RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 KMOO15229 486 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 ALOX15BO15296 676 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 RNMTO43148 476 aaKnown RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 AQP9O43315 295 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 XPOTO43592 962 aaKnown RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 PRDM1O75626 825 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 FARP2O94887 1054 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 FBXO21O94952 628 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 IL1BP01584 269 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 ATP5BP06576 529 aaKnown RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 FAM58BPP0C7Q3 252 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 ATP6V1B1P15313 513 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 ZNF23P17027 643 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 PLCG1P19174 1290 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 LMNB1P20700 586 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 HOXD10P28358 340 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 MZF1P28698 734 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 PMLP29590 882 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 PRDX6P30041 224 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 HOXC9P31274 260 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 RPA3P35244 121 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 HOXD13P35453 343 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 ALDH3B2P48448 385 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 HSD17B4P51659 736 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 CSE1LP55060 971 aaKnown RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 HADHBP55084 474 aaKnown RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 C21orf59P57076 290 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 NR1D2Q14995 579 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 ARHGEF6Q15052 776 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 SLC1A5Q15758 541 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 MAPK6Q16659 721 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 TRIM71Q2Q1W2 868 aaKnown RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 ANKDD1AQ495B1 522 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 HERC4Q5GLZ8 1057 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 EFHC1Q5JVL4 640 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 FAM209AQ5JX71 171 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 GJC2Q5T442 439 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 OGFRL1Q5TC84 451 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 DPY19L2P1Q6NXN4 242 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 FBXL19Q6PCT2 694 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 MPRIPQ6WCQ1 1025 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 BRINP3Q76B58 766 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 SV2BQ7L1I2 683 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 COPS6Q7L5N1 327 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 KRT27Q7Z3Y8 459 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 ITIH5Q86UX2 942 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 TMEM126BQ8IUX1 230 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 TRIM59Q8IWR1 403 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 RHOT2Q8IXI1 618 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 CCDC116Q8IYX3 515 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 IFNL3Q8IZI9 196 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 ZNF713Q8N859 430 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 C12orf50Q8NA57 414 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 SPERTQ8NA61 448 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 RBM15BQ8NDT2 890 aaKnown RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 OR7G1Q8NGA0 311 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 SLC30A5Q8TAD4 765 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 MORC4Q8TE76 937 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 CCDC127Q96BQ5 260 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 CCDC138Q96M89 665 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 GPR101Q96P66 508 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 CDK15Q96Q40 435 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 PLIN2Q99541 437 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 THTPAQ9BU02 230 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 FOXP3Q9BZS1 431 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 EHD1Q9H4M9 534 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 RNF41Q9H4P4 317 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 LRRC19Q9H756 370 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 MANSC1Q9H8J5 431 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 C10orf88Q9H8K7 445 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 KCNK13Q9HB14 408 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 ARHGEF4Q9NR80 690 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 VPS45Q9NRW7 570 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 TRNAU1APQ9NX07 287 aaKnown RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 KLHL3Q9UH77 587 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 TAGLN3Q9UI15 199 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 ADAMTS6Q9UKP5 1117 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 CDH7Q9ULB5 785 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 GRID1Q9ULK0 1009 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 B3GNT3Q9Y2A9 372 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 IFT52Q9Y366 437 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 DTNAQ9Y4J8 743 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 TACC3Q9Y6A5 838 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 FMN2Q9NZ56 1722 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 ATRNO75882 1429 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 SPATA31A3Q5VYP0 1347 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 AHDC1Q5TGY3 1603 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 SERTM1A2A2V5 107 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 TRIM64CA6NLI5 447 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 TBKBP1A7MCY6 615 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 PP2D1A8MPX8 630 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 CENPBD1B2RD01 187 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 K7EPI3 171 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 TRAF5O00463 557 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 TP73O15350 636 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 TYROBPO43914 113 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 CCNT2O60583 730 aaKnown RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 SULT1C4O75897 302 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 ZBTB11O95625 1053 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 PCCAP05165 728 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms