RNA–Protein interactions for RNA: ENST00000488298.5

COL1A2-210, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-210ENST00000488298 RBM43Q6ZSC3 357 aaKnown RBP12.87□□□□□ -0.35
COL1A2-210ENST00000488298 SHKBP1Q8TBC3 707 aa12.87□□□□□ -0.35
COL1A2-210ENST00000488298 NELFBQ8WX92 580 aa12.87□□□□□ -0.35
COL1A2-210ENST00000488298 TAF4BQ92750 862 aa12.87□□□□□ -0.35
COL1A2-210ENST00000488298 PSMG2Q969U7 264 aa12.87□□□□□ -0.35
COL1A2-210ENST00000488298 CEP63Q96MT8 703 aa12.87□□□□□ -0.35
COL1A2-210ENST00000488298 LPIN3Q9BQK8 851 aa12.87□□□□□ -0.35
COL1A2-210ENST00000488298 RTKNQ9BST9 563 aa12.87□□□□□ -0.35
COL1A2-210ENST00000488298 IL21Q9HBE4 155 aa12.87□□□□□ -0.35
COL1A2-210ENST00000488298 TMEM8AQ9HCN3 771 aa12.87□□□□□ -0.35
COL1A2-210ENST00000488298 ABCB6Q9NP58 842 aa12.87□□□□□ -0.35
COL1A2-210ENST00000488298 TMEM30AQ9NV96 361 aa12.87□□□□□ -0.35
COL1A2-210ENST00000488298 CDH9Q9ULB4 789 aa12.87□□□□□ -0.35
COL1A2-210ENST00000488298 MYH10P35580 1976 aa12.87□□□□□ -0.35
COL1A2-210ENST00000488298 CEP250Q9BV73 2442 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 A0A1W2PRU2 124 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 PMM2O15305 246 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 HMGA1P17096 107 aaKnown RBP12.86□□□□□ -0.35
COL1A2-210ENST00000488298 ALDH1A3P47895 512 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 KPNA1P52294 538 aaPredicted RBP12.86□□□□□ -0.35
COL1A2-210ENST00000488298 MYL7Q01449 175 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 SPEM2Q0P670 501 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 TRPC3Q13507 836 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 ZNF699Q32M78 642 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 CBWD6Q4V339 395 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 CBWD3Q5JTY5 395 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 CBWD5Q5RIA9 395 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 LAIR1Q6GTX8 287 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 C1orf228Q6PIY5 440 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 PRR23BQ6ZRT6 265 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 PAQR9Q6ZVX9 377 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 GAREM2Q75VX8 874 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 TMEM150AQ86TG1 271 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 IRF2BP1Q8IU81 584 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 DCP1BQ8IZD4 617 aaKnown RBP12.86□□□□□ -0.35
COL1A2-210ENST00000488298 MSANTD3Q96H12 275 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 TSG101Q99816 390 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 SYT15Q9BQS2 421 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 PI4K2AQ9BTU6 479 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 DPEP3Q9H4B8 488 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 C8orf33Q9H7E9 229 aaPredicted RBP12.86□□□□□ -0.35
COL1A2-210ENST00000488298 PARD6AQ9NPB6 346 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 ASB3Q9Y575 518 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 PCDHB5Q9Y5E4 795 aa12.86□□□□□ -0.35
COL1A2-210ENST00000488298 DCDC2BA2VCK2 349 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 TULP1O00294 542 aaPredicted RBP12.85□□□□□ -0.35
COL1A2-210ENST00000488298 ARNTLO00327 626 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 CHADO15335 359 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 PHACTR2O75167 634 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 RETP07949 1114 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 PDGFRBP09619 1106 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 EPB41P11171 864 aaKnown RBP12.85□□□□□ -0.35
COL1A2-210ENST00000488298 KRT13P13646 458 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 CYP2F1P24903 491 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 PCSK1P29120 753 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 GNL1P36915 607 aaPredicted RBP12.85□□□□□ -0.35
COL1A2-210ENST00000488298 MAGEA11P43364 429 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 TUFMP49411 452 aaKnown RBP12.85□□□□□ -0.35
COL1A2-210ENST00000488298 GPR15P49685 360 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 TSPY1Q01534 308 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 SATB1Q01826 763 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 INCA1Q0VD86 236 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 BIRC3Q13489 604 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 LRRC32Q14392 662 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 GAS6Q14393 721 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 NFE2Q16621 373 aaPredicted RBP12.85□□□□□ -0.35
COL1A2-210ENST00000488298 ZNF667Q5HYK9 610 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 KRT39Q6A163 491 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 DNAJB7Q7Z6W7 309 aaPredicted RBP12.85□□□□□ -0.35
COL1A2-210ENST00000488298 GPIHBP1Q8IV16 184 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 ARID3BQ8IVW6 561 aaPredicted RBP12.85□□□□□ -0.35
COL1A2-210ENST00000488298 TRIM59Q8IWR1 403 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 SPEM1Q8N4L4 309 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 LMO3Q8TAP4 145 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 MYCBPAPQ8TBZ2 947 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 WHAMMQ8TF30 809 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 FUBP3Q96I24 572 aaKnown RBP eCLIP12.85□□□□□ -0.35
COL1A2-210ENST00000488298 CNTNAP3BQ96NU0 1288 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 MMS19Q96T76 1030 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 CNTNAP3Q9BZ76 1288 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 NXF1Q9UBU9 619 aaKnown RBP12.85□□□□□ -0.35
COL1A2-210ENST00000488298 HMGXB4Q9UGU5 601 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 CTNND2Q9UQB3 1225 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 HELZP42694 1942 aaKnown RBP12.85□□□□□ -0.35
COL1A2-210ENST00000488298 NCANO14594 1321 aa12.85□□□□□ -0.35
COL1A2-210ENST00000488298 DNAH14Q0VDD8 3507 aa12.84□□□□□ -0.35
COL1A2-210ENST00000488298 SLC38A8A6NNN8 435 aa12.84□□□□□ -0.35
COL1A2-210ENST00000488298 DPYSL4O14531 572 aa12.84□□□□□ -0.35
COL1A2-210ENST00000488298 PTPN1P18031 435 aaKnown RBP12.84□□□□□ -0.35
COL1A2-210ENST00000488298 RAP1GAPP47736 663 aa12.84□□□□□ -0.35
COL1A2-210ENST00000488298 CACNA2D1P54289 1103 aa12.84□□□□□ -0.35
COL1A2-210ENST00000488298 STX17P56962 302 aa12.84□□□□□ -0.35
COL1A2-210ENST00000488298 PSMC1P62191 440 aaKnown RBP12.84□□□□□ -0.35
COL1A2-210ENST00000488298 TNNC1P63316 161 aa12.84□□□□□ -0.35
COL1A2-210ENST00000488298 FCHO2Q0JRZ9 810 aa12.84□□□□□ -0.35
COL1A2-210ENST00000488298 PAK1Q13153 545 aa12.84□□□□□ -0.35
COL1A2-210ENST00000488298 STIM1Q13586 685 aa12.84□□□□□ -0.35
COL1A2-210ENST00000488298 SIM2Q14190 667 aaPredicted RBP12.84□□□□□ -0.35
COL1A2-210ENST00000488298 KLHL10Q6JEL2 608 aa12.84□□□□□ -0.35
COL1A2-210ENST00000488298 CRYBG2Q8N1P7 616 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms