RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 PTK7Q13308 1070 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 MAMLD1Q13495 774 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 CASP8Q14790 479 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 SLMAPQ14BN4 828 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 ZBTB6Q15916 424 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 CYP1B1Q16678 543 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 KIZQ2M2Z5 673 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 GJC2Q5T442 439 aaPredicted RBP6.71□□□□□ -1.34
SF3A3-208ENST00000489537 LMBRD2Q68DH5 695 aaPredicted RBP6.71□□□□□ -1.34
SF3A3-208ENST00000489537 ARHGAP17Q68EM7 881 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 TWF2Q6IBS0 349 aaKnown RBP6.71□□□□□ -1.34
SF3A3-208ENST00000489537 DRICH1Q6PGQ1 229 aaPredicted RBP6.71□□□□□ -1.34
SF3A3-208ENST00000489537 LCLAT1Q6UWP7 414 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 RUFY4Q6ZNE9 571 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 SERINC5Q86VE9 423 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 SLC13A5Q86YT5 568 aaPredicted RBP6.71□□□□□ -1.34
SF3A3-208ENST00000489537 TOP6BLQ8N6T0 577 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 CCDC89Q8N998 374 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 ARRDC4Q8NCT1 418 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 APPL2Q8NEU8 664 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 OLIG1Q8TAK6 271 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 CPA5Q8WXQ8 436 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 SEC14L1Q92503 715 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 DPF3Q92784 378 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 ARHGEF26Q96DR7 871 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 HSFY1Q96LI6 401 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 HEXIM2Q96MH2 286 aaKnown RBP6.71□□□□□ -1.34
SF3A3-208ENST00000489537 UROC1Q96N76 676 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 TBCBQ99426 244 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 KRT12Q99456 494 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 FERMT1Q9BQL6 677 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 LRRC1Q9BTT6 524 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 STMN4Q9H169 189 aaPredicted RBP6.71□□□□□ -1.34
SF3A3-208ENST00000489537 SNX25Q9H3E2 840 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 LRRC19Q9H756 370 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 XPNPEP3Q9NQH7 507 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 RBM12Q9NTZ6 932 aaKnown RBP6.71□□□□□ -1.34
SF3A3-208ENST00000489537 FAM53CQ9NYF3 392 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 TAS2R14Q9NYV8 317 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 DSEQ9UL01 958 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.71□□□□□ -1.34
SF3A3-208ENST00000489537 NOD1Q9Y239 953 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 UMODL1Q5DID0 1318 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 CDH23Q9H251 3354 aa6.71□□□□□ -1.34
SF3A3-208ENST00000489537 GOLGA6BA6NDN3 693 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 TMEM191CA6NGB0 347 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 KPNA7A9QM74 516 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 ZNF487B1APH4 448 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 SPINT1O43278 529 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 ZNF623O75123 536 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 RPS6KA5O75582 802 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 ECEL1O95672 775 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 TFRCP02786 760 aaKnown RBP6.7□□□□□ -1.34
SF3A3-208ENST00000489537 IQCF3P0C7M6 154 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 ITGA4P13612 1032 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 ITIH2P19823 946 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 RRM1P23921 792 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 PCSK1P29120 753 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 HOXA11P31270 313 aaPredicted RBP6.7□□□□□ -1.34
SF3A3-208ENST00000489537 ZNF135P52742 658 aaPredicted RBP6.7□□□□□ -1.34
SF3A3-208ENST00000489537 BCAT1P54687 386 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 GUCY2DQ02846 1103 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 CBLBQ13191 982 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 HLTFQ14527 1009 aaKnown RBP eCLIP6.7□□□□□ -1.34
SF3A3-208ENST00000489537 SMC1AQ14683 1233 aaKnown RBP6.7□□□□□ -1.34
SF3A3-208ENST00000489537 NAA30Q147X3 362 aaPredicted RBP6.7□□□□□ -1.34
SF3A3-208ENST00000489537 MAPRE1Q15691 268 aaKnown RBP6.7□□□□□ -1.34
SF3A3-208ENST00000489537 CCNG2Q16589 344 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 BOLA3Q53S33 107 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 INTS6LQ5JSJ4 861 aaKnown RBP6.7□□□□□ -1.34
SF3A3-208ENST00000489537 ZBTB41Q5SVQ8 909 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 SPOPLQ6IQ16 392 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 LRIG3Q6UXM1 1119 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 ALKAL1Q6UXT8 129 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 C4orf22Q6V702 233 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 MMS22LQ6ZRQ5 1243 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 BZW1Q7L1Q6 419 aaKnown RBP6.7□□□□□ -1.34
SF3A3-208ENST00000489537 PCGF5Q86SE9 256 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 KLHL7Q8IXQ5 586 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 CCDC105Q8IYK2 499 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 CRYBG2Q8N1P7 616 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 LRRN4CLQ8ND94 238 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 ATL2Q8NHH9 583 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 AENQ8WTP8 325 aaKnown RBP6.7□□□□□ -1.34
SF3A3-208ENST00000489537 DNAJB3Q8WWF6 145 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 MAGOHBQ96A72 148 aaKnown RBP6.7□□□□□ -1.34
SF3A3-208ENST00000489537 HAUS1Q96CS2 278 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 CPB2Q96IY4 423 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 GLT1D1Q96MS3 346 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 PNKPQ96T60 521 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 PSMB7Q99436 277 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 OSMRQ99650 979 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 ARID3AQ99856 593 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 C11orf70Q9BRQ4 267 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 ERP44Q9BS26 406 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 FTHL17Q9BXU8 183 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 PPCSQ9HAB8 311 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 EPB41L5Q9HCM4 733 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 RRN3Q9NYV6 651 aa6.7□□□□□ -1.34
SF3A3-208ENST00000489537 KANSL3Q9P2N6 904 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms