RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 RWDD2AQ9UIY3 292 aa16.94■□□□□ 0.3
CTDSP1-209ENST00000488627 CCL26Q9Y258 94 aa16.94■□□□□ 0.3
CTDSP1-209ENST00000488627 ZNF263O14978 683 aa16.93■□□□□ 0.3
CTDSP1-209ENST00000488627 CHADO15335 359 aa16.93■□□□□ 0.3
CTDSP1-209ENST00000488627 BEST1O76090 585 aa16.93■□□□□ 0.3
CTDSP1-209ENST00000488627 CD58P19256 250 aa16.93■□□□□ 0.3
CTDSP1-209ENST00000488627 NUBP1P53384 320 aa16.93■□□□□ 0.3
CTDSP1-209ENST00000488627 CCDC40Q4G0X9 1142 aa16.93■□□□□ 0.3
CTDSP1-209ENST00000488627 WDR44Q5JSH3 913 aa16.93■□□□□ 0.3
CTDSP1-209ENST00000488627 CELF5Q8N6W0 485 aaKnown RBP16.93■□□□□ 0.3
CTDSP1-209ENST00000488627 RIN3Q8TB24 985 aa16.93■□□□□ 0.3
CTDSP1-209ENST00000488627 IRF7Q92985 503 aa16.93■□□□□ 0.3
CTDSP1-209ENST00000488627 SMARCD1Q96GM5 515 aa16.93■□□□□ 0.3
CTDSP1-209ENST00000488627 SHDQ96IW2 340 aa16.93■□□□□ 0.3
CTDSP1-209ENST00000488627 CYP2S1Q96SQ9 504 aa16.93■□□□□ 0.3
CTDSP1-209ENST00000488627 HNRNPABQ99729 332 aaKnown RBP16.93■□□□□ 0.3
CTDSP1-209ENST00000488627 HEBP1Q9NRV9 189 aa16.93■□□□□ 0.3
CTDSP1-209ENST00000488627 FAM49BQ9NUQ9 324 aa16.93■□□□□ 0.3
CTDSP1-209ENST00000488627 DLGAP2Q9P1A6 1054 aa16.93■□□□□ 0.3
CTDSP1-209ENST00000488627 MUC6Q6W4X9 2439 aa16.92■□□□□ 0.3
CTDSP1-209ENST00000488627 C2orf78A6NCI8 922 aa16.92■□□□□ 0.3
CTDSP1-209ENST00000488627 ZNF840PA6NDX5 716 aa16.92■□□□□ 0.3
CTDSP1-209ENST00000488627 AP1G2O75843 785 aa16.92■□□□□ 0.3
CTDSP1-209ENST00000488627 GNA14O95837 355 aa16.92■□□□□ 0.3
CTDSP1-209ENST00000488627 TCF15Q12870 199 aa16.92■□□□□ 0.3
CTDSP1-209ENST00000488627 ZNF268Q14587 947 aaPredicted RBP16.92■□□□□ 0.3
CTDSP1-209ENST00000488627 IRF2BP1Q8IU81 584 aa16.92■□□□□ 0.3
CTDSP1-209ENST00000488627 NUP93Q8N1F7 819 aa16.92■□□□□ 0.3
CTDSP1-209ENST00000488627 SCAMP5Q8TAC9 235 aa16.92■□□□□ 0.3
CTDSP1-209ENST00000488627 GPT2Q8TD30 523 aa16.92■□□□□ 0.3
CTDSP1-209ENST00000488627 BPIFB1Q8TDL5 484 aa16.92■□□□□ 0.3
CTDSP1-209ENST00000488627 CYFIP2Q96F07 1278 aa16.92■□□□□ 0.3
CTDSP1-209ENST00000488627 MED10Q9BTT4 135 aa16.92■□□□□ 0.3
CTDSP1-209ENST00000488627 FOXQ1Q9C009 403 aa16.92■□□□□ 0.3
CTDSP1-209ENST00000488627 NUP62CLQ9H1M0 184 aa16.92■□□□□ 0.3
CTDSP1-209ENST00000488627 FAM124BQ9H5Z6 455 aaPredicted RBP16.92■□□□□ 0.3
CTDSP1-209ENST00000488627 DMAP1Q9NPF5 467 aaPredicted RBP16.92■□□□□ 0.3
CTDSP1-209ENST00000488627 KRT82Q9NSB4 513 aa16.92■□□□□ 0.3
CTDSP1-209ENST00000488627 CISHQ9NSE2 258 aa16.92■□□□□ 0.3
CTDSP1-209ENST00000488627 TDP1Q9NUW8 608 aa16.92■□□□□ 0.3
CTDSP1-209ENST00000488627 MTF2Q9Y483 593 aaPredicted RBP16.92■□□□□ 0.3
CTDSP1-209ENST00000488627 WDFY4Q6ZS81 3184 aa16.92■□□□□ 0.3
CTDSP1-209ENST00000488627 KANSL1LA0AUZ9 987 aa16.91■□□□□ 0.3
CTDSP1-209ENST00000488627 FAM92AA1XBS5 289 aa16.91■□□□□ 0.3
CTDSP1-209ENST00000488627 STK25O00506 426 aa16.91■□□□□ 0.3
CTDSP1-209ENST00000488627 DPYSL4O14531 572 aa16.91■□□□□ 0.3
CTDSP1-209ENST00000488627 P4HA2O15460 535 aa16.91■□□□□ 0.3
CTDSP1-209ENST00000488627 GLULP15104 373 aa16.91■□□□□ 0.3
CTDSP1-209ENST00000488627 CD72P21854 359 aa16.91■□□□□ 0.3
CTDSP1-209ENST00000488627 AVPR1AP37288 418 aa16.91■□□□□ 0.3
CTDSP1-209ENST00000488627 RAD23BP54727 409 aa16.91■□□□□ 0.3
CTDSP1-209ENST00000488627 TAF10Q12962 218 aa16.91■□□□□ 0.3
CTDSP1-209ENST00000488627 CUL2Q13617 745 aa16.91■□□□□ 0.3
CTDSP1-209ENST00000488627 ZNF394Q53GI3 561 aa16.91■□□□□ 0.3
CTDSP1-209ENST00000488627 ZNF687Q8N1G0 1237 aa16.91■□□□□ 0.3
CTDSP1-209ENST00000488627 TTC39CQ8N584 583 aa16.91■□□□□ 0.3
CTDSP1-209ENST00000488627 UBR7Q8N806 425 aa16.91■□□□□ 0.3
CTDSP1-209ENST00000488627 ARL14EPQ8N8R7 260 aaPredicted RBP16.91■□□□□ 0.3
CTDSP1-209ENST00000488627 SLC4A11Q8NBS3 891 aa16.91■□□□□ 0.3
CTDSP1-209ENST00000488627 ZFYVE19Q96K21 471 aa16.91■□□□□ 0.3
CTDSP1-209ENST00000488627 GBP4Q96PP9 640 aa16.91■□□□□ 0.3
CTDSP1-209ENST00000488627 EHD2Q9NZN4 543 aa16.91■□□□□ 0.3
CTDSP1-209ENST00000488627 SIT1Q9Y3P8 196 aa16.91■□□□□ 0.3
CTDSP1-209ENST00000488627 ATP8B3O60423 1300 aa16.91■□□□□ 0.3
CTDSP1-209ENST00000488627 HHLA1C9JL84 531 aa16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 GALR2O43603 387 aaPredicted RBP16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 RTN3O95197 1032 aaPredicted RBP16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 YWHAQP27348 245 aa16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 ADORA2BP29275 332 aa16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 PPP3CCP48454 512 aa16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 SLC5A3P53794 718 aa16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 MLLT6P55198 1093 aaPredicted RBP16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 MAP3K7CLP57077 242 aa16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 ZXDBP98169 803 aa16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 KCNH2Q12809 1159 aa16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 FZD5Q13467 585 aa16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 DPCR1Q3MIW9 517 aa16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 ARHGAP29Q52LW3 1261 aa16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 PPP1R26Q5T8A7 1209 aaPredicted RBP16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 CLEC20AQ6ZU45 233 aa16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 TPRG1Q6ZUI0 275 aa16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 YAF2Q8IY57 180 aa16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 CCDC105Q8IYK2 499 aa16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 PJA1Q8NG27 643 aa16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 TMEM176AQ96HP8 235 aa16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 PRRX2Q99811 253 aa16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 FAM83CQ9BQN1 747 aa16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 TRPC7Q9HCX4 862 aa16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 LTB4R2Q9NPC1 389 aa16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 COMMD8Q9NX08 183 aa16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 TRPM5Q9NZQ8 1165 aa16.9■□□□□ 0.3
CTDSP1-209ENST00000488627 F5P12259 2224 aa16.89■□□□□ 0.29
CTDSP1-209ENST00000488627 COL4A3Q01955 1670 aa16.89■□□□□ 0.29
CTDSP1-209ENST00000488627 TRAV19A0A0A6YYK7 116 aa16.89■□□□□ 0.29
CTDSP1-209ENST00000488627 FGFR1OPO95684 399 aaKnown RBP16.89■□□□□ 0.29
CTDSP1-209ENST00000488627 OLFM2O95897 454 aa16.89■□□□□ 0.29
CTDSP1-209ENST00000488627 OAS1P00973 400 aaKnown RBP16.89■□□□□ 0.29
CTDSP1-209ENST00000488627 DCNP07585 359 aaKnown RBP16.89■□□□□ 0.29
CTDSP1-209ENST00000488627 USP17L7P0C7H9 530 aa16.89■□□□□ 0.29
CTDSP1-209ENST00000488627 FAM200BP0CF97 657 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms