RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 THADAQ6YHU6 1953 aa19.68■□□□□ 0.74
HDAC6-231ENST00000488905 TRIM66O15016 1216 aa19.67■□□□□ 0.74
HDAC6-231ENST00000488905 NFATC1O95644 943 aa19.67■□□□□ 0.74
HDAC6-231ENST00000488905 PDGFRBP09619 1106 aa19.67■□□□□ 0.74
HDAC6-231ENST00000488905 DLATP10515 647 aaKnown RBP19.67■□□□□ 0.74
HDAC6-231ENST00000488905 PFKLP17858 780 aa19.67■□□□□ 0.74
HDAC6-231ENST00000488905 HDCP19113 662 aa19.67■□□□□ 0.74
HDAC6-231ENST00000488905 ANXA13P27216 316 aa19.67■□□□□ 0.74
HDAC6-231ENST00000488905 GRIK1P39086 918 aa19.67■□□□□ 0.74
HDAC6-231ENST00000488905 USP46P62068 366 aa19.67■□□□□ 0.74
HDAC6-231ENST00000488905 AMPD3Q01432 767 aa19.67■□□□□ 0.74
HDAC6-231ENST00000488905 SF3A2Q15428 464 aaKnown RBP19.67■□□□□ 0.74
HDAC6-231ENST00000488905 CCDC6Q16204 474 aa19.67■□□□□ 0.74
HDAC6-231ENST00000488905 MDH1BQ5I0G3 518 aa19.67■□□□□ 0.74
HDAC6-231ENST00000488905 CNNM4Q6P4Q7 775 aa19.67■□□□□ 0.74
HDAC6-231ENST00000488905 SYT13Q7L8C5 426 aa19.67■□□□□ 0.74
HDAC6-231ENST00000488905 MYCBPAPQ8TBZ2 947 aa19.67■□□□□ 0.74
HDAC6-231ENST00000488905 ZNF507Q8TCN5 953 aa19.67■□□□□ 0.74
HDAC6-231ENST00000488905 CGRRF1Q99675 332 aa19.67■□□□□ 0.74
HDAC6-231ENST00000488905 TTLL2Q9BWV7 592 aa19.67■□□□□ 0.74
HDAC6-231ENST00000488905 ABCA7Q8IZY2 2146 aa19.67■□□□□ 0.74
HDAC6-231ENST00000488905 TGFB1I1O43294 461 aa19.66■□□□□ 0.74
HDAC6-231ENST00000488905 TNNI1P19237 187 aa19.66■□□□□ 0.74
HDAC6-231ENST00000488905 CYP2J2P51589 502 aa19.66■□□□□ 0.74
HDAC6-231ENST00000488905 LIMK1P53667 647 aa19.66■□□□□ 0.74
HDAC6-231ENST00000488905 CYP24A1Q07973 514 aa19.66■□□□□ 0.74
HDAC6-231ENST00000488905 NR1H3Q13133 447 aa19.66■□□□□ 0.74
HDAC6-231ENST00000488905 IQUBQ8NA54 791 aa19.66■□□□□ 0.74
HDAC6-231ENST00000488905 C12orf50Q8NA57 414 aaPredicted RBP19.66■□□□□ 0.74
HDAC6-231ENST00000488905 RDH13Q8NBN7 331 aa19.66■□□□□ 0.74
HDAC6-231ENST00000488905 FNBP1Q96RU3 617 aa19.66■□□□□ 0.74
HDAC6-231ENST00000488905 MRPL45Q9BRJ2 306 aaKnown RBP19.66■□□□□ 0.74
HDAC6-231ENST00000488905 SNX25Q9H3E2 840 aa19.66■□□□□ 0.74
HDAC6-231ENST00000488905 EHD2Q9NZN4 543 aa19.66■□□□□ 0.74
HDAC6-231ENST00000488905 TRPM5Q9NZQ8 1165 aa19.66■□□□□ 0.74
HDAC6-231ENST00000488905 NME7Q9Y5B8 376 aa19.66■□□□□ 0.74
HDAC6-231ENST00000488905 MYO18AQ92614 2054 aaKnown RBP19.65■□□□□ 0.74
HDAC6-231ENST00000488905 F8VP50 259 aa19.65■□□□□ 0.74
HDAC6-231ENST00000488905 CUTAO60888 179 aa19.65■□□□□ 0.74
HDAC6-231ENST00000488905 TACC1O75410 805 aa19.65■□□□□ 0.74
HDAC6-231ENST00000488905 YEATS4O95619 227 aa19.65■□□□□ 0.74
HDAC6-231ENST00000488905 APBB3O95704 486 aa19.65■□□□□ 0.74
HDAC6-231ENST00000488905 ZNF806P0C7X5 589 aa19.65■□□□□ 0.74
HDAC6-231ENST00000488905 NOP14P78316 857 aaKnown RBP19.65■□□□□ 0.74
HDAC6-231ENST00000488905 ZXDBP98169 803 aa19.65■□□□□ 0.74
HDAC6-231ENST00000488905 PSMD2Q13200 908 aa19.65■□□□□ 0.74
HDAC6-231ENST00000488905 DMC1Q14565 340 aa19.65■□□□□ 0.74
HDAC6-231ENST00000488905 PSMD6Q15008 389 aa19.65■□□□□ 0.74
HDAC6-231ENST00000488905 SHC4Q6S5L8 630 aa19.65■□□□□ 0.74
HDAC6-231ENST00000488905 NELFCDQ8IXH7 590 aa19.65■□□□□ 0.74
HDAC6-231ENST00000488905 ZC3H10Q96K80 434 aaKnown RBP19.65■□□□□ 0.74
HDAC6-231ENST00000488905 ZNF396Q96N95 335 aaPredicted RBP19.65■□□□□ 0.74
HDAC6-231ENST00000488905 LINC00597Q9H2U6 94 aa19.65■□□□□ 0.74
HDAC6-231ENST00000488905 MAGEF1Q9HAY2 307 aa19.65■□□□□ 0.74
HDAC6-231ENST00000488905 TFIP11Q9UBB9 837 aaKnown RBP19.65■□□□□ 0.74
HDAC6-231ENST00000488905 PCDHGA5Q9Y5G8 931 aa19.65■□□□□ 0.74
HDAC6-231ENST00000488905 LEFTY2O00292 366 aa19.64■□□□□ 0.73
HDAC6-231ENST00000488905 CLIC2O15247 247 aa19.64■□□□□ 0.73
HDAC6-231ENST00000488905 CST3P01034 146 aaPredicted RBP19.64■□□□□ 0.73
HDAC6-231ENST00000488905 GNL1P36915 607 aaPredicted RBP19.64■□□□□ 0.73
HDAC6-231ENST00000488905 MPLP40238 635 aa19.64■□□□□ 0.73
HDAC6-231ENST00000488905 TNNC1P63316 161 aa19.64■□□□□ 0.73
HDAC6-231ENST00000488905 EHHADHQ08426 723 aa19.64■□□□□ 0.73
HDAC6-231ENST00000488905 PLK5Q496M5 336 aa19.64■□□□□ 0.73
HDAC6-231ENST00000488905 PLA2G2CQ5R387 149 aa19.64■□□□□ 0.73
HDAC6-231ENST00000488905 IL31Q6EBC2 164 aa19.64■□□□□ 0.73
HDAC6-231ENST00000488905 UNC13DQ70J99 1090 aa19.64■□□□□ 0.73
HDAC6-231ENST00000488905 HS2ST1Q7LGA3 356 aa19.64■□□□□ 0.73
HDAC6-231ENST00000488905 XXYLT1Q8NBI6 393 aa19.64■□□□□ 0.73
HDAC6-231ENST00000488905 OR6B3Q8NGW1 331 aa19.64■□□□□ 0.73
HDAC6-231ENST00000488905 SCFD1Q8WVM8 642 aa19.64■□□□□ 0.73
HDAC6-231ENST00000488905 DDX1Q92499 740 aaKnown RBP19.64■□□□□ 0.73
HDAC6-231ENST00000488905 CCDC127Q96BQ5 260 aa19.64■□□□□ 0.73
HDAC6-231ENST00000488905 C8orf48Q96LL4 319 aa19.64■□□□□ 0.73
HDAC6-231ENST00000488905 C7orf25Q9BPX7 421 aa19.64■□□□□ 0.73
HDAC6-231ENST00000488905 ELOVL4Q9GZR5 314 aa19.64■□□□□ 0.73
HDAC6-231ENST00000488905 DPEP3Q9H4B8 488 aa19.64■□□□□ 0.73
HDAC6-231ENST00000488905 EBF1Q9UH73 591 aa19.64■□□□□ 0.73
HDAC6-231ENST00000488905 PLXND1Q9Y4D7 1925 aa19.64■□□□□ 0.73
HDAC6-231ENST00000488905 ZNF840PA6NDX5 716 aa19.63■□□□□ 0.73
HDAC6-231ENST00000488905 OLFM2O95897 454 aa19.63■□□□□ 0.73
HDAC6-231ENST00000488905 OPRD1P41143 372 aa19.63■□□□□ 0.73
HDAC6-231ENST00000488905 PPP3CCP48454 512 aa19.63■□□□□ 0.73
HDAC6-231ENST00000488905 CACNA2D1P54289 1103 aa19.63■□□□□ 0.73
HDAC6-231ENST00000488905 SNRPFP62306 86 aaKnown RBP19.63■□□□□ 0.73
HDAC6-231ENST00000488905 SLC7A9P82251 487 aa19.63■□□□□ 0.73
HDAC6-231ENST00000488905 WDR72Q3MJ13 1102 aa19.63■□□□□ 0.73
HDAC6-231ENST00000488905 CCDC26Q8TAB7 109 aa19.63■□□□□ 0.73
HDAC6-231ENST00000488905 GZF1Q9H116 711 aaPredicted RBP19.63■□□□□ 0.73
HDAC6-231ENST00000488905 RXFP3Q9NSD7 469 aa19.63■□□□□ 0.73
HDAC6-231ENST00000488905 TMEM30AQ9NV96 361 aa19.63■□□□□ 0.73
HDAC6-231ENST00000488905 USP24Q9UPU5 2620 aa19.62■□□□□ 0.73
HDAC6-231ENST00000488905 STAU1O95793 577 aaKnown RBP19.62■□□□□ 0.73
HDAC6-231ENST00000488905 OAS1P00973 400 aaKnown RBP19.62■□□□□ 0.73
HDAC6-231ENST00000488905 CYP17A1P05093 508 aa19.62■□□□□ 0.73
HDAC6-231ENST00000488905 FAM163BP0C2L3 166 aa19.62■□□□□ 0.73
HDAC6-231ENST00000488905 PTPN1P18031 435 aaKnown RBP19.62■□□□□ 0.73
HDAC6-231ENST00000488905 KCNA4P22459 653 aa19.62■□□□□ 0.73
HDAC6-231ENST00000488905 CASP1P29466 404 aa19.62■□□□□ 0.73
HDAC6-231ENST00000488905 ELF2Q15723 593 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms