RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 GBA2Q9HCG7 927 aaPredicted RBP4.55□□□□□ -1.68
RFC4-213ENST00000489028 A1CFQ9NQ94 594 aaKnown RBP4.55□□□□□ -1.68
RFC4-213ENST00000489028 DUSP22Q9NRW4 184 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 AFF4Q9UHB7 1163 aaKnown RBP4.55□□□□□ -1.68
RFC4-213ENST00000489028 SH2B3Q9UQQ2 575 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 FRMD4BQ9Y2L6 1034 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 PCDHGB6Q9Y5F9 930 aa4.55□□□□□ -1.68
RFC4-213ENST00000489028 GOLGA6CA6NDK9 693 aa4.54□□□□□ -1.68
RFC4-213ENST00000489028 GOLGA6BA6NDN3 693 aa4.54□□□□□ -1.68
RFC4-213ENST00000489028 MBD3L4A6NDZ8 208 aaPredicted RBP4.54□□□□□ -1.68
RFC4-213ENST00000489028 MBD3L3A6NE82 208 aaPredicted RBP4.54□□□□□ -1.68
RFC4-213ENST00000489028 PYCARD-AS1I3L0S3 204 aa4.54□□□□□ -1.68
RFC4-213ENST00000489028 GOLIM4O00461 696 aa4.54□□□□□ -1.68
RFC4-213ENST00000489028 PARNO95453 639 aaKnown RBP4.54□□□□□ -1.68
RFC4-213ENST00000489028 GOLGA6DP0CG33 693 aa4.54□□□□□ -1.68
RFC4-213ENST00000489028 PEX2P28328 305 aa4.54□□□□□ -1.68
RFC4-213ENST00000489028 CTGFP29279 349 aa4.54□□□□□ -1.68
RFC4-213ENST00000489028 ALDH9A1P49189 494 aa4.54□□□□□ -1.68
RFC4-213ENST00000489028 CACNB3P54284 484 aa4.54□□□□□ -1.68
RFC4-213ENST00000489028 SEMA5AQ13591 1074 aa4.54□□□□□ -1.68
RFC4-213ENST00000489028 POLD3Q15054 466 aaPredicted RBP4.54□□□□□ -1.68
RFC4-213ENST00000489028 CYP1B1Q16678 543 aa4.54□□□□□ -1.68
RFC4-213ENST00000489028 SLC9A4Q6AI14 798 aa4.54□□□□□ -1.68
RFC4-213ENST00000489028 ANKRD16Q6P6B7 361 aa4.54□□□□□ -1.68
RFC4-213ENST00000489028 DARS2Q6PI48 645 aaKnown RBP4.54□□□□□ -1.68
RFC4-213ENST00000489028 DPY19L3Q6ZPD9 716 aa4.54□□□□□ -1.68
RFC4-213ENST00000489028 OSCP1Q8WVF1 389 aa4.54□□□□□ -1.68
RFC4-213ENST00000489028 PPP2R3CQ969Q6 453 aa4.54□□□□□ -1.68
RFC4-213ENST00000489028 FSD1LQ9BXM9 530 aa4.54□□□□□ -1.68
RFC4-213ENST00000489028 GOLGA6AQ9NYA3 693 aa4.54□□□□□ -1.68
RFC4-213ENST00000489028 DNMT3BQ9UBC3 853 aaKnown RBP4.54□□□□□ -1.68
RFC4-213ENST00000489028 PADI4Q9UM07 663 aa4.54□□□□□ -1.68
RFC4-213ENST00000489028 CDY1Q9Y6F8 540 aa4.54□□□□□ -1.68
RFC4-213ENST00000489028 CGB1A6NKQ9 187 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 TARM1B6A8C7 271 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 H7C4K7 107 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 MAP4K4O95819 1239 aaPredicted RBP4.53□□□□□ -1.68
RFC4-213ENST00000489028 ONECUT2O95948 504 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 FAM163BP0C2L3 166 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 KLRC1P26715 233 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 PRKAG1P54619 331 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 PDE1AP54750 535 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 EEFSECP57772 596 aaKnown RBP4.53□□□□□ -1.68
RFC4-213ENST00000489028 FAM193AP78312 1265 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 CYP4F2P78329 520 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 FOXF2Q12947 444 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 AARS2Q5JTZ9 985 aaKnown RBP4.53□□□□□ -1.68
RFC4-213ENST00000489028 FCRLBQ6BAA4 426 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 Q6ZWC4 215 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 IZUMO1Q8IYV9 350 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 LRRC71Q8N4P6 559 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 DNAJB14Q8TBM8 379 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 XAGE5Q8WWM1 108 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 SPSB4Q96A44 273 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 C17orf80Q9BSJ5 609 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 APOL5Q9BWW9 433 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 STK31Q9BXU1 1019 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 LRRC27Q9C0I9 530 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 METTL14Q9HCE5 456 aaKnown RBP4.53□□□□□ -1.68
RFC4-213ENST00000489028 XPNPEP3Q9NQH7 507 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 PRDM11Q9NQV5 511 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 ADARB2Q9NS39 739 aaKnown RBP4.53□□□□□ -1.68
RFC4-213ENST00000489028 GABRQQ9UN88 632 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 ADAMTS5Q9UNA0 930 aa4.53□□□□□ -1.68
RFC4-213ENST00000489028 F8W8V4 182 aa4.52□□□□□ -1.69
RFC4-213ENST00000489028 MARCH6O60337 910 aa4.52□□□□□ -1.69
RFC4-213ENST00000489028 TJP3O95049 919 aa4.52□□□□□ -1.69
RFC4-213ENST00000489028 PDE8BO95263 885 aa4.52□□□□□ -1.69
RFC4-213ENST00000489028 ZKSCAN1P17029 563 aaPredicted RBP4.52□□□□□ -1.69
RFC4-213ENST00000489028 SATB1Q01826 763 aa4.52□□□□□ -1.69
RFC4-213ENST00000489028 NPY5RQ15761 445 aa4.52□□□□□ -1.69
RFC4-213ENST00000489028 TMEM119Q4V9L6 283 aa4.52□□□□□ -1.69
RFC4-213ENST00000489028 SLC44A4Q53GD3 710 aa4.52□□□□□ -1.69
RFC4-213ENST00000489028 PCID2Q5JVF3 399 aa4.52□□□□□ -1.69
RFC4-213ENST00000489028 FCRL6Q6DN72 434 aa4.52□□□□□ -1.69
RFC4-213ENST00000489028 NAPRTQ6XQN6 538 aa4.52□□□□□ -1.69
RFC4-213ENST00000489028 ZNF782Q6ZMW2 699 aaPredicted RBP4.52□□□□□ -1.69
RFC4-213ENST00000489028 PARS2Q7L3T8 475 aaKnown RBP4.52□□□□□ -1.69
RFC4-213ENST00000489028 WDR53Q7Z5U6 358 aaPredicted RBP4.52□□□□□ -1.69
RFC4-213ENST00000489028 CAND1Q86VP6 1230 aaKnown RBP4.52□□□□□ -1.69
RFC4-213ENST00000489028 TBC1D5Q92609 795 aa4.52□□□□□ -1.69
RFC4-213ENST00000489028 LENG8Q96PV6 779 aaPredicted RBP4.52□□□□□ -1.69
RFC4-213ENST00000489028 THAP7Q9BT49 309 aaPredicted RBP4.52□□□□□ -1.69
RFC4-213ENST00000489028 AS3MTQ9HBK9 375 aa4.52□□□□□ -1.69
RFC4-213ENST00000489028 ZNF287Q9HBT7 754 aa4.52□□□□□ -1.69
RFC4-213ENST00000489028 SH3BP4Q9P0V3 963 aa4.52□□□□□ -1.69
RFC4-213ENST00000489028 OGDHLQ9ULD0 1010 aa4.52□□□□□ -1.69
RFC4-213ENST00000489028 FER1L4A9Z1Z3 1794 aa4.52□□□□□ -1.69
RFC4-213ENST00000489028 LOC102723971A0A1B0GUV8 181 aa4.51□□□□□ -1.69
RFC4-213ENST00000489028 AGPSO00116 658 aa4.51□□□□□ -1.69
RFC4-213ENST00000489028 QSOX1O00391 747 aa4.51□□□□□ -1.69
RFC4-213ENST00000489028 RRP9O43818 475 aaKnown RBP4.51□□□□□ -1.69
RFC4-213ENST00000489028 MGEA5O60502 916 aa4.51□□□□□ -1.69
RFC4-213ENST00000489028 SRGAP2O75044 1071 aa4.51□□□□□ -1.69
RFC4-213ENST00000489028 PTDSS1P48651 473 aaKnown RBP4.51□□□□□ -1.69
RFC4-213ENST00000489028 ITGA8P53708 1063 aa4.51□□□□□ -1.69
RFC4-213ENST00000489028 TPTEP56180 551 aa4.51□□□□□ -1.69
RFC4-213ENST00000489028 E2F1Q01094 437 aa4.51□□□□□ -1.69
RFC4-213ENST00000489028 PROSER3Q2NL68 480 aa4.51□□□□□ -1.69
RFC4-213ENST00000489028 CERCAMQ5T4B2 595 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms