RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 ATP6V1G3Q96LB4 118 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 RNPC3Q96LT9 517 aaKnown RBP3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 ERGIC2Q96RQ1 377 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 CHP1Q99653 195 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 PHF20Q9BVI0 1012 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 NUP58Q9BVL2 599 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 SPATA9Q9BWV2 254 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 SSBP3Q9BWW4 388 aaPredicted RBP3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 BRIP1Q9BX63 1249 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 RTFDC1Q9BY42 306 aaPredicted RBP3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 CCDC113Q9H0I3 377 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 CSRNP2Q9H175 543 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 THAP9Q9H5L6 903 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 SH2D4AQ9H788 454 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 TDRD3Q9H7E2 651 aaKnown RBP3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 EBF2Q9HAK2 575 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 CD248Q9HCU0 757 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 KCNMB3Q9NPA1 279 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 PLCB1Q9NQ66 1216 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 BATF3Q9NR55 127 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 DLL4Q9NR61 685 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 ZNHIT6Q9NWK9 470 aaKnown RBP3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 RMND1Q9NWS8 449 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 DDX56Q9NY93 547 aaKnown RBP3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 RNF181Q9P0P0 153 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 LRP2BPQ9P2M1 347 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 ASH2LQ9UBL3 628 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 RNF14Q9UBS8 474 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 ODF2LQ9ULJ1 636 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 GUCA1BQ9UMX6 200 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 LUC7L2Q9Y383 392 aaKnown RBP3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 ATP6V0A2Q9Y487 856 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 HYOU1Q9Y4L1 999 aa3.74□□□□□ -1.81
CRNKL1-203ENST00000490258 ABCB11O95342 1321 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 TRIM75PA6NK02 468 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 KRTAP29-1A8MX34 341 aaPredicted RBP3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 H0YGN5 161 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 CES2O00748 559 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 ZNF213O14771 459 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 IFIT3O14879 490 aaKnown RBP3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 ZNF263O14978 683 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 PDPK1O15530 556 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 PRODHO43272 600 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 CREB3O43889 395 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 SRGAP2O75044 1071 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 TACC1O75410 805 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 DDNO94850 711 aaPredicted RBP3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 DEXIO95424 95 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 PLATP00750 562 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 S100BP04271 92 aaPredicted RBP3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 PARP1P09874 1014 aaKnown RBP3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 CYP2C8P10632 490 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 EZRP15311 586 aaKnown RBP3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 RPL13P26373 211 aaKnown RBP3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 CDC25AP30304 524 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 HOXA7P31268 230 aaPredicted RBP3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 HIBADHP31937 336 aaKnown RBP3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 CYLC1P35663 651 aaPredicted RBP3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 PPP1R2P41236 205 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 GMPSP49915 693 aaPredicted RBP3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 DNM2P50570 870 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 CCNG1P51959 295 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 RBM5P52756 815 aaKnown RBP eCLIP3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 GJA9P57773 515 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 NANOS3P60323 173 aaKnown RBP3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 ATP2C1P98194 919 aaPredicted RBP3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 SSRP1Q08945 709 aaKnown RBP3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 C2orf54Q08AI8 447 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 SMAD4Q13485 552 aaKnown RBP3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 BIRC3Q13489 604 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 BYSLQ13895 437 aaKnown RBP3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 FHL2Q14192 279 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 NPY5RQ15761 445 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 ASTE1Q2TB18 679 aaPredicted RBP3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 HSP90AA4PQ58FG1 418 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 CMPK2Q5EBM0 449 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 SPDYCQ5MJ68 293 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 AGBL2Q5U5Z8 902 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 STEAP3Q658P3 488 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 SPTY2D1Q68D10 685 aaPredicted RBP3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 CYP4F22Q6NT55 531 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 TTI2Q6NXR4 508 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 TEPPQ6URK8 271 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 USP49Q70CQ1 688 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 ZNF804AQ7Z570 1209 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 APBB1IPQ7Z5R6 666 aaPredicted RBP3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 IFT20Q8IY31 132 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 LRRC47Q8N1G4 583 aaKnown RBP3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 RNF10Q8N5U6 811 aaKnown RBP3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 TTLL6Q8N841 843 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 KYQ8NBH2 561 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 UHMK1Q8TAS1 419 aaKnown RBP3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 CAGE1Q8TC20 777 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 CCHCR1Q8TD31 782 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 HDAC7Q8WUI4 952 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 NELFBQ8WX92 580 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 ZCCHC14Q8WYQ9 949 aaKnown RBP3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 N4BP2L2Q92802 583 aaPredicted RBP3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 MKL1Q969V6 931 aa3.73□□□□□ -1.81
CRNKL1-203ENST00000490258 NSUN4Q96CB9 384 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms