aa11.05□□□□□ -0.64
TTC28-207ENST00000490475 ELOA2Q8IYF1 753 aaPredicted RBP11.05□□□□□ -0.64
TTC28-207ENST00000490475 SPATA20Q8TB22 786 aa11.05□□□□□ -0.64
TTC28-207ENST00000490475 SMARCE1Q969G3 411 aa11.05□□□□□ -0.64
TTC28-207ENST00000490475 SYAP1Q96A49 352 aaPredicted RBP11.05□□□□□ -0.64
TTC28-207ENST00000490475 GSDMAQ96QA5 445 aa11.05□□□□□ -0.64
TTC28-207ENST00000490475 CGRRF1Q99675 332 aa11.05□□□□□ -0.64
TTC28-207ENST00000490475 P2RY13Q9BPV8 354 aa11.05□□□□□ -0.64
TTC28-207ENST00000490475 EBF3Q9H4W6 596 aa11.05□□□□□ -0.64
TTC28-207ENST00000490475 RBM12Q9NTZ6 932 aaKnown RBP11.05□□□□□ -0.64
TTC28-207ENST00000490475 DUS2Q9NX74 493 aaKnown RBP11.05□□□□□ -0.64
TTC28-207ENST00000490475 TRPM5Q9NZQ8 1165 aa11.05□□□□□ -0.64
TTC28-207ENST00000490475 ARHGAP26Q9UNA1 814 aa11.05□□□□□ -0.64
TTC28-207ENST00000490475 ANAPC1Q9H1A4 1944 aa11.05□□□□□ -0.64
TTC28-207ENST00000490475 ATP8B3O60423 1300 aa11.05□□□□□ -0.64
TTC28-207ENST00000490475 GREB1Q4ZG55 1949 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 PDXKO00764 312 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 EXOC3O60645 756 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 DLATP10515 647 aaKnown RBP11.04□□□□□ -0.64
TTC28-207ENST00000490475 HDCP19113 662 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 ACAT1P24752 427 aaKnown RBP11.04□□□□□ -0.64
TTC28-207ENST00000490475 GNL1P36915 607 aaPredicted RBP11.04□□□□□ -0.64
TTC28-207ENST00000490475 GRIK1P39086 918 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 NOP14P78316 857 aaKnown RBP11.04□□□□□ -0.64
TTC28-207ENST00000490475 USP4Q13107 963 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 ZNF77Q15935 545 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 Q6ZS52 159 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 CACNA2D4Q7Z3S7 1137 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 C11orf74Q86VG3 221 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 GPIHBP1Q8IV16 184 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 GUF1Q8N442 669 aaKnown RBP11.04□□□□□ -0.64
TTC28-207ENST00000490475 PDZD8Q8NEN9 1154 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 OR5B17Q8NGF7 314 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 TTC8Q8TAM2 541 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 MYCBPAPQ8TBZ2 947 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 GAB3Q8WWW8 586 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 C8orf48Q96LL4 319 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 SLITRK1Q96PX8 696 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 ELOVL4Q9GZR5 314 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 SMG9Q9H0W8 520 aaKnown RBP11.04□□□□□ -0.64
TTC28-207ENST00000490475 ECT2Q9H8V3 914 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 TRPC7Q9HCX4 862 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 HPS4Q9NQG7 708 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 SEMA4GQ9NTN9 838 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 LMBRD1Q9NUN5 540 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 DMAC2Q9NW81 257 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 RMND1Q9NWS8 449 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 HOOK1Q9UJC3 728 aaKnown RBP11.04□□□□□ -0.64
TTC28-207ENST00000490475 CCL26Q9Y258 94 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 PCDHGA5Q9Y5G8 931 aa11.04□□□□□ -0.64
TTC28-207ENST00000490475 PTPRDP23468 1912 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 BIN1O00499 593 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 HRO43593 1189 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 RPP40O75818 363 aaKnown RBP11.03□□□□□ -0.64
TTC28-207ENST00000490475 RTN3O95197 1032 aaPredicted RBP11.03□□□□□ -0.64
TTC28-207ENST00000490475 KIF20AO95235 890 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 NR3C1P04150 777 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 CCDC192P0DO97 292 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 P4HA1P13674 534 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 TGM1P22735 817 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 GJA4P35212 333 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 PRCPP42785 496 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 CASP4P49662 377 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 GPR15P49685 360 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 ATXN1P54253 815 aaKnown RBP11.03□□□□□ -0.64
TTC28-207ENST00000490475 CYP27A1Q02318 531 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 CYP24A1Q07973 514 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 SPEM2Q0P670 501 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 WDR72Q3MJ13 1102 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 PREPLQ4J6C6 727 aaPredicted RBP11.03□□□□□ -0.64
TTC28-207ENST00000490475 ZNF658Q5TYW1 1059 aaPredicted RBP11.03□□□□□ -0.64
TTC28-207ENST00000490475 TDRD10Q5VZ19 366 aaKnown RBP11.03□□□□□ -0.64
TTC28-207ENST00000490475 HEATR6Q6AI08 1181 aaKnown RBP11.03□□□□□ -0.64
TTC28-207ENST00000490475 PRR23CQ6ZRP0 262 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 SYT13Q7L8C5 426 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms