RNA–Protein interactions for RNA: ENST00000487548.2

SENP6-210, Transcript of SUMO specific peptidase 6, humanhuman

TSL 2

Gene SENP6, Length 427 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-210ENST00000487548 ADAMTS18Q8TE60 1221 aa3.72□□□□□ -1.81
SENP6-210ENST00000487548 DDX17Q92841 729 aaKnown RBP3.72□□□□□ -1.81
SENP6-210ENST00000487548 MAP4K1Q92918 833 aa3.72□□□□□ -1.81
SENP6-210ENST00000487548 CCDC17Q96LX7 622 aa3.72□□□□□ -1.81
SENP6-210ENST00000487548 FYTTD1Q96QD9 318 aaKnown RBP3.72□□□□□ -1.81
SENP6-210ENST00000487548 THAP7Q9BT49 309 aaPredicted RBP3.72□□□□□ -1.81
SENP6-210ENST00000487548 FEZ2Q9UHY8 353 aaPredicted RBP3.72□□□□□ -1.81
SENP6-210ENST00000487548 NDRG4Q9ULP0 352 aaKnown RBP3.72□□□□□ -1.81
SENP6-210ENST00000487548 PCDHA1Q9Y5I3 950 aa3.72□□□□□ -1.81
SENP6-210ENST00000487548 ZMYM2Q9UBW7 1377 aa3.72□□□□□ -1.81
SENP6-210ENST00000487548 TCF20Q9UGU0 1960 aaKnown RBP3.71□□□□□ -1.82
SENP6-210ENST00000487548 LACTBL1A8MY62 500 aa3.71□□□□□ -1.82
SENP6-210ENST00000487548 PCDHGA12O60330 932 aa3.71□□□□□ -1.82
SENP6-210ENST00000487548 MYBL2P10244 700 aa3.71□□□□□ -1.82
SENP6-210ENST00000487548 MASP1P48740 699 aa3.71□□□□□ -1.82
SENP6-210ENST00000487548 CYP1B1Q16678 543 aa3.71□□□□□ -1.82
SENP6-210ENST00000487548 LY6KQ17RY6 165 aa3.71□□□□□ -1.82
SENP6-210ENST00000487548 HEATR3Q7Z4Q2 680 aa3.71□□□□□ -1.82
SENP6-210ENST00000487548 BCDIN3DQ7Z5W3 292 aaKnown RBP3.71□□□□□ -1.82
SENP6-210ENST00000487548 PIP4P1Q86T03 277 aa3.71□□□□□ -1.82
SENP6-210ENST00000487548 CAND1Q86VP6 1230 aaKnown RBP3.71□□□□□ -1.82
SENP6-210ENST00000487548 PPP1R3BQ86XI6 285 aa3.71□□□□□ -1.82
SENP6-210ENST00000487548 DCP1BQ8IZD4 617 aaKnown RBP3.71□□□□□ -1.82
SENP6-210ENST00000487548 OSCP1Q8WVF1 389 aa3.71□□□□□ -1.82
SENP6-210ENST00000487548 TEKT5Q96M29 485 aa3.71□□□□□ -1.82
SENP6-210ENST00000487548 CAMK1GQ96NX5 476 aa3.71□□□□□ -1.82
SENP6-210ENST00000487548 PUS7Q96PZ0 661 aaKnown RBP3.71□□□□□ -1.82
SENP6-210ENST00000487548 ZPBPQ9BS86 351 aa3.71□□□□□ -1.82
SENP6-210ENST00000487548 MRPL46Q9H2W6 279 aaKnown RBP3.71□□□□□ -1.82
SENP6-210ENST00000487548 ASIC5Q9NY37 505 aa3.71□□□□□ -1.82
SENP6-210ENST00000487548 LPAR3Q9UBY5 353 aa3.71□□□□□ -1.82
SENP6-210ENST00000487548 PCDHGA9Q9Y5G4 932 aaKnown RBP3.71□□□□□ -1.82
SENP6-210ENST00000487548 PCDHGA8Q9Y5G5 932 aa3.71□□□□□ -1.82
SENP6-210ENST00000487548 PCDHGA7Q9Y5G6 932 aa3.71□□□□□ -1.82
SENP6-210ENST00000487548 PCDHGA6Q9Y5G7 932 aa3.71□□□□□ -1.82
SENP6-210ENST00000487548 PCDHGA3Q9Y5H0 932 aa3.71□□□□□ -1.82
SENP6-210ENST00000487548 HS3ST3B1Q9Y662 390 aa3.71□□□□□ -1.82
SENP6-210ENST00000487548 CES2O00748 559 aa3.7□□□□□ -1.82
SENP6-210ENST00000487548 GAS8-AS1O95177 125 aa3.7□□□□□ -1.82
SENP6-210ENST00000487548 UNC5CO95185 931 aa3.7□□□□□ -1.82
SENP6-210ENST00000487548 TOMM40O96008 361 aa3.7□□□□□ -1.82
SENP6-210ENST00000487548 COPB1P53618 953 aaKnown RBP3.7□□□□□ -1.82
SENP6-210ENST00000487548 C18orf65Q6ZTR6 163 aa3.7□□□□□ -1.82
SENP6-210ENST00000487548 PELI3Q8N2H9 469 aa3.7□□□□□ -1.82
SENP6-210ENST00000487548 SOCS4Q8WXH5 440 aa3.7□□□□□ -1.82
SENP6-210ENST00000487548 FAXDC2Q96IV6 333 aa3.7□□□□□ -1.82
SENP6-210ENST00000487548 PRR25Q96S07 402 aa3.7□□□□□ -1.82
SENP6-210ENST00000487548 FAM126AQ9BYI3 521 aaPredicted RBP3.7□□□□□ -1.82
SENP6-210ENST00000487548 ZDHHC8Q9ULC8 765 aa3.7□□□□□ -1.82
SENP6-210ENST00000487548 K7ESF4 209 aa3.69□□□□□ -1.82
SENP6-210ENST00000487548 ERC2O15083 957 aa3.69□□□□□ -1.82
SENP6-210ENST00000487548 TLR2O60603 784 aa3.69□□□□□ -1.82
SENP6-210ENST00000487548 TULP3O75386 442 aa3.69□□□□□ -1.82
SENP6-210ENST00000487548 TJP3O95049 919 aa3.69□□□□□ -1.82
SENP6-210ENST00000487548 FTH1P19P0C7X4 201 aa3.69□□□□□ -1.82
SENP6-210ENST00000487548 PDE6CP51160 858 aa3.69□□□□□ -1.82
SENP6-210ENST00000487548 PSG6Q00889 435 aa3.69□□□□□ -1.82
SENP6-210ENST00000487548 NOGQ13253 232 aa3.69□□□□□ -1.82
SENP6-210ENST00000487548 KRTAP5-1Q6L8H4 278 aa3.69□□□□□ -1.82
SENP6-210ENST00000487548 TMEM65Q6PI78 240 aa3.69□□□□□ -1.82
SENP6-210ENST00000487548 CBARPQ8N350 705 aaPredicted RBP3.69□□□□□ -1.82
SENP6-210ENST00000487548 ARFGAP1Q8N6T3 406 aa3.69□□□□□ -1.82
SENP6-210ENST00000487548 LMLNQ96KR4 655 aa3.69□□□□□ -1.82
SENP6-210ENST00000487548 WDCPQ9H6R7 721 aa3.69□□□□□ -1.82
SENP6-210ENST00000487548 MLXIPQ9HAP2 919 aa3.69□□□□□ -1.82
SENP6-210ENST00000487548 POLHQ9Y253 713 aa3.69□□□□□ -1.82
SENP6-210ENST00000487548 MRFAP1Q9Y605 127 aa3.69□□□□□ -1.82
SENP6-210ENST00000487548 C4orf47A7E2U8 309 aa3.68□□□□□ -1.82
SENP6-210ENST00000487548 PRKCBP05771 671 aa3.68□□□□□ -1.82
SENP6-210ENST00000487548 GRPP07492 148 aa3.68□□□□□ -1.82
SENP6-210ENST00000487548 HDCP19113 662 aa3.68□□□□□ -1.82
SENP6-210ENST00000487548 MLC1Q15049 377 aa3.68□□□□□ -1.82
SENP6-210ENST00000487548 PCBP2Q15366 365 aaKnown RBP eCLIP3.68□□□□□ -1.82
SENP6-210ENST00000487548 SEC23BQ15437 767 aa3.68□□□□□ -1.82
SENP6-210ENST00000487548 TMTC4Q5T4D3 741 aa3.68□□□□□ -1.82
SENP6-210ENST00000487548 NPM2Q86SE8 214 aaKnown RBP3.68□□□□□ -1.82
SENP6-210ENST00000487548 PNISRQ8TF01 805 aaKnown RBP3.68□□□□□ -1.82
SENP6-210ENST00000487548 TMEM171Q8WVE6 324 aa3.68□□□□□ -1.82
SENP6-210ENST00000487548 CXorf36Q9H7Y0 433 aa3.68□□□□□ -1.82
SENP6-210ENST00000487548 MRPL44Q9H9J2 332 aaKnown RBP3.68□□□□□ -1.82
SENP6-210ENST00000487548 LMBRD1Q9NUN5 540 aa3.68□□□□□ -1.82
SENP6-210ENST00000487548 SLC5A4Q9NY91 659 aa3.68□□□□□ -1.82
SENP6-210ENST00000487548 AMFRQ9UKV5 643 aa3.68□□□□□ -1.82
SENP6-210ENST00000487548 GABRQQ9UN88 632 aa3.68□□□□□ -1.82
SENP6-210ENST00000487548 IFITM10A6NMD0 228 aa3.67□□□□□ -1.82
SENP6-210ENST00000487548 FGAP02671 866 aa3.67□□□□□ -1.82
SENP6-210ENST00000487548 FTLP02792 175 aaPredicted RBP3.67□□□□□ -1.82
SENP6-210ENST00000487548 CSF1RP07333 972 aa3.67□□□□□ -1.82
SENP6-210ENST00000487548 YPEL5P62699 121 aa3.67□□□□□ -1.82
SENP6-210ENST00000487548 KRT17Q04695 432 aa3.67□□□□□ -1.82
SENP6-210ENST00000487548 AMOTQ4VCS5 1084 aa3.67□□□□□ -1.82
SENP6-210ENST00000487548 CC2D1BQ5T0F9 858 aaKnown RBP3.67□□□□□ -1.82
SENP6-210ENST00000487548 MTHFD1LQ6UB35 978 aa3.67□□□□□ -1.82
SENP6-210ENST00000487548 PNMA8AQ86V59 439 aaPredicted RBP3.67□□□□□ -1.82
SENP6-210ENST00000487548 ZNF280BQ86YH2 543 aa3.67□□□□□ -1.82
SENP6-210ENST00000487548 ADHFE1Q8IWW8 467 aa3.67□□□□□ -1.82
SENP6-210ENST00000487548 IZUMO1Q8IYV9 350 aa3.67□□□□□ -1.82
SENP6-210ENST00000487548 SIRT6Q8N6T7 355 aa3.67□□□□□ -1.82
SENP6-210ENST00000487548 ASB5Q8WWX0 329 aa3.67□□□□□ -1.82
SENP6-210ENST00000487548 SHOC2Q9UQ13 582 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms