RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 CYP4A11Q02928 519 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 SSRP1Q08945 709 aaKnown RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 GRSF1Q12849 480 aaKnown RBP eCLIP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 VEPH1Q14D04 833 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 NFE2Q16621 373 aaPredicted RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 MAPK6Q16659 721 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 DUOXA1Q1HG43 343 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 PAN2Q504Q3 1202 aaKnown RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 STPG1Q5TH74 334 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 SLFN12LQ6IEE8 588 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 KLHDC10Q6PID8 442 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 LRSAM1Q6UWE0 723 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 CWC27Q6UX04 472 aaKnown RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 CD300LGQ6UXG3 332 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 PDZD4Q76G19 769 aaPredicted RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 GALNT15Q8N3T1 639 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 TTC39CQ8N584 583 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 UBR7Q8N806 425 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 ATP2A3Q93084 1043 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 SEC16BQ96JE7 1060 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 IFT74Q96LB3 600 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 ZNF512Q96ME7 567 aaPredicted RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 FDXACB1Q9BRP7 624 aaPredicted RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 FOXP1Q9H334 677 aaPredicted RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 RETREG1Q9H6L5 497 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 PARD6AQ9NPB6 346 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 TMEM9BQ9NQ34 198 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 PPP4R2Q9NY27 417 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 TBC1D14Q9P2M4 693 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 DDX25Q9UHL0 483 aaKnown RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 MTUS1Q9ULD2 1270 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 SCML1Q9UN30 329 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 ARHGAP26Q9UNA1 814 aa2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 MRPS23Q9Y3D9 190 aaKnown RBP2.96□□□□□ -1.94
DEPDC1-203ENST00000488146 TICRRQ7Z2Z1 1910 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 MUC22E2RYF6 1773 aaPredicted RBP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 ANO9A1A5B4 782 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 SPECC1L-ADORA2AF8WAN1 911 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 ABLIM1O14639 778 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 TOR1BO14657 336 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 DNAJA2O60884 412 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 ZC3H11AO75152 810 aaKnown RBP eCLIP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 NFATC1O95644 943 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 VTNP04004 478 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 RHOP08100 348 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 ODC1P11926 461 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 HNRNPLP14866 589 aaKnown RBP eCLIP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 ELF1P32519 619 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 GATMP50440 423 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 AP3M2P53677 418 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 NCKAP1LP55160 1127 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 HAND2P61296 217 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 ZBTB16Q05516 673 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 SQSTM1Q13501 440 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 ENPP2Q13822 863 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 CAPSQ13938 189 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 SIM2Q14190 667 aaPredicted RBP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 POSTNQ15063 836 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 NPY5RQ15761 445 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 PLK5Q496M5 336 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 ACBD5Q5T8D3 534 aaPredicted RBP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 ARL6IP4Q66PJ3 421 aaKnown RBP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 MRM1Q6IN84 353 aaKnown RBP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 FAM117BQ6P1L5 589 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 MPZL3Q6UWV2 235 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 VSTM1Q6UX27 236 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 SYT9Q86SS6 491 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 FAM35AQ86V20 835 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 MON1AQ86VX9 555 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 HOMER1Q86YM7 354 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 TRIM42Q8IWZ5 723 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 YAF2Q8IY57 180 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 TOP6BLQ8N6T0 577 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 C12orf50Q8NA57 414 aaPredicted RBP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 OTUD7AQ8TE49 926 aaPredicted RBP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 PRPF31Q8WWY3 499 aaKnown RBP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 ZNF560Q96MR9 790 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 FAM83CQ9BQN1 747 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 NT5C1AQ9BXI3 368 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 SLC2A11Q9BYW1 496 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 GTPBP4Q9BZE4 634 aaKnown RBP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 UBXN6Q9BZV1 441 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 MIR1-1HGQ9H1L0 117 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 PNPLA8Q9NP80 782 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 XPNPEP1Q9NQW7 623 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 GDAP2Q9NXN4 497 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 DNAJB12Q9NXW2 375 aaKnown RBP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 IL37Q9NZH6 218 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 MMP17Q9ULZ9 603 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 POLR3KQ9Y2Y1 108 aaPredicted RBP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 PCDHB14Q9Y5E9 798 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 PCDHGC4Q9Y5F7 938 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 ATP8B3O60423 1300 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 UTRNP46939 3433 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 TEX51A0A1B0GUA7 166 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 PTGESO14684 152 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 TIMM44O43615 452 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 PI15O43692 258 aa2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 RPP40O75818 363 aaKnown RBP2.95□□□□□ -1.94
DEPDC1-203ENST00000488146 GJB6O95452 261 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms