RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 MAGED2Q9UNF1 606 aaPredicted RBP11.71□□□□□ -0.53
UBE4B-210ENST00000488228 CNTN6Q9UQ52 1028 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 FAM50BQ9Y247 325 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 MYO10Q9HD67 2058 aa11.71□□□□□ -0.54
UBE4B-210ENST00000488228 M0QYV0 167 aa11.7□□□□□ -0.54
UBE4B-210ENST00000488228 FOXN3O00409 490 aaPredicted RBP11.7□□□□□ -0.54
UBE4B-210ENST00000488228 THAP12O43422 761 aa11.7□□□□□ -0.54
UBE4B-210ENST00000488228 VDRP11473 427 aa11.7□□□□□ -0.54
UBE4B-210ENST00000488228 BMP1P13497 986 aa11.7□□□□□ -0.54
UBE4B-210ENST00000488228 HMGA1P17096 107 aaKnown RBP11.7□□□□□ -0.54
UBE4B-210ENST00000488228 NPR3P17342 541 aa11.7□□□□□ -0.54
UBE4B-210ENST00000488228 PTPN2P17706 415 aa11.7□□□□□ -0.54
UBE4B-210ENST00000488228 FSHRP23945 695 aa11.7□□□□□ -0.54
UBE4B-210ENST00000488228 GNA15P30679 374 aa11.7□□□□□ -0.54
UBE4B-210ENST00000488228 EPHA5P54756 1037 aa11.7□□□□□ -0.54
UBE4B-210ENST00000488228 UBASH3AP57075 661 aa11.7□□□□□ -0.54
UBE4B-210ENST00000488228 JAM2P57087 298 aa11.7□□□□□ -0.54
UBE4B-210ENST00000488228 TAF12Q16514 161 aa11.7□□□□□ -0.54
UBE4B-210ENST00000488228 PRSS36Q5K4E3 855 aa11.7□□□□□ -0.54
UBE4B-210ENST00000488228 CYP26C1Q6V0L0 522 aa11.7□□□□□ -0.54
UBE4B-210ENST00000488228 PDZD4Q76G19 769 aaPredicted RBP11.7□□□□□ -0.54
UBE4B-210ENST00000488228 DNAJB7Q7Z6W7 309 aaPredicted RBP11.7□□□□□ -0.54
UBE4B-210ENST00000488228 SHKBP1Q8TBC3 707 aa11.7□□□□□ -0.54
UBE4B-210ENST00000488228 RPGRIP1Q96KN7 1286 aa11.7□□□□□ -0.54
UBE4B-210ENST00000488228 C8orf48Q96LL4 319 aa11.7□□□□□ -0.54
UBE4B-210ENST00000488228 LRRC3Q9BY71 257 aa11.7□□□□□ -0.54
UBE4B-210ENST00000488228 XPO4Q9C0E2 1151 aaKnown RBP11.7□□□□□ -0.54
UBE4B-210ENST00000488228 IL21Q9HBE4 155 aa11.7□□□□□ -0.54
UBE4B-210ENST00000488228 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.7□□□□□ -0.54
UBE4B-210ENST00000488228 MRPS23Q9Y3D9 190 aaKnown RBP11.7□□□□□ -0.54
UBE4B-210ENST00000488228 ASB3Q9Y575 518 aa11.7□□□□□ -0.54
UBE4B-210ENST00000488228 CUL9Q8IWT3 2517 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 A0A1W2PQC6 194 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 A0A1W2PRU2 124 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 C2CD4DB7Z1M9 353 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 TULP2O00295 520 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 MOSPD3O75425 235 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 TADA3O75528 432 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 GFPT2O94808 682 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 MICAL2O94851 1124 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 CFHP08603 1231 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 CSH1P0DML2 217 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 CSH2P0DML3 217 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 GABRR2P28476 465 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 GBP2P32456 591 aaPredicted RBP11.69□□□□□ -0.54
UBE4B-210ENST00000488228 PBX1P40424 430 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 SLC5A3P53794 718 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 BCAT1P54687 386 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 CYP4F8P98187 520 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 ZP2Q05996 745 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 NR1I3Q14994 352 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 TJAP1Q5JTD0 557 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 STXBP5Q5T5C0 1151 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 DENND5BQ6ZUT9 1274 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 GAREM2Q75VX8 874 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 SLC47A2Q86VL8 602 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 NPAS3Q8IXF0 933 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 FAM71AQ8IYT1 594 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 TDRD5Q8NAT2 981 aaKnown RBP11.69□□□□□ -0.54
UBE4B-210ENST00000488228 ST13P5Q8NFI4 369 aaPredicted RBP11.69□□□□□ -0.54
UBE4B-210ENST00000488228 UBA3Q8TBC4 463 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 SPATA17Q96L03 361 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 MYADMQ96S97 322 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 PHF7Q9BWX1 381 aaPredicted RBP11.69□□□□□ -0.54
UBE4B-210ENST00000488228 DUSP16Q9BY84 665 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 CSNK1G1Q9HCP0 422 aa11.69□□□□□ -0.54
UBE4B-210ENST00000488228 TICRRQ7Z2Z1 1910 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 FAM170AA1A519 330 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 HHLA1C9JL84 531 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 AP5Z1O43299 807 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 CLCN1P35523 988 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 PLCB2Q00722 1185 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 PDE4CQ08493 712 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 BST2Q10589 180 aaKnown RBP11.68□□□□□ -0.54
UBE4B-210ENST00000488228 TEAD2Q15562 447 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 CYP4A22Q5TCH4 519 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 DENND1BQ6P3S1 775 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 POTEHQ6S545 545 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 LCLAT1Q6UWP7 414 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 TMEM150AQ86TG1 271 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 PIGZQ86VD9 579 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 PASD1Q8IV76 773 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 ADHFE1Q8IWW8 467 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 ANKRD52Q8NB46 1076 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 LEMD2Q8NC56 503 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 SCAMP5Q8TAC9 235 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 ADAMTS19Q8TE59 1207 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 FGF13Q92913 245 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 SECISBP2LQ93073 1101 aaKnown RBP11.68□□□□□ -0.54
UBE4B-210ENST00000488228 TRMT2BQ96GJ1 504 aaKnown RBP11.68□□□□□ -0.54
UBE4B-210ENST00000488228 GCNAQ96QF7 691 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 SPAG5Q96R06 1193 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 TTLL2Q9BWV7 592 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 STK33Q9BYT3 514 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 AVENQ9NQS1 362 aaPredicted RBP11.68□□□□□ -0.54
UBE4B-210ENST00000488228 HESX1Q9UBX0 185 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 COL4A3Q01955 1670 aa11.68□□□□□ -0.54
UBE4B-210ENST00000488228 COL4A2P08572 1712 aa11.67□□□□□ -0.54
UBE4B-210ENST00000488228 TNFRSF10BO14763 440 aa11.67□□□□□ -0.54
UBE4B-210ENST00000488228 SOX5P35711 763 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms