RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 XYLT2Q9H1B5 865 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 GANQ9H2C0 597 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 MMRN2Q9H8L6 949 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 BRD9Q9H8M2 597 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 ZNF334Q9HCZ1 680 aaPredicted RBP11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 TRPV5Q9NQA5 729 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 TMLHEQ9NVH6 421 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 AJAP1Q9UKB5 411 aaPredicted RBP11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 CDH9Q9ULB4 789 aa11.25□□□□□ -0.61
SCAMP4-208ENST00000489554 H0Y858 1186 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 RNF225M0QZC1 329 aaPredicted RBP11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 PHACTR2O75167 634 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 TACC1O75410 805 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 HLA-DRAP01903 254 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 CSH1P0DML2 217 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 CSH2P0DML3 217 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 WEE1P30291 646 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 TNNC1P63316 161 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 GRM2Q14416 872 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 GPR158Q5T848 1215 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 FAM171BQ6P995 826 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 TRIM65Q6PJ69 517 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 VITQ6UXI7 678 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 C4orf50Q6ZRC1 276 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 ZSCAN30Q86W11 494 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 MFSD6LQ8IWD5 586 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 YAF2Q8IY57 180 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 GIPC2Q8TF65 315 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 KBTBD7Q8WVZ9 684 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 NELL2Q99435 816 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 SYT15Q9BQS2 421 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 CRACR2AQ9BSW2 395 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 OSBPL6Q9BZF3 934 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 INTS2Q9H0H0 1204 aaKnown RBP11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 TASP1Q9H6P5 420 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 OBP2AQ9NY56 170 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 UXTQ9UBK9 157 aaPredicted RBP11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 GTF3C4Q9UKN8 822 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 ITIH6Q6UXX5 1313 aa11.24□□□□□ -0.61
SCAMP4-208ENST00000489554 PIEZO1Q92508 2521 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 SOBPA7XYQ1 873 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 HEPACAM2A8MVW5 462 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 ESPNB1AK53 854 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 DPYSL4O14531 572 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 ZNF263O14978 683 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 STX10O60499 249 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 DDX6P26196 483 aaKnown RBP eCLIP11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 GDI1P31150 447 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 VIPR2P41587 438 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 MAGEA9P43362 315 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 MAGEA11P43364 429 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 CDR1P51861 262 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 BIRC3Q13489 604 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 EXOC3L4Q17RC7 722 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 WDR72Q3MJ13 1102 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 FILIP1LQ4L180 1135 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 STXBP5Q5T5C0 1151 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 ZNF852Q6ZMS4 543 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 GBP6Q6ZN66 633 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 TPRG1Q6ZUI0 275 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 ALYREFQ86V81 257 aaKnown RBP11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 ARID3BQ8IVW6 561 aaPredicted RBP11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 EHBP1Q8NDI1 1231 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 FBXL13Q8NEE6 735 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 CEP295NLQ96MC4 621 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 NAA15Q9BXJ9 866 aaKnown RBP11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 FOXQ1Q9C009 403 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 SNX25Q9H3E2 840 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 VRTNQ9H8Y1 702 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 IL21Q9HBE4 155 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 APOBEC3GQ9HC16 384 aaKnown RBP11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 PLCB1Q9NQ66 1216 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 RAB20Q9NX57 234 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 GCNT4Q9P109 453 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 MRPS17Q9Y2R5 130 aaKnown RBP11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 CACNA1HO95180 2353 aa11.23□□□□□ -0.61
SCAMP4-208ENST00000489554 MYBPHLA2RUH7 354 aa11.22□□□□□ -0.61
SCAMP4-208ENST00000489554 PES1O00541 588 aaKnown RBP11.22□□□□□ -0.61
SCAMP4-208ENST00000489554 MAN2B1O00754 1011 aa11.22□□□□□ -0.61
SCAMP4-208ENST00000489554 CHADO15335 359 aa11.22□□□□□ -0.61
SCAMP4-208ENST00000489554 NCAM2O15394 837 aa11.22□□□□□ -0.61
SCAMP4-208ENST00000489554 HCRTO43612 131 aa11.22□□□□□ -0.61
SCAMP4-208ENST00000489554 ASS1P00966 412 aaKnown RBP11.22□□□□□ -0.61
SCAMP4-208ENST00000489554 F11P03951 625 aa11.22□□□□□ -0.61
SCAMP4-208ENST00000489554 GYPCP04921 128 aa11.22□□□□□ -0.61
SCAMP4-208ENST00000489554 DCNP07585 359 aaKnown RBP11.22□□□□□ -0.61
SCAMP4-208ENST00000489554 GLULP15104 373 aa11.22□□□□□ -0.61
SCAMP4-208ENST00000489554 HMGA1P17096 107 aaKnown RBP11.22□□□□□ -0.61
SCAMP4-208ENST00000489554 CYP2F1P24903 491 aa11.22□□□□□ -0.61
SCAMP4-208ENST00000489554 LMO2P25791 158 aa11.22□□□□□ -0.61
SCAMP4-208ENST00000489554 GNL1P36915 607 aaPredicted RBP11.22□□□□□ -0.61
SCAMP4-208ENST00000489554 GPR15P49685 360 aa11.22□□□□□ -0.61
SCAMP4-208ENST00000489554 MYL6P60660 151 aa11.22□□□□□ -0.61
SCAMP4-208ENST00000489554 CYP4F8P98187 520 aa11.22□□□□□ -0.61
SCAMP4-208ENST00000489554 FCHO2Q0JRZ9 810 aa11.22□□□□□ -0.61
SCAMP4-208ENST00000489554 NCOA4Q13772 614 aa11.22□□□□□ -0.61
SCAMP4-208ENST00000489554 UBXN2BQ14CS0 331 aa11.22□□□□□ -0.61
SCAMP4-208ENST00000489554 ANGPT1Q15389 498 aa11.22□□□□□ -0.61
SCAMP4-208ENST00000489554 DDR2Q16832 855 aa11.22□□□□□ -0.61
SCAMP4-208ENST00000489554 ZNF699Q32M78 642 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms