RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 IFRD2Q12894 506 aaPredicted RBP19.26■□□□□ 0.67
COL9A3-214ENST00000490398 CLEC17AQ6ZS10 378 aa19.26■□□□□ 0.67
COL9A3-214ENST00000490398 UNC93AQ86WB7 457 aa19.26■□□□□ 0.67
COL9A3-214ENST00000490398 CCDC105Q8IYK2 499 aa19.26■□□□□ 0.67
COL9A3-214ENST00000490398 PJA1Q8NG27 643 aa19.26■□□□□ 0.67
COL9A3-214ENST00000490398 DNASE1L2Q92874 299 aa19.26■□□□□ 0.67
COL9A3-214ENST00000490398 IRF7Q92985 503 aa19.26■□□□□ 0.67
COL9A3-214ENST00000490398 TNIP3Q96KP6 325 aa19.26■□□□□ 0.67
COL9A3-214ENST00000490398 CEP63Q96MT8 703 aa19.26■□□□□ 0.67
COL9A3-214ENST00000490398 IMPG2Q9BZV3 1241 aa19.26■□□□□ 0.67
COL9A3-214ENST00000490398 KCNH6Q9H252 994 aa19.26■□□□□ 0.67
COL9A3-214ENST00000490398 CLSTN2Q9H4D0 955 aa19.26■□□□□ 0.67
COL9A3-214ENST00000490398 CYP3A43Q9HB55 503 aa19.26■□□□□ 0.67
COL9A3-214ENST00000490398 FAM86C1Q9NVL1 165 aa19.26■□□□□ 0.67
COL9A3-214ENST00000490398 GCNT4Q9P109 453 aa19.26■□□□□ 0.67
COL9A3-214ENST00000490398 COQ4Q9Y3A0 265 aa19.26■□□□□ 0.67
COL9A3-214ENST00000490398 OBSL1O75147 1896 aa19.25■□□□□ 0.67
COL9A3-214ENST00000490398 DPYSL4O14531 572 aa19.25■□□□□ 0.67
COL9A3-214ENST00000490398 TNFRSF10BO14763 440 aa19.25■□□□□ 0.67
COL9A3-214ENST00000490398 AP1G2O75843 785 aa19.25■□□□□ 0.67
COL9A3-214ENST00000490398 ADORA2BP29275 332 aa19.25■□□□□ 0.67
COL9A3-214ENST00000490398 ZXDBP98169 803 aa19.25■□□□□ 0.67
COL9A3-214ENST00000490398 TNK2Q07912 1038 aa19.25■□□□□ 0.67
COL9A3-214ENST00000490398 TAF10Q12962 218 aa19.25■□□□□ 0.67
COL9A3-214ENST00000490398 PAK1Q13153 545 aa19.25■□□□□ 0.67
COL9A3-214ENST00000490398 UBXN2BQ14CS0 331 aa19.25■□□□□ 0.67
COL9A3-214ENST00000490398 ZNF394Q53GI3 561 aa19.25■□□□□ 0.67
COL9A3-214ENST00000490398 FRMD5Q7Z6J6 570 aa19.25■□□□□ 0.67
COL9A3-214ENST00000490398 YAF2Q8IY57 180 aa19.25■□□□□ 0.67
COL9A3-214ENST00000490398 ZNF687Q8N1G0 1237 aa19.25■□□□□ 0.67
COL9A3-214ENST00000490398 ARL14EPQ8N8R7 260 aaPredicted RBP19.25■□□□□ 0.67
COL9A3-214ENST00000490398 DTWD2Q8NBA8 298 aa19.25■□□□□ 0.67
COL9A3-214ENST00000490398 SCAMP5Q8TAC9 235 aa19.25■□□□□ 0.67
COL9A3-214ENST00000490398 BPIFB1Q8TDL5 484 aa19.25■□□□□ 0.67
COL9A3-214ENST00000490398 E2F7Q96AV8 911 aa19.25■□□□□ 0.67
COL9A3-214ENST00000490398 FAM122AQ96E09 287 aa19.25■□□□□ 0.67
COL9A3-214ENST00000490398 LTB4R2Q9NPC1 389 aa19.25■□□□□ 0.67
COL9A3-214ENST00000490398 KRT82Q9NSB4 513 aa19.25■□□□□ 0.67
COL9A3-214ENST00000490398 UXTQ9UBK9 157 aaPredicted RBP19.25■□□□□ 0.67
COL9A3-214ENST00000490398 SIT1Q9Y3P8 196 aa19.25■□□□□ 0.67
COL9A3-214ENST00000490398 FAM170BA6NMN3 283 aa19.24■□□□□ 0.67
COL9A3-214ENST00000490398 CHADO15335 359 aa19.24■□□□□ 0.67
COL9A3-214ENST00000490398 STX10O60499 249 aa19.24■□□□□ 0.67
COL9A3-214ENST00000490398 DDX6P26196 483 aaKnown RBP eCLIP19.24■□□□□ 0.67
COL9A3-214ENST00000490398 AVPR1AP37288 418 aa19.24■□□□□ 0.67
COL9A3-214ENST00000490398 PPP1R2P41236 205 aa19.24■□□□□ 0.67
COL9A3-214ENST00000490398 FMO5P49326 533 aa19.24■□□□□ 0.67
COL9A3-214ENST00000490398 PGFP49763 221 aa19.24■□□□□ 0.67
COL9A3-214ENST00000490398 LRMPQ12912 555 aa19.24■□□□□ 0.67
COL9A3-214ENST00000490398 FZD5Q13467 585 aa19.24■□□□□ 0.67
COL9A3-214ENST00000490398 CCDC40Q4G0X9 1142 aa19.24■□□□□ 0.67
COL9A3-214ENST00000490398 TRIM68Q6AZZ1 485 aa19.24■□□□□ 0.67
COL9A3-214ENST00000490398 CELF5Q8N6W0 485 aaKnown RBP19.24■□□□□ 0.67
COL9A3-214ENST00000490398 SHDQ96IW2 340 aa19.24■□□□□ 0.67
COL9A3-214ENST00000490398 SRRTQ9BXP5 876 aaKnown RBP19.24■□□□□ 0.67
COL9A3-214ENST00000490398 TRPV5Q9NQA5 729 aa19.24■□□□□ 0.67
COL9A3-214ENST00000490398 CISHQ9NSE2 258 aa19.24■□□□□ 0.67
COL9A3-214ENST00000490398 TDP1Q9NUW8 608 aa19.24■□□□□ 0.67
COL9A3-214ENST00000490398 OBP2AQ9NY56 170 aa19.24■□□□□ 0.67
COL9A3-214ENST00000490398 GTSE1Q9NYZ3 720 aa19.24■□□□□ 0.67
COL9A3-214ENST00000490398 PIAS3Q9Y6X2 628 aa19.24■□□□□ 0.67
COL9A3-214ENST00000490398 NUP210Q8TEM1 1887 aaPredicted RBP19.24■□□□□ 0.67
COL9A3-214ENST00000490398 GREB1Q4ZG55 1949 aa19.23■□□□□ 0.67
COL9A3-214ENST00000490398 ZNF840PA6NDX5 716 aa19.23■□□□□ 0.67
COL9A3-214ENST00000490398 MAP3K7CLP57077 242 aa19.23■□□□□ 0.67
COL9A3-214ENST00000490398 WDR44Q5JSH3 913 aa19.23■□□□□ 0.67
COL9A3-214ENST00000490398 FOXR2Q6PJQ5 311 aa19.23■□□□□ 0.67
COL9A3-214ENST00000490398 TXNDC11Q6PKC3 985 aa19.23■□□□□ 0.67
COL9A3-214ENST00000490398 GPRIN1Q7Z2K8 1008 aa19.23■□□□□ 0.67
COL9A3-214ENST00000490398 NUP93Q8N1F7 819 aa19.23■□□□□ 0.67
COL9A3-214ENST00000490398 TRIML1Q8N9V2 468 aa19.23■□□□□ 0.67
COL9A3-214ENST00000490398 SMARCD1Q96GM5 515 aa19.23■□□□□ 0.67
COL9A3-214ENST00000490398 CEP295NLQ96MC4 621 aa19.23■□□□□ 0.67
COL9A3-214ENST00000490398 NT5C1AQ9BXI3 368 aa19.23■□□□□ 0.67
COL9A3-214ENST00000490398 RNF38Q9H0F5 515 aa19.23■□□□□ 0.67
COL9A3-214ENST00000490398 METTL14Q9HCE5 456 aaKnown RBP19.23■□□□□ 0.67
COL9A3-214ENST00000490398 GKN1Q9NS71 199 aa19.23■□□□□ 0.67
COL9A3-214ENST00000490398 DENND4CQ5VZ89 1909 aa19.22■□□□□ 0.67
COL9A3-214ENST00000490398 TICRRQ7Z2Z1 1910 aa19.22■□□□□ 0.67
COL9A3-214ENST00000490398 OTOL1A6NHN0 477 aaPredicted RBP19.22■□□□□ 0.67
COL9A3-214ENST00000490398 CKMP06732 381 aa19.22■□□□□ 0.67
COL9A3-214ENST00000490398 SLC5A3P53794 718 aa19.22■□□□□ 0.67
COL9A3-214ENST00000490398 RAD23BP54727 409 aa19.22■□□□□ 0.67
COL9A3-214ENST00000490398 PTPN5P54829 565 aa19.22■□□□□ 0.67
COL9A3-214ENST00000490398 ARHGAP29Q52LW3 1261 aa19.22■□□□□ 0.67
COL9A3-214ENST00000490398 CLEC20AQ6ZU45 233 aa19.22■□□□□ 0.67
COL9A3-214ENST00000490398 TRIM59Q8IWR1 403 aa19.22■□□□□ 0.67
COL9A3-214ENST00000490398 SLC4A11Q8NBS3 891 aa19.22■□□□□ 0.67
COL9A3-214ENST00000490398 CCDC150Q8NCX0 1101 aa19.22■□□□□ 0.67
COL9A3-214ENST00000490398 TTC16Q8NEE8 873 aa19.22■□□□□ 0.67
COL9A3-214ENST00000490398 KAT5Q92993 513 aa19.22■□□□□ 0.67
COL9A3-214ENST00000490398 JAKMIP2Q96AA8 810 aa19.22■□□□□ 0.67
COL9A3-214ENST00000490398 CYFIP2Q96F07 1278 aa19.22■□□□□ 0.67
COL9A3-214ENST00000490398 HNRNPABQ99729 332 aaKnown RBP19.22■□□□□ 0.67
COL9A3-214ENST00000490398 FAM83CQ9BQN1 747 aa19.22■□□□□ 0.67
COL9A3-214ENST00000490398 CSNK1G1Q9HCP0 422 aa19.22■□□□□ 0.67
COL9A3-214ENST00000490398 DMAP1Q9NPF5 467 aaPredicted RBP19.22■□□□□ 0.67
COL9A3-214ENST00000490398 HPS4Q9NQG7 708 aa19.22■□□□□ 0.67
COL9A3-214ENST00000490398 IL37Q9NZH6 218 aa19.22■□□□□ 0.67
COL9A3-214ENST00000490398 TRPM5Q9NZQ8 1165 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms